Incidental Mutation 'R4932:Dbf4'
ID380621
Institutional Source Beutler Lab
Gene Symbol Dbf4
Ensembl Gene ENSMUSG00000002297
Gene NameDBF4 zinc finger
SynonymsAsk
Accession Numbers
Is this an essential gene? Possibly non essential (E-score: 0.458) question?
Stock #R4932 (G1)
Quality Score225
Status Not validated
Chromosome5
Chromosomal Location8396973-8422716 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) G to T at 8398039 bp
ZygosityHeterozygous
Amino Acid Change Histidine to Glutamine at position 390 (H390Q)
Ref Sequence ENSEMBL: ENSMUSP00000132906 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000002368] [ENSMUST00000168500] [ENSMUST00000171808]
Predicted Effect probably benign
Transcript: ENSMUST00000002368
AA Change: H389Q

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
SMART Domains Protein: ENSMUSP00000002368
Gene: ENSMUSG00000002297
AA Change: H389Q

DomainStartEndE-ValueType
Blast:BRCT 44 181 9e-85 BLAST
low complexity region 182 204 N/A INTRINSIC
ZnF_DBF 287 334 7.09e-28 SMART
low complexity region 643 657 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000163141
SMART Domains Protein: ENSMUSP00000129317
Gene: ENSMUSG00000002297

DomainStartEndE-ValueType
ZnF_DBF 19 66 7.09e-28 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000166364
Predicted Effect unknown
Transcript: ENSMUST00000168500
AA Change: P349T
SMART Domains Protein: ENSMUSP00000132985
Gene: ENSMUSG00000002297
AA Change: P349T

DomainStartEndE-ValueType
Pfam:BRCT 41 179 2e-7 PFAM
low complexity region 182 204 N/A INTRINSIC
PDB:4F9C|B 210 308 2e-42 PDB
Predicted Effect noncoding transcript
Transcript: ENSMUST00000168637
Predicted Effect probably benign
Transcript: ENSMUST00000171808
AA Change: H390Q

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
SMART Domains Protein: ENSMUSP00000132906
Gene: ENSMUSG00000002297
AA Change: H390Q

DomainStartEndE-ValueType
Blast:BRCT 44 181 9e-85 BLAST
low complexity region 182 204 N/A INTRINSIC
ZnF_DBF 288 335 7.09e-28 SMART
low complexity region 644 658 N/A INTRINSIC
Coding Region Coverage
  • 1x: 99.1%
  • 3x: 98.4%
  • 10x: 96.5%
  • 20x: 93.0%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 84 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4933417A18Rik A T 13: 34,932,630 T121S possibly damaging Het
Abcf1 A T 17: 35,959,450 V616E possibly damaging Het
Adam21 A G 12: 81,558,918 V690A probably benign Het
Afg3l1 A T 8: 123,501,380 T635S probably damaging Het
Ahcyl2 T A 6: 29,890,701 M390K probably benign Het
Ank3 T A 10: 69,898,223 probably null Het
Arhgef3 A T 14: 27,384,213 K151N probably damaging Het
Ccr3 T G 9: 124,029,006 F126C probably damaging Het
Ccser1 A G 6: 61,718,191 D170G possibly damaging Het
Celsr2 T A 3: 108,402,758 D1552V probably damaging Het
Cfap69 G A 5: 5,625,820 L265F probably damaging Het
Chrna9 C T 5: 65,969,190 R92* probably null Het
Cog3 A T 14: 75,732,954 V341D probably damaging Het
Csmd1 C A 8: 16,023,765 R2072L probably damaging Het
Dcaf4 T A 12: 83,532,304 C166S possibly damaging Het
Dclk3 T A 9: 111,468,042 L218Q possibly damaging Het
Dip2b T A 15: 100,171,722 W643R probably damaging Het
Dip2c A G 13: 9,623,972 K1091E probably damaging Het
Dis3 T A 14: 99,088,904 H415L probably damaging Het
Dnah7a T A 1: 53,503,578 I2478F possibly damaging Het
Dnah8 G A 17: 30,748,568 D2585N probably benign Het
Doc2a T C 7: 126,848,580 probably benign Het
Dph5 A T 3: 115,899,807 M125L probably benign Het
Dst A T 1: 34,228,683 T5247S possibly damaging Het
Eno4 T G 19: 58,964,457 V477G possibly damaging Het
Exosc8 T C 3: 54,729,290 I207V possibly damaging Het
Fam173a T G 17: 25,791,678 probably null Het
Fat4 T A 3: 39,007,203 S4312T probably benign Het
Fgfr2 T C 7: 130,241,277 D126G probably damaging Het
Fgfr4 A G 13: 55,168,170 T799A unknown Het
Gcn1l1 A T 5: 115,592,144 D839V probably benign Het
Gprin3 A G 6: 59,354,173 V383A probably benign Het
Gpt T C 15: 76,698,840 V361A probably benign Het
Hepacam G A 9: 37,381,764 C217Y probably damaging Het
Hsp90aa1 A T 12: 110,693,717 Y382N probably damaging Het
Htr2a T A 14: 74,642,022 N30K probably benign Het
Jhy A T 9: 40,961,003 M70K possibly damaging Het
Lrrc19 T C 4: 94,640,937 Y36C probably damaging Het
Madcam1 C T 10: 79,665,613 Q171* probably null Het
Mcm8 G A 2: 132,838,709 M544I probably benign Het
Mdga1 C T 17: 29,857,606 G64E probably damaging Het
Mettl7a1 T A 15: 100,305,106 F87Y probably benign Het
Mmp3 A G 9: 7,446,994 D58G probably benign Het
Ms4a10 T C 19: 10,964,768 Y123C probably damaging Het
Ms4a4d T A 19: 11,557,932 I198K probably benign Het
Mthfd1l A T 10: 3,980,241 D112V probably benign Het
N4bp2l2 A C 5: 150,643,141 S567R probably benign Het
Ndufaf2 A G 13: 108,158,476 Y32H probably damaging Het
Nup153 T A 13: 46,712,737 K182* probably null Het
Olfr1186 A G 2: 88,525,735 T51A probably benign Het
Olfr481 T A 7: 108,081,574 V260E probably damaging Het
Olfr551 A G 7: 102,588,416 F109S probably damaging Het
Otoa T C 7: 121,155,135 S928P probably damaging Het
Oxct2a T C 4: 123,322,703 D295G probably benign Het
P4ha2 C A 11: 54,125,020 T411K probably benign Het
Plcg2 A T 8: 117,607,083 Q865L probably benign Het
Prepl G T 17: 85,078,504 T244K possibly damaging Het
Ptpro A T 6: 137,411,105 K776* probably null Het
Rc3h2 T C 2: 37,389,832 K462E possibly damaging Het
Scn10a A G 9: 119,687,874 probably null Het
Serpinb1c A G 13: 32,882,164 V266A probably damaging Het
Slc6a20b T A 9: 123,604,796 N326Y probably damaging Het
Spcs2 C T 7: 99,858,831 G16D possibly damaging Het
Spns3 T C 11: 72,499,495 D441G possibly damaging Het
Srsf4 A G 4: 131,891,245 D49G probably damaging Het
Tec A T 5: 72,760,393 C494* probably null Het
Tecpr1 A T 5: 144,204,658 Y798N probably damaging Het
Trim56 C T 5: 137,114,489 E58K probably damaging Het
Ttn A T 2: 76,796,134 D13146E probably damaging Het
Ube2q1 A T 3: 89,779,483 K46* probably null Het
Ucn G T 5: 31,138,498 T8K probably benign Het
Usp25 T C 16: 77,033,982 probably null Het
Usp48 A T 4: 137,615,833 Q430L probably benign Het
Usp48 A T 4: 137,615,834 probably null Het
Vill A T 9: 119,061,511 D164V probably damaging Het
Vmn2r91 T A 17: 18,136,489 M806K possibly damaging Het
Wdfy4 T A 14: 33,029,013 Y2256F probably damaging Het
Wsb1 A G 11: 79,251,000 S64P probably damaging Het
Zc3h11a C A 1: 133,624,612 V586F probably benign Het
Zc3h12d A G 10: 7,853,250 D126G probably damaging Het
Zfp296 G T 7: 19,579,712 C164F possibly damaging Het
Zfp442 T A 2: 150,409,715 H89L possibly damaging Het
Zfp82 T A 7: 30,056,887 probably null Het
Zmynd8 A G 2: 165,834,951 V249A possibly damaging Het
Other mutations in Dbf4
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01585:Dbf4 APN 5 8408492 critical splice donor site probably null
IGL02086:Dbf4 APN 5 8403189 missense probably benign 0.09
IGL02582:Dbf4 APN 5 8403172 missense probably benign 0.32
IGL02711:Dbf4 APN 5 8408235 missense probably benign 0.08
R1201:Dbf4 UTSW 5 8397498 missense possibly damaging 0.80
R1823:Dbf4 UTSW 5 8397539 missense probably benign 0.00
R1863:Dbf4 UTSW 5 8397375 nonsense probably null
R2237:Dbf4 UTSW 5 8408542 missense possibly damaging 0.51
R2276:Dbf4 UTSW 5 8421333 missense possibly damaging 0.91
R2279:Dbf4 UTSW 5 8421333 missense possibly damaging 0.91
R4774:Dbf4 UTSW 5 8403062 intron probably benign
R4839:Dbf4 UTSW 5 8408263 nonsense probably null
R6009:Dbf4 UTSW 5 8403718 missense probably damaging 0.99
R6141:Dbf4 UTSW 5 8408545 missense possibly damaging 0.92
R6236:Dbf4 UTSW 5 8398579 intron probably benign
R6583:Dbf4 UTSW 5 8398143 missense probably damaging 0.96
R6663:Dbf4 UTSW 5 8403184 missense probably benign 0.00
Predicted Primers PCR Primer
(F):5'- AGCTGTGCATACTCCTGCTC -3'
(R):5'- AGGTGGTACCCTAGTTCAGTTTAGG -3'

Sequencing Primer
(F):5'- ATACTCCTGCTCTGGGTCAGG -3'
(R):5'- AGGGTTATCCTAAGTCAGTTTCC -3'
Posted On2016-04-15