Incidental Mutation 'R4859:Rapgef6'
ID |
372343 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Rapgef6
|
Ensembl Gene |
ENSMUSG00000037533 |
Gene Name |
Rap guanine nucleotide exchange factor (GEF) 6 |
Synonyms |
PDZ-GEF2, C030018K18Rik, Pdzgef2, RA-GEF-2 |
MMRRC Submission |
042470-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R4859 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
11 |
Chromosomal Location |
54413673-54590111 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to G
at 54526989 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Glutamic Acid to Glycine
at position 413
(E413G)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000151509
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000094536]
[ENSMUST00000101206]
[ENSMUST00000102743]
[ENSMUST00000108894]
[ENSMUST00000108895]
[ENSMUST00000207429]
[ENSMUST00000218995]
|
AlphaFold |
Q5NCJ1 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000094536
AA Change: E275G
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
SMART Domains |
Protein: ENSMUSP00000092114 Gene: ENSMUSG00000037533 AA Change: E275G
Domain | Start | End | E-Value | Type |
cNMP
|
1 |
113 |
6.64e-7 |
SMART |
RasGEFN
|
127 |
240 |
4.35e-33 |
SMART |
PDZ
|
255 |
327 |
8.86e-16 |
SMART |
low complexity region
|
409 |
420 |
N/A |
INTRINSIC |
RA
|
464 |
550 |
1.47e-20 |
SMART |
RasGEF
|
571 |
853 |
3.88e-84 |
SMART |
low complexity region
|
944 |
957 |
N/A |
INTRINSIC |
low complexity region
|
972 |
989 |
N/A |
INTRINSIC |
low complexity region
|
1016 |
1061 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000101206
AA Change: E560G
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
SMART Domains |
Protein: ENSMUSP00000098766 Gene: ENSMUSG00000037533 AA Change: E560G
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
10 |
82 |
1.45e-5 |
PROSPERO |
low complexity region
|
187 |
205 |
N/A |
INTRINSIC |
low complexity region
|
231 |
239 |
N/A |
INTRINSIC |
cNMP
|
280 |
398 |
4.8e-13 |
SMART |
RasGEFN
|
412 |
525 |
4.35e-33 |
SMART |
PDZ
|
540 |
612 |
8.86e-16 |
SMART |
low complexity region
|
694 |
705 |
N/A |
INTRINSIC |
RA
|
749 |
835 |
1.47e-20 |
SMART |
RasGEF
|
856 |
1095 |
5.35e-87 |
SMART |
low complexity region
|
1237 |
1250 |
N/A |
INTRINSIC |
low complexity region
|
1270 |
1293 |
N/A |
INTRINSIC |
low complexity region
|
1345 |
1364 |
N/A |
INTRINSIC |
low complexity region
|
1368 |
1380 |
N/A |
INTRINSIC |
low complexity region
|
1444 |
1452 |
N/A |
INTRINSIC |
low complexity region
|
1555 |
1568 |
N/A |
INTRINSIC |
low complexity region
|
1591 |
1604 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000102743
AA Change: E560G
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
SMART Domains |
Protein: ENSMUSP00000099804 Gene: ENSMUSG00000037533 AA Change: E560G
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
10 |
82 |
1.42e-5 |
PROSPERO |
low complexity region
|
187 |
205 |
N/A |
INTRINSIC |
low complexity region
|
231 |
239 |
N/A |
INTRINSIC |
cNMP
|
280 |
398 |
4.8e-13 |
SMART |
RasGEFN
|
412 |
525 |
4.35e-33 |
SMART |
PDZ
|
540 |
612 |
8.86e-16 |
SMART |
low complexity region
|
694 |
705 |
N/A |
INTRINSIC |
RA
|
749 |
835 |
1.47e-20 |
SMART |
RasGEF
|
856 |
1138 |
3.88e-84 |
SMART |
low complexity region
|
1229 |
1242 |
N/A |
INTRINSIC |
low complexity region
|
1262 |
1285 |
N/A |
INTRINSIC |
low complexity region
|
1337 |
1356 |
N/A |
INTRINSIC |
low complexity region
|
1360 |
1372 |
N/A |
INTRINSIC |
low complexity region
|
1436 |
1444 |
N/A |
INTRINSIC |
low complexity region
|
1547 |
1560 |
N/A |
INTRINSIC |
low complexity region
|
1583 |
1596 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000108894
AA Change: E275G
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
SMART Domains |
Protein: ENSMUSP00000104522 Gene: ENSMUSG00000037533 AA Change: E275G
Domain | Start | End | E-Value | Type |
cNMP
|
1 |
113 |
6.64e-7 |
SMART |
RasGEFN
|
127 |
240 |
4.35e-33 |
SMART |
PDZ
|
255 |
327 |
8.86e-16 |
SMART |
low complexity region
|
409 |
420 |
N/A |
INTRINSIC |
RA
|
464 |
550 |
1.47e-20 |
SMART |
RasGEF
|
571 |
810 |
5.35e-87 |
SMART |
low complexity region
|
952 |
965 |
N/A |
INTRINSIC |
low complexity region
|
980 |
997 |
N/A |
INTRINSIC |
low complexity region
|
1024 |
1069 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000108895
|
SMART Domains |
Protein: ENSMUSP00000104523 Gene: ENSMUSG00000037533
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
10 |
82 |
1.95e-5 |
PROSPERO |
low complexity region
|
187 |
205 |
N/A |
INTRINSIC |
low complexity region
|
231 |
239 |
N/A |
INTRINSIC |
cNMP
|
280 |
398 |
4.8e-13 |
SMART |
RasGEFN
|
412 |
526 |
1.03e-25 |
SMART |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000149372
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000207429
AA Change: E560G
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000218995
AA Change: E413G
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000220269
|
Meta Mutation Damage Score |
0.0898 |
Coding Region Coverage |
- 1x: 98.9%
- 3x: 98.1%
- 10x: 95.5%
- 20x: 89.5%
|
Validation Efficiency |
100% (112/112) |
MGI Phenotype |
PHENOTYPE: Mice homozygous for a null allele exhibit an inlarged spleen, increased IgE and IgG levels and altered cytokine production. [provided by MGI curators]
|
Allele List at MGI |
All alleles(16) : Targeted, knock-out(1) Targeted, other(2) Gene trapped(13) |
Other mutations in this stock |
Total: 86 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Adam25 |
T |
A |
8: 41,207,580 (GRCm39) |
V282E |
probably benign |
Het |
Adam26b |
T |
C |
8: 43,973,296 (GRCm39) |
T569A |
possibly damaging |
Het |
Adam6a |
A |
G |
12: 113,509,609 (GRCm39) |
N661D |
probably damaging |
Het |
Adck1 |
G |
A |
12: 88,407,865 (GRCm39) |
A199T |
probably benign |
Het |
Adhfe1 |
A |
G |
1: 9,628,438 (GRCm39) |
Y270C |
probably damaging |
Het |
Aldh16a1 |
C |
T |
7: 44,796,731 (GRCm39) |
R256H |
probably benign |
Het |
Ap5z1 |
T |
C |
5: 142,459,748 (GRCm39) |
M466T |
possibly damaging |
Het |
Aspm |
C |
T |
1: 139,397,131 (GRCm39) |
L908F |
probably damaging |
Het |
Atp8b2 |
T |
A |
3: 89,853,287 (GRCm39) |
T743S |
probably benign |
Het |
Bag2 |
G |
T |
1: 33,786,022 (GRCm39) |
T100K |
probably damaging |
Het |
Camk2a |
A |
G |
18: 61,076,246 (GRCm39) |
|
probably benign |
Het |
Ccdc158 |
A |
G |
5: 92,781,262 (GRCm39) |
Y848H |
probably damaging |
Het |
Ccp110 |
T |
G |
7: 118,324,653 (GRCm39) |
V725G |
possibly damaging |
Het |
Cdh6 |
A |
G |
15: 13,051,418 (GRCm39) |
V405A |
probably benign |
Het |
Ces2g |
T |
C |
8: 105,694,094 (GRCm39) |
|
probably null |
Het |
Cfap157 |
A |
G |
2: 32,667,554 (GRCm39) |
F510L |
probably benign |
Het |
Chd3 |
A |
T |
11: 69,250,722 (GRCm39) |
M669K |
possibly damaging |
Het |
Cnot10 |
C |
T |
9: 114,456,532 (GRCm39) |
A168T |
probably damaging |
Het |
Crybg1 |
A |
G |
10: 43,868,565 (GRCm39) |
V1371A |
probably damaging |
Het |
Dars2 |
A |
G |
1: 160,872,560 (GRCm39) |
L547P |
probably damaging |
Het |
Dis3 |
A |
G |
14: 99,325,226 (GRCm39) |
C483R |
probably damaging |
Het |
Dnah7b |
T |
A |
1: 46,395,762 (GRCm39) |
L3888Q |
probably damaging |
Het |
Dpysl2 |
A |
T |
14: 67,066,888 (GRCm39) |
Y182N |
probably damaging |
Het |
Eif4g1 |
T |
A |
16: 20,500,923 (GRCm39) |
F509L |
probably benign |
Het |
Evc |
T |
C |
5: 37,458,253 (GRCm39) |
T85A |
probably damaging |
Het |
Farsb |
T |
C |
1: 78,444,609 (GRCm39) |
T283A |
probably benign |
Het |
Fem1al |
G |
T |
11: 29,775,178 (GRCm39) |
A93E |
probably damaging |
Het |
Fgf14 |
C |
A |
14: 124,429,845 (GRCm39) |
R30L |
possibly damaging |
Het |
Gbe1 |
T |
C |
16: 70,275,289 (GRCm39) |
L363P |
probably damaging |
Het |
Gcg |
A |
G |
2: 62,307,189 (GRCm39) |
V124A |
probably damaging |
Het |
Glb1l |
A |
G |
1: 75,176,963 (GRCm39) |
|
probably benign |
Het |
Gm5431 |
T |
C |
11: 48,780,409 (GRCm39) |
E449G |
probably damaging |
Het |
Gon4l |
T |
C |
3: 88,802,655 (GRCm39) |
S1089P |
probably benign |
Het |
Hgd |
T |
C |
16: 37,409,111 (GRCm39) |
L25P |
probably damaging |
Het |
Hnf1a |
T |
C |
5: 115,093,311 (GRCm39) |
H318R |
possibly damaging |
Het |
Hsd17b7 |
A |
C |
1: 169,794,826 (GRCm39) |
V71G |
possibly damaging |
Het |
Hydin |
T |
C |
8: 111,233,126 (GRCm39) |
S1742P |
possibly damaging |
Het |
Insyn2b |
A |
G |
11: 34,353,154 (GRCm39) |
S399G |
probably benign |
Het |
Kank2 |
T |
C |
9: 21,691,078 (GRCm39) |
E552G |
probably benign |
Het |
Kcnq4 |
C |
A |
4: 120,573,810 (GRCm39) |
R217L |
probably damaging |
Het |
Klrg2 |
T |
C |
6: 38,604,540 (GRCm39) |
*201W |
probably null |
Het |
Kndc1 |
T |
C |
7: 139,501,821 (GRCm39) |
S953P |
probably benign |
Het |
Lama2 |
TTTGCGCATT |
TTT |
10: 26,919,639 (GRCm39) |
|
probably null |
Het |
Lonp1 |
A |
G |
17: 56,933,587 (GRCm39) |
V96A |
probably benign |
Het |
Mgat4e |
T |
C |
1: 134,469,478 (GRCm39) |
K189E |
possibly damaging |
Het |
Msantd5f8 |
A |
G |
4: 73,805,457 (GRCm39) |
S351P |
probably damaging |
Het |
Msh2 |
G |
A |
17: 88,026,187 (GRCm39) |
V722I |
possibly damaging |
Het |
Mtcl3 |
A |
C |
10: 29,026,390 (GRCm39) |
M491L |
probably benign |
Het |
N4bp2 |
T |
C |
5: 65,982,641 (GRCm39) |
Y1632H |
probably damaging |
Het |
Nlrc4 |
T |
G |
17: 74,743,032 (GRCm39) |
K862T |
probably damaging |
Het |
Notch4 |
A |
T |
17: 34,806,154 (GRCm39) |
Q1750L |
probably damaging |
Het |
Obscn |
C |
T |
11: 58,972,849 (GRCm39) |
V2066I |
possibly damaging |
Het |
Or2v2 |
T |
C |
11: 49,003,993 (GRCm39) |
K187E |
probably damaging |
Het |
Or4c15 |
T |
A |
2: 88,760,627 (GRCm39) |
I11L |
probably benign |
Het |
Or4f14b |
A |
T |
2: 111,775,156 (GRCm39) |
I215N |
probably damaging |
Het |
Or52d13 |
A |
T |
7: 103,110,243 (GRCm39) |
Y57* |
probably null |
Het |
Or5m8 |
T |
C |
2: 85,823,075 (GRCm39) |
S305P |
probably damaging |
Het |
Pde7a |
T |
A |
3: 19,295,655 (GRCm39) |
|
probably benign |
Het |
Pign |
A |
T |
1: 105,575,892 (GRCm39) |
Y249* |
probably null |
Het |
Ppp1r17 |
A |
T |
6: 56,003,449 (GRCm39) |
E87D |
probably damaging |
Het |
Prss3 |
T |
A |
6: 41,350,857 (GRCm39) |
Q211L |
probably damaging |
Het |
Rnf150 |
A |
G |
8: 83,590,712 (GRCm39) |
H25R |
probably damaging |
Het |
Scamp2 |
T |
C |
9: 57,488,934 (GRCm39) |
|
probably null |
Het |
Scap |
T |
A |
9: 110,203,410 (GRCm39) |
|
probably benign |
Het |
Sdc2 |
A |
C |
15: 33,032,602 (GRCm39) |
K175N |
probably damaging |
Het |
Serpinb6d |
T |
A |
13: 33,851,547 (GRCm39) |
|
probably null |
Het |
Sh3tc2 |
A |
G |
18: 62,146,164 (GRCm39) |
N1181S |
probably benign |
Het |
Slc44a2 |
T |
C |
9: 21,259,441 (GRCm39) |
I46T |
probably damaging |
Het |
Slfn8 |
A |
G |
11: 82,908,540 (GRCm39) |
M1T |
probably null |
Het |
Slitrk6 |
T |
C |
14: 110,989,315 (GRCm39) |
T131A |
probably damaging |
Het |
Spata1 |
C |
G |
3: 146,175,529 (GRCm39) |
D326H |
probably damaging |
Het |
Tbck |
T |
G |
3: 132,507,288 (GRCm39) |
S753R |
probably benign |
Het |
Tdp1 |
A |
G |
12: 99,876,070 (GRCm39) |
I340M |
probably benign |
Het |
Tmprss6 |
T |
A |
15: 78,330,877 (GRCm39) |
Y50F |
probably damaging |
Het |
Trank1 |
T |
A |
9: 111,194,078 (GRCm39) |
S701T |
probably benign |
Het |
Trbv17 |
A |
T |
6: 41,140,223 (GRCm39) |
N26I |
probably benign |
Het |
Trip12 |
A |
T |
1: 84,771,531 (GRCm39) |
S248T |
probably damaging |
Het |
Vmn2r53 |
T |
G |
7: 12,335,330 (GRCm39) |
Q110P |
probably damaging |
Het |
Vmn2r75 |
A |
G |
7: 85,797,611 (GRCm39) |
V734A |
probably benign |
Het |
Wfdc11 |
A |
T |
2: 164,507,415 (GRCm39) |
M14K |
probably null |
Het |
Xcr1 |
T |
A |
9: 123,685,712 (GRCm39) |
M17L |
probably benign |
Het |
Zbtb40 |
A |
G |
4: 136,716,070 (GRCm39) |
I965T |
probably damaging |
Het |
Zfp760 |
A |
T |
17: 21,942,511 (GRCm39) |
H562L |
probably damaging |
Het |
Zfp760 |
A |
T |
17: 21,942,516 (GRCm39) |
R564* |
probably null |
Het |
Znf41-ps |
T |
A |
4: 145,555,283 (GRCm39) |
|
noncoding transcript |
Het |
Zyg11a |
A |
T |
4: 108,067,387 (GRCm39) |
I41N |
probably damaging |
Het |
|
Other mutations in Rapgef6 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00436:Rapgef6
|
APN |
11 |
54,570,091 (GRCm39) |
missense |
probably benign |
0.00 |
IGL00507:Rapgef6
|
APN |
11 |
54,554,935 (GRCm39) |
nonsense |
probably null |
|
IGL00809:Rapgef6
|
APN |
11 |
54,540,126 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00843:Rapgef6
|
APN |
11 |
54,582,099 (GRCm39) |
missense |
probably benign |
0.03 |
IGL00899:Rapgef6
|
APN |
11 |
54,510,844 (GRCm39) |
nonsense |
probably null |
|
IGL01372:Rapgef6
|
APN |
11 |
54,559,437 (GRCm39) |
splice site |
probably benign |
|
IGL01604:Rapgef6
|
APN |
11 |
54,585,389 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01935:Rapgef6
|
APN |
11 |
54,501,668 (GRCm39) |
missense |
possibly damaging |
0.78 |
IGL01991:Rapgef6
|
APN |
11 |
54,443,695 (GRCm39) |
missense |
probably benign |
0.37 |
IGL02243:Rapgef6
|
APN |
11 |
54,567,226 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02407:Rapgef6
|
APN |
11 |
54,567,181 (GRCm39) |
missense |
possibly damaging |
0.91 |
IGL02676:Rapgef6
|
APN |
11 |
54,540,172 (GRCm39) |
unclassified |
probably benign |
|
IGL02934:Rapgef6
|
APN |
11 |
54,516,690 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03076:Rapgef6
|
APN |
11 |
54,516,793 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03110:Rapgef6
|
APN |
11 |
54,586,915 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL03256:Rapgef6
|
APN |
11 |
54,548,255 (GRCm39) |
missense |
probably damaging |
1.00 |
shocker
|
UTSW |
11 |
54,510,842 (GRCm39) |
missense |
probably damaging |
1.00 |
D4216:Rapgef6
|
UTSW |
11 |
54,559,572 (GRCm39) |
splice site |
probably benign |
|
PIT4305001:Rapgef6
|
UTSW |
11 |
54,570,203 (GRCm39) |
missense |
probably damaging |
1.00 |
PIT4366001:Rapgef6
|
UTSW |
11 |
54,582,446 (GRCm39) |
missense |
probably damaging |
0.98 |
R0047:Rapgef6
|
UTSW |
11 |
54,437,204 (GRCm39) |
missense |
possibly damaging |
0.65 |
R0047:Rapgef6
|
UTSW |
11 |
54,437,204 (GRCm39) |
missense |
possibly damaging |
0.65 |
R0125:Rapgef6
|
UTSW |
11 |
54,516,701 (GRCm39) |
nonsense |
probably null |
|
R0189:Rapgef6
|
UTSW |
11 |
54,582,075 (GRCm39) |
missense |
probably benign |
|
R0201:Rapgef6
|
UTSW |
11 |
54,510,767 (GRCm39) |
missense |
probably damaging |
1.00 |
R0505:Rapgef6
|
UTSW |
11 |
54,516,789 (GRCm39) |
missense |
probably benign |
0.00 |
R0524:Rapgef6
|
UTSW |
11 |
54,581,110 (GRCm39) |
missense |
probably benign |
0.32 |
R0853:Rapgef6
|
UTSW |
11 |
54,559,503 (GRCm39) |
missense |
probably damaging |
1.00 |
R1203:Rapgef6
|
UTSW |
11 |
54,582,525 (GRCm39) |
missense |
probably benign |
0.09 |
R1440:Rapgef6
|
UTSW |
11 |
54,517,534 (GRCm39) |
missense |
probably damaging |
1.00 |
R1453:Rapgef6
|
UTSW |
11 |
54,530,553 (GRCm39) |
splice site |
probably null |
|
R1530:Rapgef6
|
UTSW |
11 |
54,552,009 (GRCm39) |
missense |
probably damaging |
1.00 |
R1593:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1620:Rapgef6
|
UTSW |
11 |
54,517,420 (GRCm39) |
missense |
possibly damaging |
0.88 |
R1628:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1629:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1630:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1634:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1640:Rapgef6
|
UTSW |
11 |
54,548,231 (GRCm39) |
missense |
probably damaging |
1.00 |
R1686:Rapgef6
|
UTSW |
11 |
54,582,458 (GRCm39) |
missense |
possibly damaging |
0.81 |
R1722:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1743:Rapgef6
|
UTSW |
11 |
54,567,110 (GRCm39) |
missense |
probably damaging |
1.00 |
R1816:Rapgef6
|
UTSW |
11 |
54,585,314 (GRCm39) |
missense |
probably benign |
|
R1851:Rapgef6
|
UTSW |
11 |
54,533,637 (GRCm39) |
missense |
probably benign |
0.01 |
R1852:Rapgef6
|
UTSW |
11 |
54,533,637 (GRCm39) |
missense |
probably benign |
0.01 |
R1868:Rapgef6
|
UTSW |
11 |
54,437,223 (GRCm39) |
frame shift |
probably null |
|
R1888:Rapgef6
|
UTSW |
11 |
54,551,654 (GRCm39) |
missense |
probably damaging |
1.00 |
R1888:Rapgef6
|
UTSW |
11 |
54,551,654 (GRCm39) |
missense |
probably damaging |
1.00 |
R1942:Rapgef6
|
UTSW |
11 |
54,548,089 (GRCm39) |
missense |
possibly damaging |
0.95 |
R1943:Rapgef6
|
UTSW |
11 |
54,548,089 (GRCm39) |
missense |
possibly damaging |
0.95 |
R2031:Rapgef6
|
UTSW |
11 |
54,443,684 (GRCm39) |
missense |
probably benign |
0.30 |
R2087:Rapgef6
|
UTSW |
11 |
54,522,075 (GRCm39) |
missense |
probably damaging |
1.00 |
R2106:Rapgef6
|
UTSW |
11 |
54,559,512 (GRCm39) |
missense |
probably benign |
0.17 |
R2362:Rapgef6
|
UTSW |
11 |
54,585,098 (GRCm39) |
missense |
probably damaging |
1.00 |
R2484:Rapgef6
|
UTSW |
11 |
54,533,582 (GRCm39) |
missense |
possibly damaging |
0.48 |
R2566:Rapgef6
|
UTSW |
11 |
54,578,537 (GRCm39) |
missense |
possibly damaging |
0.66 |
R2872:Rapgef6
|
UTSW |
11 |
54,552,001 (GRCm39) |
missense |
probably damaging |
1.00 |
R2872:Rapgef6
|
UTSW |
11 |
54,552,001 (GRCm39) |
missense |
probably damaging |
1.00 |
R3744:Rapgef6
|
UTSW |
11 |
54,516,760 (GRCm39) |
missense |
probably benign |
0.40 |
R3848:Rapgef6
|
UTSW |
11 |
54,582,134 (GRCm39) |
missense |
probably damaging |
0.97 |
R4823:Rapgef6
|
UTSW |
11 |
54,585,326 (GRCm39) |
missense |
probably benign |
0.08 |
R4906:Rapgef6
|
UTSW |
11 |
54,443,662 (GRCm39) |
missense |
probably damaging |
1.00 |
R4911:Rapgef6
|
UTSW |
11 |
54,513,143 (GRCm39) |
missense |
probably damaging |
0.97 |
R4937:Rapgef6
|
UTSW |
11 |
54,548,143 (GRCm39) |
missense |
probably damaging |
1.00 |
R5033:Rapgef6
|
UTSW |
11 |
54,582,207 (GRCm39) |
missense |
possibly damaging |
0.92 |
R5249:Rapgef6
|
UTSW |
11 |
54,413,943 (GRCm39) |
missense |
probably benign |
0.19 |
R5304:Rapgef6
|
UTSW |
11 |
54,548,200 (GRCm39) |
missense |
probably benign |
0.01 |
R5656:Rapgef6
|
UTSW |
11 |
54,526,962 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5701:Rapgef6
|
UTSW |
11 |
54,567,220 (GRCm39) |
missense |
possibly damaging |
0.76 |
R5758:Rapgef6
|
UTSW |
11 |
54,559,470 (GRCm39) |
missense |
probably damaging |
1.00 |
R5973:Rapgef6
|
UTSW |
11 |
54,530,609 (GRCm39) |
missense |
probably damaging |
1.00 |
R6177:Rapgef6
|
UTSW |
11 |
54,510,842 (GRCm39) |
missense |
probably damaging |
1.00 |
R6268:Rapgef6
|
UTSW |
11 |
54,540,073 (GRCm39) |
missense |
probably damaging |
1.00 |
R6287:Rapgef6
|
UTSW |
11 |
54,517,164 (GRCm39) |
splice site |
probably null |
|
R6293:Rapgef6
|
UTSW |
11 |
54,525,607 (GRCm39) |
missense |
probably damaging |
1.00 |
R6471:Rapgef6
|
UTSW |
11 |
54,582,563 (GRCm39) |
missense |
probably damaging |
0.99 |
R6863:Rapgef6
|
UTSW |
11 |
54,437,206 (GRCm39) |
missense |
probably benign |
0.00 |
R6950:Rapgef6
|
UTSW |
11 |
54,567,206 (GRCm39) |
missense |
probably benign |
0.09 |
R7144:Rapgef6
|
UTSW |
11 |
54,548,191 (GRCm39) |
missense |
possibly damaging |
0.78 |
R7171:Rapgef6
|
UTSW |
11 |
54,567,189 (GRCm39) |
missense |
possibly damaging |
0.94 |
R7199:Rapgef6
|
UTSW |
11 |
54,437,252 (GRCm39) |
missense |
probably benign |
0.00 |
R7291:Rapgef6
|
UTSW |
11 |
54,582,065 (GRCm39) |
missense |
probably benign |
0.05 |
R7436:Rapgef6
|
UTSW |
11 |
54,501,747 (GRCm39) |
critical splice donor site |
probably null |
|
R7498:Rapgef6
|
UTSW |
11 |
54,510,830 (GRCm39) |
missense |
probably damaging |
1.00 |
R7506:Rapgef6
|
UTSW |
11 |
54,526,997 (GRCm39) |
missense |
probably benign |
0.00 |
R7527:Rapgef6
|
UTSW |
11 |
54,525,787 (GRCm39) |
missense |
unknown |
|
R7646:Rapgef6
|
UTSW |
11 |
54,516,780 (GRCm39) |
missense |
probably benign |
0.00 |
R7655:Rapgef6
|
UTSW |
11 |
54,585,279 (GRCm39) |
missense |
probably benign |
0.10 |
R7656:Rapgef6
|
UTSW |
11 |
54,585,279 (GRCm39) |
missense |
probably benign |
0.10 |
R7687:Rapgef6
|
UTSW |
11 |
54,551,901 (GRCm39) |
missense |
possibly damaging |
0.93 |
R7768:Rapgef6
|
UTSW |
11 |
54,517,414 (GRCm39) |
missense |
probably damaging |
1.00 |
R7788:Rapgef6
|
UTSW |
11 |
54,585,225 (GRCm39) |
missense |
probably damaging |
1.00 |
R7890:Rapgef6
|
UTSW |
11 |
54,517,549 (GRCm39) |
missense |
probably damaging |
1.00 |
R8113:Rapgef6
|
UTSW |
11 |
54,516,784 (GRCm39) |
missense |
probably benign |
0.03 |
R8337:Rapgef6
|
UTSW |
11 |
54,522,127 (GRCm39) |
nonsense |
probably null |
|
R8393:Rapgef6
|
UTSW |
11 |
54,578,487 (GRCm39) |
missense |
probably benign |
|
R8465:Rapgef6
|
UTSW |
11 |
54,582,308 (GRCm39) |
missense |
probably benign |
0.00 |
R8492:Rapgef6
|
UTSW |
11 |
54,581,063 (GRCm39) |
missense |
probably damaging |
0.99 |
R8791:Rapgef6
|
UTSW |
11 |
54,459,295 (GRCm39) |
missense |
probably benign |
0.15 |
R8866:Rapgef6
|
UTSW |
11 |
54,443,700 (GRCm39) |
critical splice donor site |
probably null |
|
R8917:Rapgef6
|
UTSW |
11 |
54,582,392 (GRCm39) |
nonsense |
probably null |
|
R8921:Rapgef6
|
UTSW |
11 |
54,570,065 (GRCm39) |
missense |
probably benign |
0.09 |
R9031:Rapgef6
|
UTSW |
11 |
54,578,667 (GRCm39) |
missense |
probably benign |
0.00 |
R9093:Rapgef6
|
UTSW |
11 |
54,487,912 (GRCm39) |
nonsense |
probably null |
|
R9354:Rapgef6
|
UTSW |
11 |
54,510,749 (GRCm39) |
missense |
possibly damaging |
0.66 |
R9514:Rapgef6
|
UTSW |
11 |
54,443,684 (GRCm39) |
missense |
probably benign |
0.14 |
R9516:Rapgef6
|
UTSW |
11 |
54,582,169 (GRCm39) |
missense |
probably damaging |
1.00 |
R9739:Rapgef6
|
UTSW |
11 |
54,513,189 (GRCm39) |
missense |
probably benign |
0.03 |
R9789:Rapgef6
|
UTSW |
11 |
54,540,097 (GRCm39) |
missense |
probably benign |
0.03 |
|
Predicted Primers |
PCR Primer
(F):5'- TGGGTTCTAATGCTAACCATTGAAG -3'
(R):5'- CTTGGTTGGAAAAGTGAGGACC -3'
Sequencing Primer
(F):5'- GCCTGTAAGAATAGGTACATACATG -3'
(R):5'- CTAGCCAATCGGTAAGTTCCAGG -3'
|
Posted On |
2016-03-01 |