Mutagenetix > Incidental Mutation

Incidental Mutation 'R4854:Arhgap10'

373800

Institutional Source

Beutler Lab

Gene Symbol

Arhgap10

Ensembl Gene

ENSMUSG00000037148

Gene Name

Rho GTPase activating protein 10

Synonyms

PSGAP-s, A930033B01Rik, PSGAP-m

MMRRC Submission

042465-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.165) question?

Stock #

R4854 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

77976995-78244582 bp(-) (GRCm39)

Type of Mutation

nonsense

DNA Base Change (assembly)

G to A at 78146718 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamine to Stop codon at position 229 (Q229*)

Ref Sequence

ENSEMBL: ENSMUSP00000147485 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000076316] [ENSMUST00000210519] [ENSMUST00000210922]

AlphaFold

Q6Y5D8

Predicted Effect

probably null
Transcript: ENSMUST00000076316
AA Change: Q229*

SMART Domains

Protein: ENSMUSP00000075658
Gene: ENSMUSG00000037148
AA Change: Q229*

Domain	Start	End	E-Value	Type
Pfam:BAR_3	6	249	3.3e-91	PFAM
PH	266	374	1.93e-6	SMART
RhoGAP	393	571	1.66e-63	SMART
low complexity region	633	649	N/A	INTRINSIC
SH3	731	786	1.91e-13	SMART

Predicted Effect

probably null
Transcript: ENSMUST00000210519
AA Change: Q229*

Predicted Effect

probably null
Transcript: ENSMUST00000210922
AA Change: Q229*

Meta Mutation Damage Score

0.9755

Coding Region Coverage

1x: 99.2%
3x: 98.5%
10x: 96.9%
20x: 94.2%

Validation Efficiency

98% (103/105)

MGI Phenotype

PHENOTYPE: Mice homozygous for an ENU-induced allele exhibit paraparesis, ataxic hindlimbs and splaying of hindlimbs. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 94 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1810064F22Rik	T	A	9: 22,119,333 (GRCm39)		noncoding transcript	Het
2700049A03Rik	G	T	12: 71,211,320 (GRCm39)	E685*	probably null	Het
2700049A03Rik	A	T	12: 71,211,321 (GRCm39)	E685V	possibly damaging	Het
Abl1	T	C	2: 31,669,022 (GRCm39)	Y110H	probably damaging	Het
Ablim2	C	T	5: 35,959,766 (GRCm39)	R73C	possibly damaging	Het
Agbl3	G	A	6: 34,762,219 (GRCm39)	R73Q	probably damaging	Het
Agl	C	T	3: 116,572,267 (GRCm39)		probably null	Het
Amotl1	G	A	9: 14,504,747 (GRCm39)	Q191*	probably null	Het
Apbb1ip	A	G	2: 22,743,214 (GRCm39)	K349E	possibly damaging	Het
Aspm	C	T	1: 139,405,810 (GRCm39)	Q1566*	probably null	Het
B3gnt3	G	A	8: 72,145,517 (GRCm39)	R284C	probably damaging	Het
Bltp3b	T	G	10: 89,630,346 (GRCm39)	V382G	probably damaging	Het
Brd4	A	G	17: 32,439,211 (GRCm39)	V423A	probably damaging	Het
Btbd9	A	T	17: 30,743,839 (GRCm39)	I221N	probably damaging	Het
Camp	A	G	9: 109,676,519 (GRCm39)	V168A	probably benign	Het
Cd1d2	T	A	3: 86,896,556 (GRCm39)		probably null	Het
Cdkn2d	A	T	9: 21,202,223 (GRCm39)	V8D	probably benign	Het
Cimap1a	A	G	7: 140,429,375 (GRCm39)	Y168C	probably damaging	Het
Clec4g	T	C	8: 3,766,534 (GRCm39)	N256D	probably damaging	Het
Clspn	A	G	4: 126,469,743 (GRCm39)	I771V	probably benign	Het
Cntn6	A	G	6: 104,836,436 (GRCm39)	E862G	possibly damaging	Het
Col6a5	T	C	9: 105,775,950 (GRCm39)	T1702A	probably benign	Het
Dnah7a	T	C	1: 53,745,888 (GRCm39)		probably benign	Het
Dubr	T	C	16: 50,552,886 (GRCm39)		noncoding transcript	Het
Dusp26	G	A	8: 31,584,165 (GRCm39)	V91M	probably damaging	Het
Edc4	A	T	8: 106,614,557 (GRCm39)		probably benign	Het
F5	C	T	1: 164,019,715 (GRCm39)	A730V	probably damaging	Het
Foxf1	A	G	8: 121,813,553 (GRCm39)	T358A	probably benign	Het
Frem1	A	T	4: 82,834,995 (GRCm39)	N1810K	possibly damaging	Het
Galc	A	T	12: 98,223,136 (GRCm39)	F87I	probably damaging	Het
Gars1	A	G	6: 55,023,403 (GRCm39)	D66G	probably damaging	Het
Gbp11	G	A	5: 105,473,374 (GRCm39)	L460F	probably damaging	Het
Gdf7	T	C	12: 8,348,014 (GRCm39)	I436V	probably damaging	Het
Gigyf2	C	T	1: 87,282,135 (GRCm39)		probably benign	Het
Gm12239	T	C	11: 55,906,779 (GRCm39)		noncoding transcript	Het
Gm5592	A	C	7: 40,866,895 (GRCm39)		probably benign	Het
Gp2	A	T	7: 119,051,422 (GRCm39)	D264E	possibly damaging	Het
Gphn	G	A	12: 78,673,984 (GRCm39)	V526M	probably damaging	Het
Grid1	A	G	14: 35,043,598 (GRCm39)	I318V	probably benign	Het
Grm2	C	A	9: 106,531,331 (GRCm39)	V53F	possibly damaging	Het
Gtpbp1	T	C	15: 79,603,406 (GRCm39)	S632P	probably benign	Het
H2-M1	A	G	17: 36,980,950 (GRCm39)	F329L	probably benign	Het
Hecw1	T	A	13: 14,491,477 (GRCm39)	D92V	probably benign	Het
Hgh1	T	C	15: 76,253,382 (GRCm39)	L76P	probably damaging	Het
Idi2	C	A	13: 9,007,879 (GRCm39)	N63K	probably benign	Het
Ift122	A	G	6: 115,839,707 (GRCm39)	T25A	possibly damaging	Het
Itgb2l	A	T	16: 96,227,317 (GRCm39)	C575*	probably null	Het
Jup	A	G	11: 100,273,867 (GRCm39)	S225P	possibly damaging	Het
Kcng3	A	T	17: 83,895,735 (GRCm39)	C244S	probably damaging	Het
Klhl2	T	A	8: 65,287,111 (GRCm39)	M46L	possibly damaging	Het
Ksr1	A	T	11: 78,918,528 (GRCm39)	I460N	probably damaging	Het
Lama3	T	A	18: 12,544,599 (GRCm39)	F314Y	probably benign	Het
Lbp	T	C	2: 158,169,438 (GRCm39)	V421A	possibly damaging	Het
Lcp1	G	A	14: 75,437,929 (GRCm39)	G113D	probably damaging	Het
Lrp1b	A	T	2: 41,001,089 (GRCm39)	L2045H	probably damaging	Het
Mbd2	G	T	18: 70,701,806 (GRCm39)	D107Y	unknown	Het
Ms4a14	C	T	19: 11,287,733 (GRCm39)	V96I	possibly damaging	Het
N4bp2l2	C	T	5: 150,585,516 (GRCm39)	E155K	probably benign	Het
Nbeal2	T	G	9: 110,460,464 (GRCm39)	H1790P	probably damaging	Het
Nsg2	G	A	11: 31,981,806 (GRCm39)	G84R	probably benign	Het
Or10ad1b	A	C	15: 98,125,425 (GRCm39)	F34V	possibly damaging	Het
Or12e10	A	G	2: 87,640,934 (GRCm39)	T257A	probably damaging	Het
P2rx2	T	C	5: 110,488,793 (GRCm39)	N224D	probably damaging	Het
P2rx5	A	T	11: 73,062,605 (GRCm39)	E438V	probably benign	Het
Paip1	C	A	13: 119,586,425 (GRCm39)		probably benign	Het
Pik3c2g	T	A	6: 139,714,505 (GRCm39)	V219E	probably damaging	Het
Ppp1r12b	T	C	1: 134,801,689 (GRCm39)	E509G	probably damaging	Het
Ppp1r15a	T	C	7: 45,174,797 (GRCm39)	S4G	probably benign	Het
Ppp5c	T	C	7: 16,742,947 (GRCm39)	S224G	probably benign	Het
Prr30	T	G	14: 101,435,879 (GRCm39)	I228L	probably benign	Het
Purg	A	G	8: 33,877,342 (GRCm39)	I327V	possibly damaging	Het
Ralb	T	C	1: 119,403,645 (GRCm39)	T161A	probably benign	Het
Ripor3	T	C	2: 167,834,733 (GRCm39)	R253G	probably benign	Het
Scgb2b6	T	C	7: 31,317,257 (GRCm39)		noncoding transcript	Het
Setd5	G	T	6: 113,128,360 (GRCm39)	G1438W	probably damaging	Het
Sh3rf3	T	A	10: 58,649,545 (GRCm39)	L50Q	possibly damaging	Het
Sipa1l2	G	T	8: 126,200,340 (GRCm39)	T662K	probably damaging	Het
Skint5	A	G	4: 113,437,725 (GRCm39)	L1021S	unknown	Het
Slc22a23	T	C	13: 34,387,924 (GRCm39)	S391G	probably benign	Het
Slc4a5	G	A	6: 83,247,999 (GRCm39)	V402I	probably benign	Het
Slco4c1	G	A	1: 96,768,953 (GRCm39)	P303L	probably damaging	Het
Spink5	A	T	18: 44,153,908 (GRCm39)	*1018C	probably null	Het
Stag3	T	A	5: 138,294,956 (GRCm39)		probably null	Het
Tmem117	T	C	15: 94,992,569 (GRCm39)	F410L	probably damaging	Het
Tmod1	A	G	4: 46,090,920 (GRCm39)	K158E	possibly damaging	Het
Tpsb2	GGCTGCTGCTGCTGCTG	GGCTGCTGCTGCTG	17: 25,585,536 (GRCm39)		probably benign	Het
Traf4	G	A	11: 78,052,346 (GRCm39)	Q100*	probably null	Het
Trpc4	A	G	3: 54,209,639 (GRCm39)	Y668C	probably damaging	Het
Ttn	T	A	2: 76,597,927 (GRCm39)	N11335I	possibly damaging	Het
Usp39	A	T	6: 72,302,665 (GRCm39)	V463E	probably benign	Het
Vmn1r6	A	C	6: 56,979,683 (GRCm39)	Y115S	probably benign	Het
Vmn2r44	A	G	7: 8,383,300 (GRCm39)	I98T	possibly damaging	Het
Zfp462	A	G	4: 55,010,668 (GRCm39)	Y878C	probably damaging	Het
Zfp474	T	C	18: 52,771,503 (GRCm39)	I52T	possibly damaging	Het

Other mutations in Arhgap10

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01529:Arhgap10	APN	8	78,072,920 (GRCm39)	missense	possibly damaging	0.80
IGL01689:Arhgap10	APN	8	78,137,763 (GRCm39)	splice site	probably benign
IGL01802:Arhgap10	APN	8	78,146,714 (GRCm39)	missense	probably damaging	0.99
IGL01832:Arhgap10	APN	8	77,985,758 (GRCm39)	missense	probably benign	0.00
IGL02291:Arhgap10	APN	8	78,109,344 (GRCm39)	splice site	probably benign
IGL02834:Arhgap10	APN	8	78,091,729 (GRCm39)	missense	probably damaging	1.00
IGL02928:Arhgap10	APN	8	77,977,539 (GRCm39)	unclassified	probably benign
IGL03149:Arhgap10	APN	8	78,136,167 (GRCm39)	splice site	probably benign
IGL03215:Arhgap10	APN	8	78,003,781 (GRCm39)	missense	probably benign
IGL03331:Arhgap10	APN	8	78,146,711 (GRCm39)	missense	probably damaging	0.99
R0276:Arhgap10	UTSW	8	78,140,210 (GRCm39)	missense	probably benign	0.11
R0376:Arhgap10	UTSW	8	78,177,453 (GRCm39)	splice site	probably benign
R0454:Arhgap10	UTSW	8	77,977,594 (GRCm39)	missense	probably damaging	0.97
R0714:Arhgap10	UTSW	8	78,078,316 (GRCm39)	splice site	probably benign
R1033:Arhgap10	UTSW	8	77,983,976 (GRCm39)	missense	possibly damaging	0.80
R1036:Arhgap10	UTSW	8	78,037,398 (GRCm39)	missense	probably damaging	0.98
R1083:Arhgap10	UTSW	8	78,244,378 (GRCm39)	missense	probably damaging	1.00
R1596:Arhgap10	UTSW	8	78,177,326 (GRCm39)	missense	possibly damaging	0.93
R1710:Arhgap10	UTSW	8	78,085,216 (GRCm39)	nonsense	probably null
R1918:Arhgap10	UTSW	8	77,985,708 (GRCm39)	missense	probably benign
R1937:Arhgap10	UTSW	8	78,071,282 (GRCm39)	missense	probably damaging	1.00
R1959:Arhgap10	UTSW	8	78,136,255 (GRCm39)	missense	possibly damaging	0.78
R2348:Arhgap10	UTSW	8	78,177,555 (GRCm39)	splice site	probably benign
R3703:Arhgap10	UTSW	8	77,985,685 (GRCm39)	critical splice donor site	probably null
R3979:Arhgap10	UTSW	8	78,147,354 (GRCm39)	missense	probably benign	0.01
R4855:Arhgap10	UTSW	8	78,159,367 (GRCm39)	critical splice donor site	probably null
R4928:Arhgap10	UTSW	8	78,152,957 (GRCm39)	critical splice donor site	probably null
R5033:Arhgap10	UTSW	8	78,109,386 (GRCm39)	missense	probably damaging	0.99
R5532:Arhgap10	UTSW	8	78,146,701 (GRCm39)	missense	probably benign	0.19
R5644:Arhgap10	UTSW	8	78,137,684 (GRCm39)	missense	probably benign	0.00
R5781:Arhgap10	UTSW	8	78,177,336 (GRCm39)	missense	possibly damaging	0.56
R5824:Arhgap10	UTSW	8	78,085,181 (GRCm39)	nonsense	probably null
R5861:Arhgap10	UTSW	8	78,037,393 (GRCm39)	missense	probably damaging	1.00
R5872:Arhgap10	UTSW	8	78,071,267 (GRCm39)	critical splice donor site	probably null
R6360:Arhgap10	UTSW	8	77,985,831 (GRCm39)	nonsense	probably null
R6423:Arhgap10	UTSW	8	78,244,386 (GRCm39)	missense	probably damaging	1.00
R6694:Arhgap10	UTSW	8	78,137,692 (GRCm39)	missense	probably benign	0.00
R6900:Arhgap10	UTSW	8	78,037,491 (GRCm39)	missense	probably damaging	1.00
R6936:Arhgap10	UTSW	8	78,037,376 (GRCm39)	nonsense	probably null
R7001:Arhgap10	UTSW	8	78,091,717 (GRCm39)	missense	possibly damaging	0.51
R7150:Arhgap10	UTSW	8	77,977,583 (GRCm39)	missense	probably damaging	1.00
R7461:Arhgap10	UTSW	8	78,115,326 (GRCm39)	missense	probably damaging	0.99
R7525:Arhgap10	UTSW	8	78,146,699 (GRCm39)	critical splice donor site	probably null
R8051:Arhgap10	UTSW	8	78,244,309 (GRCm39)	missense	probably damaging	0.97
R8081:Arhgap10	UTSW	8	78,109,375 (GRCm39)	missense	possibly damaging	0.68
R8175:Arhgap10	UTSW	8	78,037,471 (GRCm39)	missense	probably benign	0.03
R8262:Arhgap10	UTSW	8	78,037,468 (GRCm39)	missense	probably benign
R8702:Arhgap10	UTSW	8	77,985,732 (GRCm39)	missense	probably benign
R8778:Arhgap10	UTSW	8	78,140,240 (GRCm39)	missense	probably damaging	1.00
R9015:Arhgap10	UTSW	8	77,985,687 (GRCm39)	missense	probably benign
R9113:Arhgap10	UTSW	8	77,985,701 (GRCm39)	missense	probably damaging	1.00
R9275:Arhgap10	UTSW	8	78,137,665 (GRCm39)	missense	probably damaging	1.00
R9457:Arhgap10	UTSW	8	78,111,415 (GRCm39)	missense	probably benign	0.43
R9623:Arhgap10	UTSW	8	77,985,786 (GRCm39)	missense	probably benign
Z1176:Arhgap10	UTSW	8	78,159,434 (GRCm39)	missense	probably damaging	0.97
Z1176:Arhgap10	UTSW	8	78,003,804 (GRCm39)	missense	probably benign	0.01

Predicted Primers

PCR Primer
(F):5'- TGGAGCCTCATCAGCTTCAGAG -3'
(R):5'- TTTCAGGACGTGACAGACAGG -3'

Sequencing Primer
(F):5'- GAGCCATGTGTTACACCAAAGTTGAC -3'
(R):5'- TCCGGATGGCAGTGCTCTG -3'

Posted On

2016-03-01