Incidental Mutation 'R4926:Chd5'
ID |
379017 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Chd5
|
Ensembl Gene |
ENSMUSG00000005045 |
Gene Name |
chromodomain helicase DNA binding protein 5 |
Synonyms |
B230399N07Rik, 4930532L22Rik |
MMRRC Submission |
042527-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R4926 (G1)
|
Quality Score |
207 |
Status
|
Validated
|
Chromosome |
4 |
Chromosomal Location |
152423108-152474651 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to C
at 152467768 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Serine to Proline
at position 1689
(S1689P)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000132600
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000005175]
[ENSMUST00000030775]
[ENSMUST00000164662]
|
AlphaFold |
A2A8L1 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000005175
AA Change: S1726P
PolyPhen 2
Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
|
SMART Domains |
Protein: ENSMUSP00000005175 Gene: ENSMUSG00000005045 AA Change: S1726P
Domain | Start | End | E-Value | Type |
low complexity region
|
17 |
40 |
N/A |
INTRINSIC |
low complexity region
|
46 |
71 |
N/A |
INTRINSIC |
low complexity region
|
76 |
92 |
N/A |
INTRINSIC |
coiled coil region
|
96 |
126 |
N/A |
INTRINSIC |
Pfam:CHDNT
|
149 |
203 |
2e-32 |
PFAM |
low complexity region
|
209 |
220 |
N/A |
INTRINSIC |
low complexity region
|
256 |
273 |
N/A |
INTRINSIC |
low complexity region
|
291 |
304 |
N/A |
INTRINSIC |
low complexity region
|
323 |
333 |
N/A |
INTRINSIC |
PHD
|
347 |
390 |
1.09e-14 |
SMART |
RING
|
348 |
389 |
4.48e-1 |
SMART |
low complexity region
|
400 |
416 |
N/A |
INTRINSIC |
PHD
|
420 |
463 |
3.29e-14 |
SMART |
RING
|
421 |
462 |
4.15e0 |
SMART |
CHROMO
|
468 |
548 |
2.52e-13 |
SMART |
CHROMO
|
592 |
649 |
1.34e-8 |
SMART |
low complexity region
|
657 |
678 |
N/A |
INTRINSIC |
DEXDc
|
698 |
910 |
8.34e-33 |
SMART |
low complexity region
|
1023 |
1038 |
N/A |
INTRINSIC |
HELICc
|
1056 |
1140 |
4.02e-26 |
SMART |
DUF1087
|
1297 |
1361 |
2.78e-33 |
SMART |
DUF1086
|
1374 |
1533 |
5.11e-105 |
SMART |
low complexity region
|
1552 |
1567 |
N/A |
INTRINSIC |
low complexity region
|
1685 |
1701 |
N/A |
INTRINSIC |
Pfam:CHDCT2
|
1729 |
1901 |
1.7e-99 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000030775
AA Change: S1726P
PolyPhen 2
Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
|
SMART Domains |
Protein: ENSMUSP00000030775 Gene: ENSMUSG00000005045 AA Change: S1726P
Domain | Start | End | E-Value | Type |
low complexity region
|
17 |
40 |
N/A |
INTRINSIC |
low complexity region
|
46 |
71 |
N/A |
INTRINSIC |
low complexity region
|
76 |
92 |
N/A |
INTRINSIC |
coiled coil region
|
96 |
126 |
N/A |
INTRINSIC |
Pfam:CHDNT
|
150 |
203 |
9e-28 |
PFAM |
low complexity region
|
209 |
220 |
N/A |
INTRINSIC |
low complexity region
|
256 |
273 |
N/A |
INTRINSIC |
low complexity region
|
291 |
304 |
N/A |
INTRINSIC |
low complexity region
|
323 |
333 |
N/A |
INTRINSIC |
PHD
|
347 |
390 |
1.09e-14 |
SMART |
RING
|
348 |
389 |
4.48e-1 |
SMART |
low complexity region
|
400 |
416 |
N/A |
INTRINSIC |
PHD
|
420 |
463 |
3.29e-14 |
SMART |
RING
|
421 |
462 |
4.15e0 |
SMART |
CHROMO
|
468 |
548 |
2.52e-13 |
SMART |
CHROMO
|
592 |
649 |
1.34e-8 |
SMART |
low complexity region
|
657 |
678 |
N/A |
INTRINSIC |
DEXDc
|
698 |
910 |
8.34e-33 |
SMART |
low complexity region
|
1023 |
1038 |
N/A |
INTRINSIC |
HELICc
|
1056 |
1140 |
4.02e-26 |
SMART |
DUF1087
|
1297 |
1361 |
2.78e-33 |
SMART |
DUF1086
|
1374 |
1533 |
5.11e-105 |
SMART |
low complexity region
|
1552 |
1567 |
N/A |
INTRINSIC |
low complexity region
|
1685 |
1701 |
N/A |
INTRINSIC |
Pfam:CHDCT2
|
1730 |
1901 |
2.8e-93 |
PFAM |
low complexity region
|
1922 |
1936 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000124423
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000164662
AA Change: S1689P
PolyPhen 2
Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)
|
SMART Domains |
Protein: ENSMUSP00000132600 Gene: ENSMUSG00000005045 AA Change: S1689P
Domain | Start | End | E-Value | Type |
low complexity region
|
17 |
40 |
N/A |
INTRINSIC |
low complexity region
|
46 |
71 |
N/A |
INTRINSIC |
low complexity region
|
76 |
92 |
N/A |
INTRINSIC |
coiled coil region
|
96 |
126 |
N/A |
INTRINSIC |
Pfam:CHDNT
|
149 |
203 |
1.9e-32 |
PFAM |
low complexity region
|
209 |
220 |
N/A |
INTRINSIC |
low complexity region
|
256 |
273 |
N/A |
INTRINSIC |
low complexity region
|
291 |
304 |
N/A |
INTRINSIC |
low complexity region
|
323 |
333 |
N/A |
INTRINSIC |
PHD
|
347 |
390 |
1.09e-14 |
SMART |
RING
|
348 |
389 |
4.48e-1 |
SMART |
low complexity region
|
400 |
416 |
N/A |
INTRINSIC |
PHD
|
420 |
463 |
3.29e-14 |
SMART |
RING
|
421 |
462 |
4.15e0 |
SMART |
CHROMO
|
468 |
548 |
2.52e-13 |
SMART |
CHROMO
|
592 |
649 |
1.34e-8 |
SMART |
low complexity region
|
657 |
678 |
N/A |
INTRINSIC |
DEXDc
|
698 |
910 |
8.34e-33 |
SMART |
low complexity region
|
1023 |
1038 |
N/A |
INTRINSIC |
HELICc
|
1056 |
1140 |
4.02e-26 |
SMART |
DUF1087
|
1260 |
1324 |
2.78e-33 |
SMART |
DUF1086
|
1337 |
1496 |
5.11e-105 |
SMART |
low complexity region
|
1515 |
1530 |
N/A |
INTRINSIC |
low complexity region
|
1648 |
1664 |
N/A |
INTRINSIC |
Pfam:CHDCT2
|
1692 |
1864 |
1.7e-99 |
PFAM |
low complexity region
|
1885 |
1899 |
N/A |
INTRINSIC |
|
Meta Mutation Damage Score |
0.0780 |
Coding Region Coverage |
- 1x: 99.0%
- 3x: 98.2%
- 10x: 95.9%
- 20x: 91.3%
|
Validation Efficiency |
99% (87/88) |
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the chromodomain helicase DNA-binding protein family. Members of this family are characterized by a chromodomain, a helicase ATP-binding domain and an additional functional domain. This gene encodes a neuron-specific protein that may function in chromatin remodeling and gene transcription. This gene is a potential tumor suppressor gene that may play a role in the development of neuroblastoma. [provided by RefSeq, Feb 2012] PHENOTYPE: Mice homozygous for a knock-out allele exhibit male infertility with abnormal spermiogenesis and chromatin condensation. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 80 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
1700102P08Rik |
A |
T |
9: 108,272,498 (GRCm39) |
D136V |
probably damaging |
Het |
Ankrd17 |
G |
A |
5: 90,447,891 (GRCm39) |
R217W |
probably damaging |
Het |
Ankrd23 |
A |
T |
1: 36,571,068 (GRCm39) |
H102Q |
probably damaging |
Het |
Arfip2 |
G |
T |
7: 105,287,151 (GRCm39) |
R138S |
probably damaging |
Het |
Arhgap27 |
A |
T |
11: 103,229,949 (GRCm39) |
|
probably null |
Het |
Atg2a |
T |
C |
19: 6,307,563 (GRCm39) |
L1499P |
probably damaging |
Het |
Bnc2 |
A |
G |
4: 84,194,416 (GRCm39) |
S110P |
probably damaging |
Het |
Ccdc171 |
T |
C |
4: 83,476,829 (GRCm39) |
|
probably benign |
Het |
Ccdc7a |
A |
G |
8: 129,706,535 (GRCm39) |
|
probably benign |
Het |
Corin |
A |
G |
5: 72,529,525 (GRCm39) |
C212R |
probably damaging |
Het |
Cyp2c65 |
A |
G |
19: 39,049,597 (GRCm39) |
I42V |
probably benign |
Het |
Cyp3a25 |
G |
A |
5: 145,928,266 (GRCm39) |
R260C |
probably damaging |
Het |
Dock6 |
T |
C |
9: 21,757,087 (GRCm39) |
Y116C |
probably damaging |
Het |
Eif3a |
A |
G |
19: 60,751,656 (GRCm39) |
|
probably benign |
Het |
Epop |
T |
C |
11: 97,519,143 (GRCm39) |
D322G |
probably damaging |
Het |
Eps8l3 |
T |
A |
3: 107,798,004 (GRCm39) |
|
probably benign |
Het |
Exph5 |
T |
C |
9: 53,287,925 (GRCm39) |
S1669P |
possibly damaging |
Het |
Faah |
A |
T |
4: 115,856,823 (GRCm39) |
|
probably benign |
Het |
Fanca |
A |
G |
8: 124,030,724 (GRCm39) |
C453R |
probably benign |
Het |
Fcgbp |
T |
A |
7: 27,785,660 (GRCm39) |
C366S |
probably damaging |
Het |
Fmn2 |
A |
G |
1: 174,329,981 (GRCm39) |
T124A |
unknown |
Het |
Foxi3 |
C |
T |
6: 70,933,996 (GRCm39) |
S161L |
probably damaging |
Het |
Foxo3 |
A |
T |
10: 42,073,020 (GRCm39) |
V499E |
probably damaging |
Het |
Gas2l3 |
CACTCGTCATACT |
CACT |
10: 89,266,820 (GRCm39) |
|
probably benign |
Het |
Gbgt1 |
T |
C |
2: 28,393,182 (GRCm39) |
V90A |
probably damaging |
Het |
Gm839 |
A |
C |
6: 89,189,581 (GRCm39) |
|
noncoding transcript |
Het |
Gtf3c2 |
T |
C |
5: 31,326,467 (GRCm39) |
E348G |
possibly damaging |
Het |
Hnrnpm |
G |
T |
17: 33,868,775 (GRCm39) |
R551S |
probably damaging |
Het |
Hspa1l |
A |
G |
17: 35,197,199 (GRCm39) |
T413A |
possibly damaging |
Het |
Hspg2 |
T |
C |
4: 137,269,841 (GRCm39) |
Y2297H |
probably damaging |
Het |
Ighv1-81 |
T |
A |
12: 115,884,093 (GRCm39) |
I53L |
probably benign |
Het |
Kcnj11 |
C |
T |
7: 45,748,544 (GRCm39) |
V260I |
probably benign |
Het |
Krt84 |
A |
G |
15: 101,438,689 (GRCm39) |
V266A |
probably benign |
Het |
Lgals3bp |
T |
C |
11: 118,284,781 (GRCm39) |
Y266C |
probably damaging |
Het |
Lrrc41 |
T |
C |
4: 115,946,521 (GRCm39) |
V412A |
possibly damaging |
Het |
Map4k4 |
A |
T |
1: 40,056,385 (GRCm39) |
E1023D |
probably damaging |
Het |
Mark3 |
T |
A |
12: 111,584,758 (GRCm39) |
L118* |
probably null |
Het |
Mrgpra9 |
T |
A |
7: 46,884,759 (GRCm39) |
T303S |
possibly damaging |
Het |
Mterf4 |
T |
C |
1: 93,232,647 (GRCm39) |
E68G |
probably benign |
Het |
Nckap5 |
A |
C |
1: 126,456,378 (GRCm39) |
|
probably benign |
Het |
Nox3 |
T |
A |
17: 3,720,169 (GRCm39) |
T339S |
probably damaging |
Het |
Nrip2 |
A |
C |
6: 128,385,337 (GRCm39) |
H256P |
probably benign |
Het |
Oas1d |
T |
C |
5: 121,053,831 (GRCm39) |
V97A |
probably benign |
Het |
Obox2 |
T |
A |
7: 15,131,102 (GRCm39) |
|
probably null |
Het |
Opa1 |
T |
C |
16: 29,467,791 (GRCm39) |
F989S |
possibly damaging |
Het |
Or10g9 |
T |
C |
9: 39,912,319 (GRCm39) |
|
probably null |
Het |
Padi1 |
T |
A |
4: 140,552,158 (GRCm39) |
I429F |
probably damaging |
Het |
Paics |
A |
G |
5: 77,109,051 (GRCm39) |
D163G |
probably damaging |
Het |
Pik3c2b |
G |
T |
1: 133,027,364 (GRCm39) |
E1288* |
probably null |
Het |
Prdm16 |
A |
T |
4: 154,426,009 (GRCm39) |
V593D |
possibly damaging |
Het |
Prpf39 |
A |
G |
12: 65,090,830 (GRCm39) |
I165M |
possibly damaging |
Het |
Pth2r |
A |
G |
1: 65,361,143 (GRCm39) |
T26A |
probably benign |
Het |
Ptpn21 |
T |
C |
12: 98,681,454 (GRCm39) |
|
probably null |
Het |
Rab44 |
C |
T |
17: 29,358,529 (GRCm39) |
A239V |
probably benign |
Het |
Rtcb |
T |
C |
10: 85,791,600 (GRCm39) |
N52S |
probably benign |
Het |
Sapcd2 |
T |
A |
2: 25,263,578 (GRCm39) |
|
probably null |
Het |
Scaf11 |
T |
C |
15: 96,316,123 (GRCm39) |
E1147G |
possibly damaging |
Het |
Selenoo |
T |
C |
15: 88,983,881 (GRCm39) |
Y595H |
probably damaging |
Het |
Slc2a5 |
G |
T |
4: 150,205,199 (GRCm39) |
E3* |
probably null |
Het |
Snw1 |
A |
G |
12: 87,499,428 (GRCm39) |
V391A |
probably benign |
Het |
Sorbs2 |
A |
G |
8: 46,249,254 (GRCm39) |
K755R |
probably benign |
Het |
Sorbs3 |
G |
T |
14: 70,424,394 (GRCm39) |
P513T |
probably damaging |
Het |
Sowaha |
T |
A |
11: 53,370,337 (GRCm39) |
E133V |
possibly damaging |
Het |
Srsf5 |
T |
C |
12: 80,994,075 (GRCm39) |
|
probably benign |
Het |
St8sia5 |
T |
A |
18: 77,342,478 (GRCm39) |
M396K |
possibly damaging |
Het |
Tcp11l1 |
T |
C |
2: 104,512,130 (GRCm39) |
I501V |
probably benign |
Het |
Tert |
A |
G |
13: 73,796,508 (GRCm39) |
K1080E |
possibly damaging |
Het |
Tescl |
T |
A |
7: 24,033,323 (GRCm39) |
M1L |
possibly damaging |
Het |
Thop1 |
T |
A |
10: 80,909,201 (GRCm39) |
|
probably null |
Het |
Tmtc4 |
T |
C |
14: 123,210,618 (GRCm39) |
H80R |
probably damaging |
Het |
Toe1 |
C |
T |
4: 116,661,729 (GRCm39) |
S480N |
probably damaging |
Het |
Trap1 |
C |
A |
16: 3,863,352 (GRCm39) |
V557F |
probably benign |
Het |
Trim30d |
T |
C |
7: 104,132,564 (GRCm39) |
E91G |
probably benign |
Het |
Ttf1 |
C |
T |
2: 28,954,668 (GRCm39) |
H11Y |
possibly damaging |
Het |
Ttll8 |
C |
A |
15: 88,798,368 (GRCm39) |
G789V |
probably damaging |
Het |
Ulk4 |
A |
G |
9: 121,087,798 (GRCm39) |
F298S |
probably benign |
Het |
Wwc1 |
C |
T |
11: 35,780,227 (GRCm39) |
A243T |
probably benign |
Het |
Zfp248 |
A |
C |
6: 118,406,787 (GRCm39) |
H267Q |
possibly damaging |
Het |
Zfyve26 |
T |
A |
12: 79,321,785 (GRCm39) |
M945L |
probably benign |
Het |
Zup1 |
T |
C |
10: 33,825,434 (GRCm39) |
D16G |
probably damaging |
Het |
|
Other mutations in Chd5 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00537:Chd5
|
APN |
4 |
152,445,059 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00886:Chd5
|
APN |
4 |
152,444,156 (GRCm39) |
missense |
probably benign |
0.00 |
IGL00963:Chd5
|
APN |
4 |
152,467,395 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01399:Chd5
|
APN |
4 |
152,441,144 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01571:Chd5
|
APN |
4 |
152,468,572 (GRCm39) |
splice site |
probably benign |
|
IGL01606:Chd5
|
APN |
4 |
152,445,432 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01636:Chd5
|
APN |
4 |
152,469,110 (GRCm39) |
nonsense |
probably null |
|
IGL02009:Chd5
|
APN |
4 |
152,450,670 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02417:Chd5
|
APN |
4 |
152,451,751 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL02504:Chd5
|
APN |
4 |
152,447,779 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02508:Chd5
|
APN |
4 |
152,447,481 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02597:Chd5
|
APN |
4 |
152,456,169 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02608:Chd5
|
APN |
4 |
152,440,564 (GRCm39) |
missense |
possibly damaging |
0.94 |
IGL02612:Chd5
|
APN |
4 |
152,445,033 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02658:Chd5
|
APN |
4 |
152,445,050 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02662:Chd5
|
APN |
4 |
152,456,588 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02676:Chd5
|
APN |
4 |
152,440,530 (GRCm39) |
splice site |
probably benign |
|
IGL02871:Chd5
|
APN |
4 |
152,461,142 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02942:Chd5
|
APN |
4 |
152,470,182 (GRCm39) |
missense |
probably damaging |
0.98 |
IGL02956:Chd5
|
APN |
4 |
152,464,413 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03286:Chd5
|
APN |
4 |
152,469,952 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03348:Chd5
|
APN |
4 |
152,461,142 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03398:Chd5
|
APN |
4 |
152,461,539 (GRCm39) |
missense |
probably damaging |
0.97 |
PIT1430001:Chd5
|
UTSW |
4 |
152,455,094 (GRCm39) |
missense |
probably damaging |
1.00 |
PIT4151001:Chd5
|
UTSW |
4 |
152,462,986 (GRCm39) |
missense |
probably damaging |
0.99 |
R0079:Chd5
|
UTSW |
4 |
152,470,206 (GRCm39) |
missense |
probably damaging |
1.00 |
R0241:Chd5
|
UTSW |
4 |
152,450,589 (GRCm39) |
missense |
probably damaging |
1.00 |
R0241:Chd5
|
UTSW |
4 |
152,450,589 (GRCm39) |
missense |
probably damaging |
1.00 |
R0379:Chd5
|
UTSW |
4 |
152,467,778 (GRCm39) |
missense |
probably benign |
0.00 |
R0388:Chd5
|
UTSW |
4 |
152,456,101 (GRCm39) |
missense |
probably damaging |
1.00 |
R0675:Chd5
|
UTSW |
4 |
152,470,407 (GRCm39) |
missense |
probably benign |
0.06 |
R0730:Chd5
|
UTSW |
4 |
152,432,441 (GRCm39) |
missense |
possibly damaging |
0.72 |
R0799:Chd5
|
UTSW |
4 |
152,468,616 (GRCm39) |
missense |
probably damaging |
1.00 |
R0800:Chd5
|
UTSW |
4 |
152,440,614 (GRCm39) |
missense |
probably damaging |
1.00 |
R1276:Chd5
|
UTSW |
4 |
152,463,191 (GRCm39) |
missense |
probably damaging |
1.00 |
R1752:Chd5
|
UTSW |
4 |
152,459,590 (GRCm39) |
missense |
probably damaging |
1.00 |
R1753:Chd5
|
UTSW |
4 |
152,463,272 (GRCm39) |
missense |
probably damaging |
1.00 |
R1843:Chd5
|
UTSW |
4 |
152,470,263 (GRCm39) |
missense |
probably damaging |
1.00 |
R1850:Chd5
|
UTSW |
4 |
152,454,990 (GRCm39) |
missense |
probably damaging |
1.00 |
R1851:Chd5
|
UTSW |
4 |
152,462,727 (GRCm39) |
missense |
probably damaging |
0.97 |
R1859:Chd5
|
UTSW |
4 |
152,464,980 (GRCm39) |
missense |
probably benign |
0.00 |
R1983:Chd5
|
UTSW |
4 |
152,469,123 (GRCm39) |
missense |
possibly damaging |
0.89 |
R2404:Chd5
|
UTSW |
4 |
152,451,791 (GRCm39) |
missense |
probably damaging |
1.00 |
R2897:Chd5
|
UTSW |
4 |
152,456,572 (GRCm39) |
missense |
probably damaging |
1.00 |
R2898:Chd5
|
UTSW |
4 |
152,456,572 (GRCm39) |
missense |
probably damaging |
1.00 |
R3893:Chd5
|
UTSW |
4 |
152,445,113 (GRCm39) |
missense |
probably damaging |
1.00 |
R3938:Chd5
|
UTSW |
4 |
152,461,512 (GRCm39) |
missense |
probably benign |
0.05 |
R4707:Chd5
|
UTSW |
4 |
152,445,039 (GRCm39) |
missense |
probably damaging |
1.00 |
R4754:Chd5
|
UTSW |
4 |
152,462,203 (GRCm39) |
missense |
probably damaging |
0.99 |
R4911:Chd5
|
UTSW |
4 |
152,445,129 (GRCm39) |
missense |
probably damaging |
1.00 |
R4924:Chd5
|
UTSW |
4 |
152,450,886 (GRCm39) |
missense |
possibly damaging |
0.50 |
R5256:Chd5
|
UTSW |
4 |
152,456,554 (GRCm39) |
missense |
probably benign |
0.01 |
R5524:Chd5
|
UTSW |
4 |
152,461,087 (GRCm39) |
missense |
probably benign |
|
R5552:Chd5
|
UTSW |
4 |
152,470,272 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5895:Chd5
|
UTSW |
4 |
152,464,389 (GRCm39) |
missense |
probably benign |
0.13 |
R5945:Chd5
|
UTSW |
4 |
152,464,408 (GRCm39) |
missense |
probably benign |
|
R6007:Chd5
|
UTSW |
4 |
152,463,878 (GRCm39) |
missense |
probably null |
1.00 |
R6039:Chd5
|
UTSW |
4 |
152,438,078 (GRCm39) |
small deletion |
probably benign |
|
R6039:Chd5
|
UTSW |
4 |
152,438,078 (GRCm39) |
small deletion |
probably benign |
|
R6172:Chd5
|
UTSW |
4 |
152,463,848 (GRCm39) |
missense |
probably damaging |
1.00 |
R6173:Chd5
|
UTSW |
4 |
152,463,848 (GRCm39) |
missense |
probably damaging |
1.00 |
R6323:Chd5
|
UTSW |
4 |
152,451,791 (GRCm39) |
missense |
probably damaging |
0.99 |
R6331:Chd5
|
UTSW |
4 |
152,466,865 (GRCm39) |
missense |
probably benign |
0.02 |
R6495:Chd5
|
UTSW |
4 |
152,451,829 (GRCm39) |
missense |
probably damaging |
1.00 |
R6528:Chd5
|
UTSW |
4 |
152,441,133 (GRCm39) |
missense |
probably damaging |
1.00 |
R6849:Chd5
|
UTSW |
4 |
152,462,995 (GRCm39) |
missense |
probably damaging |
1.00 |
R6854:Chd5
|
UTSW |
4 |
152,467,395 (GRCm39) |
missense |
probably damaging |
1.00 |
R6859:Chd5
|
UTSW |
4 |
152,462,664 (GRCm39) |
missense |
probably damaging |
1.00 |
R6999:Chd5
|
UTSW |
4 |
152,458,891 (GRCm39) |
missense |
probably damaging |
1.00 |
R7034:Chd5
|
UTSW |
4 |
152,445,398 (GRCm39) |
missense |
possibly damaging |
0.89 |
R7110:Chd5
|
UTSW |
4 |
152,469,896 (GRCm39) |
missense |
probably damaging |
1.00 |
R7361:Chd5
|
UTSW |
4 |
152,447,745 (GRCm39) |
missense |
probably damaging |
0.99 |
R7397:Chd5
|
UTSW |
4 |
152,452,469 (GRCm39) |
missense |
possibly damaging |
0.82 |
R7440:Chd5
|
UTSW |
4 |
152,469,108 (GRCm39) |
missense |
probably benign |
0.01 |
R7489:Chd5
|
UTSW |
4 |
152,457,925 (GRCm39) |
missense |
probably damaging |
1.00 |
R7810:Chd5
|
UTSW |
4 |
152,443,032 (GRCm39) |
missense |
probably damaging |
0.97 |
R8057:Chd5
|
UTSW |
4 |
152,450,829 (GRCm39) |
missense |
probably damaging |
1.00 |
R8078:Chd5
|
UTSW |
4 |
152,445,448 (GRCm39) |
missense |
possibly damaging |
0.90 |
R8092:Chd5
|
UTSW |
4 |
152,463,261 (GRCm39) |
missense |
probably damaging |
0.99 |
R8170:Chd5
|
UTSW |
4 |
152,461,040 (GRCm39) |
missense |
probably benign |
0.26 |
R8255:Chd5
|
UTSW |
4 |
152,463,880 (GRCm39) |
missense |
probably damaging |
0.99 |
R8348:Chd5
|
UTSW |
4 |
152,445,173 (GRCm39) |
missense |
probably damaging |
0.98 |
R8448:Chd5
|
UTSW |
4 |
152,445,173 (GRCm39) |
missense |
probably damaging |
0.98 |
R8478:Chd5
|
UTSW |
4 |
152,441,147 (GRCm39) |
nonsense |
probably null |
|
R8482:Chd5
|
UTSW |
4 |
152,441,147 (GRCm39) |
nonsense |
probably null |
|
R8670:Chd5
|
UTSW |
4 |
152,469,953 (GRCm39) |
missense |
possibly damaging |
0.81 |
R8733:Chd5
|
UTSW |
4 |
152,463,923 (GRCm39) |
missense |
probably damaging |
1.00 |
R8743:Chd5
|
UTSW |
4 |
152,450,862 (GRCm39) |
missense |
probably benign |
0.03 |
R8941:Chd5
|
UTSW |
4 |
152,463,305 (GRCm39) |
missense |
possibly damaging |
0.82 |
R8961:Chd5
|
UTSW |
4 |
152,467,489 (GRCm39) |
splice site |
probably benign |
|
R9103:Chd5
|
UTSW |
4 |
152,461,444 (GRCm39) |
missense |
possibly damaging |
0.62 |
R9160:Chd5
|
UTSW |
4 |
152,469,916 (GRCm39) |
missense |
probably damaging |
0.99 |
R9221:Chd5
|
UTSW |
4 |
152,456,122 (GRCm39) |
missense |
probably damaging |
0.96 |
R9399:Chd5
|
UTSW |
4 |
152,468,592 (GRCm39) |
missense |
probably benign |
0.06 |
R9429:Chd5
|
UTSW |
4 |
152,447,364 (GRCm39) |
missense |
probably damaging |
0.99 |
R9635:Chd5
|
UTSW |
4 |
152,461,079 (GRCm39) |
missense |
possibly damaging |
0.87 |
R9783:Chd5
|
UTSW |
4 |
152,458,865 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1176:Chd5
|
UTSW |
4 |
152,462,936 (GRCm39) |
missense |
probably damaging |
0.98 |
|
Predicted Primers |
PCR Primer
(F):5'- GATGATGGTCCATCGTATGCCC -3'
(R):5'- CCAGATGGCCAGATGACAAG -3'
Sequencing Primer
(F):5'- CCTCTTAGCAATACTGGAGCAATGG -3'
(R):5'- TTTTGGGCAGTCACCAGAAGC -3'
|
Posted On |
2016-04-15 |