Incidental Mutation 'R4836:Kdm5b'
ID |
374517 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Kdm5b
|
Ensembl Gene |
ENSMUSG00000042207 |
Gene Name |
lysine demethylase 5B |
Synonyms |
2010009J12Rik, PLU-1, Rb-Bp2, Jarid1b, D1Ertd202e, Plu1, 2210016I17Rik |
MMRRC Submission |
042451-MU
|
Accession Numbers |
|
Essential gene? |
Possibly non essential
(E-score: 0.451)
|
Stock # |
R4836 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
1 |
Chromosomal Location |
134487916-134560621 bp(+) (GRCm39) |
Type of Mutation |
splice site |
DNA Base Change (assembly) |
C to A
at 134521053 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
|
Ref Sequence |
ENSEMBL: ENSMUSP00000107817
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000047714]
[ENSMUST00000112198]
|
AlphaFold |
Q80Y84 |
PDB Structure |
Solution structure of the ARID domain of Jarid1b protein [SOLUTION NMR]
|
Predicted Effect |
probably null
Transcript: ENSMUST00000047714
|
SMART Domains |
Protein: ENSMUSP00000038138 Gene: ENSMUSG00000042207
Domain | Start | End | E-Value | Type |
low complexity region
|
7 |
30 |
N/A |
INTRINSIC |
JmjN
|
31 |
72 |
2.87e-20 |
SMART |
ARID
|
94 |
183 |
7.39e-32 |
SMART |
BRIGHT
|
98 |
188 |
1.51e-35 |
SMART |
low complexity region
|
228 |
239 |
N/A |
INTRINSIC |
PHD
|
311 |
357 |
6.15e-14 |
SMART |
JmjC
|
453 |
619 |
2.33e-67 |
SMART |
Pfam:zf-C5HC2
|
692 |
744 |
2.2e-17 |
PFAM |
Pfam:PLU-1
|
757 |
1088 |
5.6e-92 |
PFAM |
low complexity region
|
1097 |
1109 |
N/A |
INTRINSIC |
PHD
|
1178 |
1222 |
6.2e-10 |
SMART |
low complexity region
|
1225 |
1236 |
N/A |
INTRINSIC |
low complexity region
|
1406 |
1417 |
N/A |
INTRINSIC |
low complexity region
|
1470 |
1484 |
N/A |
INTRINSIC |
PHD
|
1486 |
1536 |
1.18e-6 |
SMART |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000112197
|
SMART Domains |
Protein: ENSMUSP00000107816 Gene: ENSMUSG00000042207
Domain | Start | End | E-Value | Type |
low complexity region
|
7 |
30 |
N/A |
INTRINSIC |
JmjN
|
31 |
72 |
2.87e-20 |
SMART |
ARID
|
94 |
183 |
7.39e-32 |
SMART |
BRIGHT
|
98 |
188 |
1.51e-35 |
SMART |
low complexity region
|
225 |
236 |
N/A |
INTRINSIC |
PHD
|
308 |
354 |
6.15e-14 |
SMART |
JmjC
|
450 |
595 |
2.6e-24 |
SMART |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000112198
|
SMART Domains |
Protein: ENSMUSP00000107817 Gene: ENSMUSG00000042207
Domain | Start | End | E-Value | Type |
low complexity region
|
7 |
30 |
N/A |
INTRINSIC |
JmjN
|
31 |
72 |
2.87e-20 |
SMART |
ARID
|
94 |
183 |
7.39e-32 |
SMART |
BRIGHT
|
98 |
188 |
1.51e-35 |
SMART |
low complexity region
|
228 |
239 |
N/A |
INTRINSIC |
PHD
|
311 |
357 |
6.15e-14 |
SMART |
JmjC
|
453 |
619 |
2.33e-67 |
SMART |
Pfam:zf-C5HC2
|
692 |
745 |
6.7e-21 |
PFAM |
Pfam:PLU-1
|
756 |
1088 |
6e-94 |
PFAM |
low complexity region
|
1097 |
1109 |
N/A |
INTRINSIC |
PHD
|
1178 |
1222 |
6.2e-10 |
SMART |
low complexity region
|
1225 |
1236 |
N/A |
INTRINSIC |
low complexity region
|
1406 |
1417 |
N/A |
INTRINSIC |
low complexity region
|
1470 |
1484 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000186128
|
Meta Mutation Damage Score |
0.9755 |
Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.4%
- 10x: 96.6%
- 20x: 93.2%
|
Validation Efficiency |
98% (87/89) |
MGI Phenotype |
FUNCTION: This gene encodes a lysine-specific histone demethylase that belongs to the jumonji/ARID domain-containing family of histone demethylases. The encoded protein is capable of demethylating tri-, di- and monomethylated lysine 4 of histone H3. This protein plays a role in the transcriptional repression or certain tumor suppressor genes and is upregulated in certain cancer cells. This protein may also play a role in genome stability and DNA repair. Homozygous mutant mice display decreased body weight, decreased female fertility, lower uterine weight, and a delay in mammary development. Knockout of this gene has also been associated with embryonic lethality. [provided by RefSeq, Dec 2016] PHENOTYPE: Mice homozygous for a gene trapped allele exhibit decreased body weight, background-sensitive premature mortality, decreased female fertility, delayed mammary gland development, decreased serum estradiol levels, and reduced mammary epithelial cell proliferation in early puberty. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 78 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Acox1 |
A |
T |
11: 116,066,152 (GRCm39) |
S453T |
probably benign |
Het |
Ahnak2 |
A |
T |
12: 112,740,550 (GRCm39) |
V368D |
probably damaging |
Het |
Ankrd53 |
A |
T |
6: 83,745,134 (GRCm39) |
Y448F |
probably damaging |
Het |
Arhgef15 |
A |
T |
11: 68,840,751 (GRCm39) |
|
probably benign |
Het |
Atg2b |
T |
C |
12: 105,613,073 (GRCm39) |
N1166S |
probably benign |
Het |
Atl3 |
C |
T |
19: 7,486,910 (GRCm39) |
R77* |
probably null |
Het |
Bend6 |
T |
C |
1: 33,922,654 (GRCm39) |
|
probably benign |
Het |
Ccnt1 |
C |
A |
15: 98,465,444 (GRCm39) |
R25L |
probably damaging |
Het |
Cct4 |
A |
G |
11: 22,952,898 (GRCm39) |
T525A |
probably benign |
Het |
Cep350 |
T |
C |
1: 155,804,579 (GRCm39) |
I835V |
probably damaging |
Het |
Cimap2 |
T |
A |
4: 106,467,724 (GRCm39) |
|
probably null |
Het |
Clcn1 |
G |
T |
6: 42,286,898 (GRCm39) |
V652L |
probably damaging |
Het |
Cntln |
T |
A |
4: 84,967,957 (GRCm39) |
Y725* |
probably null |
Het |
Cog5 |
T |
C |
12: 31,969,732 (GRCm39) |
F21L |
probably benign |
Het |
D6Ertd527e |
GGCAGCAGCAGCA |
GGCAGCAGCAGCAGCA |
6: 87,088,406 (GRCm39) |
|
probably benign |
Het |
Dnm2 |
A |
T |
9: 21,402,626 (GRCm39) |
|
probably benign |
Het |
Dnmt1 |
C |
T |
9: 20,819,854 (GRCm39) |
V1430I |
probably damaging |
Het |
Dpep1 |
A |
G |
8: 123,927,106 (GRCm39) |
D285G |
probably damaging |
Het |
Eef2kmt |
C |
T |
16: 5,066,867 (GRCm39) |
V129M |
probably damaging |
Het |
Epha3 |
A |
T |
16: 63,403,920 (GRCm39) |
M726K |
probably damaging |
Het |
Fat3 |
A |
G |
9: 16,289,019 (GRCm39) |
L168P |
probably damaging |
Het |
Frem3 |
T |
A |
8: 81,390,026 (GRCm39) |
F1759Y |
probably damaging |
Het |
Fubp3 |
T |
A |
2: 31,498,153 (GRCm39) |
S56R |
possibly damaging |
Het |
Gm1965 |
T |
C |
6: 89,122,392 (GRCm39) |
|
noncoding transcript |
Het |
Gm5592 |
C |
T |
7: 40,864,958 (GRCm39) |
|
probably benign |
Het |
H1f9 |
T |
A |
11: 94,858,843 (GRCm39) |
L46* |
probably null |
Het |
Irs1 |
TGGGGTGGACATCGAACTGAAGGAG |
TG |
1: 82,265,453 (GRCm39) |
913 |
probably null |
Het |
Isl1 |
A |
G |
13: 116,439,619 (GRCm39) |
M243T |
probably benign |
Het |
Itpr1 |
A |
T |
6: 108,366,498 (GRCm39) |
I142F |
probably damaging |
Het |
Jak1 |
T |
C |
4: 101,012,263 (GRCm39) |
T1069A |
probably damaging |
Het |
Jmjd1c |
T |
C |
10: 67,069,225 (GRCm39) |
V1848A |
probably benign |
Het |
Kdm5a |
T |
C |
6: 120,389,363 (GRCm39) |
V930A |
probably damaging |
Het |
Lilra5 |
T |
C |
7: 4,241,713 (GRCm39) |
F171L |
possibly damaging |
Het |
Map1b |
A |
G |
13: 99,567,562 (GRCm39) |
S1720P |
unknown |
Het |
Mcpt1 |
A |
T |
14: 56,257,017 (GRCm39) |
Q185L |
probably damaging |
Het |
Mmp20 |
T |
A |
9: 7,644,027 (GRCm39) |
D238E |
possibly damaging |
Het |
Mov10l1 |
A |
T |
15: 88,904,472 (GRCm39) |
I784F |
possibly damaging |
Het |
Mroh2b |
C |
T |
15: 4,933,752 (GRCm39) |
P101S |
probably damaging |
Het |
Myh3 |
G |
T |
11: 66,987,765 (GRCm39) |
A1413S |
probably benign |
Het |
Naa80 |
A |
T |
9: 107,460,738 (GRCm39) |
Y211F |
probably damaging |
Het |
Npdc1 |
G |
A |
2: 25,298,957 (GRCm39) |
D284N |
probably damaging |
Het |
Or12j4 |
A |
G |
7: 140,046,989 (GRCm39) |
R292G |
probably damaging |
Het |
Or2t48 |
A |
C |
11: 58,420,308 (GRCm39) |
M168R |
probably damaging |
Het |
Or4a66 |
A |
G |
2: 88,531,544 (GRCm39) |
I43T |
probably damaging |
Het |
Or5g9 |
A |
G |
2: 85,551,793 (GRCm39) |
I15V |
probably benign |
Het |
Or8k22 |
A |
T |
2: 86,163,571 (GRCm39) |
M43K |
probably benign |
Het |
Or8k23 |
G |
A |
2: 86,186,094 (GRCm39) |
L211F |
probably benign |
Het |
Palld |
T |
A |
8: 62,140,415 (GRCm39) |
T531S |
probably benign |
Het |
Parp4 |
A |
G |
14: 56,823,195 (GRCm39) |
E105G |
probably benign |
Het |
Phf11a |
A |
T |
14: 59,525,028 (GRCm39) |
S59T |
probably damaging |
Het |
Ppp1r12b |
G |
T |
1: 134,883,471 (GRCm39) |
A17E |
probably benign |
Het |
Rad50 |
A |
T |
11: 53,541,480 (GRCm39) |
I1252N |
probably damaging |
Het |
Ramp3 |
A |
G |
11: 6,624,761 (GRCm39) |
|
probably null |
Het |
Rrbp1 |
G |
A |
2: 143,830,337 (GRCm39) |
T610I |
possibly damaging |
Het |
Scart2 |
T |
C |
7: 139,879,021 (GRCm39) |
I1051T |
probably benign |
Het |
Semp2l2a |
C |
T |
8: 13,888,007 (GRCm39) |
S28N |
probably benign |
Het |
Slc4a10 |
A |
G |
2: 62,098,531 (GRCm39) |
Y555C |
probably damaging |
Het |
Slc5a2 |
A |
G |
7: 127,866,677 (GRCm39) |
|
probably null |
Het |
Smoc1 |
T |
A |
12: 81,226,322 (GRCm39) |
D371E |
probably damaging |
Het |
Stmn1 |
T |
A |
4: 134,197,495 (GRCm39) |
|
probably benign |
Het |
Sulf1 |
C |
T |
1: 12,912,910 (GRCm39) |
L715F |
probably benign |
Het |
Surf1 |
T |
C |
2: 26,804,255 (GRCm39) |
T180A |
possibly damaging |
Het |
Syne2 |
A |
G |
12: 76,026,593 (GRCm39) |
I3474V |
probably damaging |
Het |
Tchh |
A |
T |
3: 93,352,455 (GRCm39) |
R632W |
unknown |
Het |
Tchh |
A |
T |
3: 93,354,895 (GRCm39) |
D1445V |
unknown |
Het |
Tctn1 |
A |
T |
5: 122,383,568 (GRCm39) |
M505K |
probably benign |
Het |
Tdrkh |
T |
A |
3: 94,332,897 (GRCm39) |
I150N |
probably damaging |
Het |
Tespa1 |
C |
T |
10: 130,198,028 (GRCm39) |
T350I |
probably benign |
Het |
Thbs1 |
A |
G |
2: 117,945,499 (GRCm39) |
Y326C |
possibly damaging |
Het |
Tmem208 |
C |
T |
8: 106,055,296 (GRCm39) |
S119F |
probably damaging |
Het |
Tmprss6 |
G |
C |
15: 78,329,588 (GRCm39) |
A91G |
probably damaging |
Het |
Trp53bp2 |
C |
T |
1: 182,259,147 (GRCm39) |
R67W |
probably damaging |
Het |
Ttn |
A |
G |
2: 76,541,541 (GRCm39) |
I25488T |
possibly damaging |
Het |
Txnl4a |
A |
G |
18: 80,265,468 (GRCm39) |
E111G |
probably damaging |
Het |
Unc13b |
T |
G |
4: 43,237,137 (GRCm39) |
I3402M |
probably damaging |
Het |
Vmn1r188 |
A |
C |
13: 22,272,291 (GRCm39) |
I82L |
probably benign |
Het |
Zfp65 |
A |
G |
13: 67,856,994 (GRCm39) |
V95A |
probably benign |
Het |
Zfp985 |
T |
A |
4: 147,668,612 (GRCm39) |
S493R |
probably damaging |
Het |
|
Other mutations in Kdm5b |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00230:Kdm5b
|
APN |
1 |
134,548,693 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01458:Kdm5b
|
APN |
1 |
134,549,724 (GRCm39) |
missense |
possibly damaging |
0.53 |
IGL01567:Kdm5b
|
APN |
1 |
134,530,278 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01625:Kdm5b
|
APN |
1 |
134,545,706 (GRCm39) |
missense |
possibly damaging |
0.74 |
IGL01970:Kdm5b
|
APN |
1 |
134,528,465 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02183:Kdm5b
|
APN |
1 |
134,552,669 (GRCm39) |
missense |
probably benign |
0.09 |
IGL02592:Kdm5b
|
APN |
1 |
134,552,591 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02695:Kdm5b
|
APN |
1 |
134,532,223 (GRCm39) |
missense |
possibly damaging |
0.94 |
IGL02697:Kdm5b
|
APN |
1 |
134,516,511 (GRCm39) |
splice site |
probably benign |
|
IGL03036:Kdm5b
|
APN |
1 |
134,536,675 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03056:Kdm5b
|
APN |
1 |
134,515,717 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL03206:Kdm5b
|
APN |
1 |
134,555,055 (GRCm39) |
missense |
probably benign |
|
IGL03342:Kdm5b
|
APN |
1 |
134,530,314 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03388:Kdm5b
|
APN |
1 |
134,555,060 (GRCm39) |
missense |
probably benign |
|
amaryllis
|
UTSW |
1 |
134,536,799 (GRCm39) |
critical splice donor site |
probably null |
|
PIT4486001:Kdm5b
|
UTSW |
1 |
134,556,423 (GRCm39) |
missense |
probably damaging |
1.00 |
R0233:Kdm5b
|
UTSW |
1 |
134,532,372 (GRCm39) |
splice site |
probably benign |
|
R0334:Kdm5b
|
UTSW |
1 |
134,532,260 (GRCm39) |
missense |
probably damaging |
0.99 |
R0504:Kdm5b
|
UTSW |
1 |
134,548,761 (GRCm39) |
critical splice donor site |
probably null |
|
R0505:Kdm5b
|
UTSW |
1 |
134,530,309 (GRCm39) |
missense |
probably damaging |
0.96 |
R0521:Kdm5b
|
UTSW |
1 |
134,545,771 (GRCm39) |
missense |
possibly damaging |
0.65 |
R1004:Kdm5b
|
UTSW |
1 |
134,516,642 (GRCm39) |
missense |
possibly damaging |
0.71 |
R1087:Kdm5b
|
UTSW |
1 |
134,528,375 (GRCm39) |
missense |
probably damaging |
1.00 |
R1126:Kdm5b
|
UTSW |
1 |
134,541,729 (GRCm39) |
missense |
possibly damaging |
0.90 |
R1221:Kdm5b
|
UTSW |
1 |
134,526,829 (GRCm39) |
missense |
probably damaging |
0.98 |
R1230:Kdm5b
|
UTSW |
1 |
134,540,992 (GRCm39) |
missense |
probably damaging |
1.00 |
R1345:Kdm5b
|
UTSW |
1 |
134,558,288 (GRCm39) |
missense |
possibly damaging |
0.94 |
R1482:Kdm5b
|
UTSW |
1 |
134,552,635 (GRCm39) |
missense |
probably damaging |
1.00 |
R1582:Kdm5b
|
UTSW |
1 |
134,552,591 (GRCm39) |
missense |
probably damaging |
0.99 |
R1653:Kdm5b
|
UTSW |
1 |
134,530,219 (GRCm39) |
missense |
probably damaging |
1.00 |
R1693:Kdm5b
|
UTSW |
1 |
134,525,314 (GRCm39) |
splice site |
probably benign |
|
R1721:Kdm5b
|
UTSW |
1 |
134,540,919 (GRCm39) |
splice site |
probably benign |
|
R1741:Kdm5b
|
UTSW |
1 |
134,545,755 (GRCm39) |
missense |
possibly damaging |
0.82 |
R1762:Kdm5b
|
UTSW |
1 |
134,532,205 (GRCm39) |
nonsense |
probably null |
|
R1820:Kdm5b
|
UTSW |
1 |
134,525,408 (GRCm39) |
missense |
possibly damaging |
0.87 |
R1872:Kdm5b
|
UTSW |
1 |
134,552,732 (GRCm39) |
missense |
probably damaging |
1.00 |
R1966:Kdm5b
|
UTSW |
1 |
134,541,611 (GRCm39) |
splice site |
probably null |
|
R2056:Kdm5b
|
UTSW |
1 |
134,540,952 (GRCm39) |
missense |
probably benign |
0.05 |
R2059:Kdm5b
|
UTSW |
1 |
134,540,952 (GRCm39) |
missense |
probably benign |
0.05 |
R2405:Kdm5b
|
UTSW |
1 |
134,536,754 (GRCm39) |
missense |
probably damaging |
0.97 |
R3417:Kdm5b
|
UTSW |
1 |
134,515,715 (GRCm39) |
missense |
probably damaging |
1.00 |
R3771:Kdm5b
|
UTSW |
1 |
134,541,083 (GRCm39) |
missense |
probably damaging |
1.00 |
R3783:Kdm5b
|
UTSW |
1 |
134,558,280 (GRCm39) |
missense |
probably benign |
|
R3803:Kdm5b
|
UTSW |
1 |
134,543,679 (GRCm39) |
missense |
probably benign |
0.07 |
R3980:Kdm5b
|
UTSW |
1 |
134,547,408 (GRCm39) |
missense |
probably benign |
0.11 |
R3983:Kdm5b
|
UTSW |
1 |
134,559,042 (GRCm39) |
missense |
possibly damaging |
0.91 |
R4013:Kdm5b
|
UTSW |
1 |
134,555,067 (GRCm39) |
missense |
possibly damaging |
0.86 |
R4162:Kdm5b
|
UTSW |
1 |
134,552,899 (GRCm39) |
missense |
probably benign |
0.01 |
R4701:Kdm5b
|
UTSW |
1 |
134,533,750 (GRCm39) |
intron |
probably benign |
|
R4791:Kdm5b
|
UTSW |
1 |
134,558,538 (GRCm39) |
missense |
possibly damaging |
0.82 |
R4924:Kdm5b
|
UTSW |
1 |
134,559,089 (GRCm39) |
missense |
probably benign |
0.00 |
R5135:Kdm5b
|
UTSW |
1 |
134,516,484 (GRCm39) |
intron |
probably benign |
|
R5248:Kdm5b
|
UTSW |
1 |
134,548,735 (GRCm39) |
missense |
probably benign |
0.11 |
R5290:Kdm5b
|
UTSW |
1 |
134,549,837 (GRCm39) |
splice site |
probably null |
|
R5358:Kdm5b
|
UTSW |
1 |
134,535,432 (GRCm39) |
nonsense |
probably null |
|
R5388:Kdm5b
|
UTSW |
1 |
134,536,635 (GRCm39) |
nonsense |
probably null |
|
R5396:Kdm5b
|
UTSW |
1 |
134,549,836 (GRCm39) |
splice site |
probably null |
|
R5397:Kdm5b
|
UTSW |
1 |
134,549,836 (GRCm39) |
splice site |
probably null |
|
R5398:Kdm5b
|
UTSW |
1 |
134,549,836 (GRCm39) |
splice site |
probably null |
|
R5399:Kdm5b
|
UTSW |
1 |
134,549,836 (GRCm39) |
splice site |
probably null |
|
R5529:Kdm5b
|
UTSW |
1 |
134,515,741 (GRCm39) |
missense |
probably damaging |
1.00 |
R5540:Kdm5b
|
UTSW |
1 |
134,558,979 (GRCm39) |
missense |
probably damaging |
0.98 |
R5661:Kdm5b
|
UTSW |
1 |
134,526,811 (GRCm39) |
missense |
probably benign |
0.01 |
R5663:Kdm5b
|
UTSW |
1 |
134,558,373 (GRCm39) |
missense |
probably benign |
|
R5822:Kdm5b
|
UTSW |
1 |
134,516,511 (GRCm39) |
splice site |
probably benign |
|
R6226:Kdm5b
|
UTSW |
1 |
134,536,616 (GRCm39) |
missense |
probably damaging |
0.99 |
R6368:Kdm5b
|
UTSW |
1 |
134,526,945 (GRCm39) |
missense |
probably damaging |
1.00 |
R6681:Kdm5b
|
UTSW |
1 |
134,541,007 (GRCm39) |
missense |
possibly damaging |
0.90 |
R6715:Kdm5b
|
UTSW |
1 |
134,536,799 (GRCm39) |
critical splice donor site |
probably null |
|
R7132:Kdm5b
|
UTSW |
1 |
134,526,844 (GRCm39) |
missense |
probably damaging |
1.00 |
R7202:Kdm5b
|
UTSW |
1 |
134,552,497 (GRCm39) |
missense |
probably benign |
|
R7258:Kdm5b
|
UTSW |
1 |
134,548,759 (GRCm39) |
missense |
probably damaging |
1.00 |
R7335:Kdm5b
|
UTSW |
1 |
134,488,177 (GRCm39) |
missense |
probably damaging |
1.00 |
R7420:Kdm5b
|
UTSW |
1 |
134,532,235 (GRCm39) |
missense |
probably benign |
0.14 |
R7426:Kdm5b
|
UTSW |
1 |
134,523,571 (GRCm39) |
missense |
probably benign |
0.02 |
R7452:Kdm5b
|
UTSW |
1 |
134,552,686 (GRCm39) |
missense |
probably damaging |
1.00 |
R7595:Kdm5b
|
UTSW |
1 |
134,536,704 (GRCm39) |
missense |
probably benign |
0.00 |
R7612:Kdm5b
|
UTSW |
1 |
134,552,656 (GRCm39) |
nonsense |
probably null |
|
R7704:Kdm5b
|
UTSW |
1 |
134,515,669 (GRCm39) |
missense |
probably damaging |
1.00 |
R7846:Kdm5b
|
UTSW |
1 |
134,545,578 (GRCm39) |
missense |
probably damaging |
1.00 |
R8115:Kdm5b
|
UTSW |
1 |
134,547,411 (GRCm39) |
missense |
possibly damaging |
0.83 |
R8146:Kdm5b
|
UTSW |
1 |
134,552,864 (GRCm39) |
missense |
probably benign |
0.05 |
R8160:Kdm5b
|
UTSW |
1 |
134,541,657 (GRCm39) |
missense |
probably damaging |
1.00 |
R8527:Kdm5b
|
UTSW |
1 |
134,533,512 (GRCm39) |
missense |
possibly damaging |
0.78 |
R8542:Kdm5b
|
UTSW |
1 |
134,533,512 (GRCm39) |
missense |
possibly damaging |
0.78 |
R8930:Kdm5b
|
UTSW |
1 |
134,544,010 (GRCm39) |
missense |
probably damaging |
1.00 |
R8932:Kdm5b
|
UTSW |
1 |
134,544,010 (GRCm39) |
missense |
probably damaging |
1.00 |
R8950:Kdm5b
|
UTSW |
1 |
134,541,664 (GRCm39) |
missense |
possibly damaging |
0.84 |
R9089:Kdm5b
|
UTSW |
1 |
134,535,506 (GRCm39) |
missense |
probably damaging |
0.98 |
R9109:Kdm5b
|
UTSW |
1 |
134,528,493 (GRCm39) |
critical splice donor site |
probably null |
|
R9133:Kdm5b
|
UTSW |
1 |
134,530,323 (GRCm39) |
missense |
probably benign |
|
R9298:Kdm5b
|
UTSW |
1 |
134,528,493 (GRCm39) |
critical splice donor site |
probably null |
|
R9423:Kdm5b
|
UTSW |
1 |
134,515,705 (GRCm39) |
missense |
possibly damaging |
0.85 |
R9630:Kdm5b
|
UTSW |
1 |
134,512,971 (GRCm39) |
critical splice donor site |
probably null |
|
R9670:Kdm5b
|
UTSW |
1 |
134,558,240 (GRCm39) |
nonsense |
probably null |
|
X0063:Kdm5b
|
UTSW |
1 |
134,516,614 (GRCm39) |
missense |
probably benign |
0.07 |
Z1176:Kdm5b
|
UTSW |
1 |
134,552,773 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1177:Kdm5b
|
UTSW |
1 |
134,523,536 (GRCm39) |
frame shift |
probably null |
|
|
Predicted Primers |
PCR Primer
(F):5'- CCCGAGGAGATAAGCACTTG -3'
(R):5'- TCCAGCACTTACATTCAGGATCC -3'
Sequencing Primer
(F):5'- GGTTATTGTCTTCAGGCACACCAG -3'
(R):5'- GGATCCAATAAAATACTCACCTCTG -3'
|
Posted On |
2016-03-16 |