Incidental Mutation 'R4933:Shc3'
ID 380738
Institutional Source Beutler Lab
Gene Symbol Shc3
Ensembl Gene ENSMUSG00000021448
Gene Name src homology 2 domain-containing transforming protein C3
Synonyms ShcC, Rai, N-Shc
MMRRC Submission 042533-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.078) question?
Stock # R4933 (G1)
Quality Score 225
Status Validated
Chromosome 13
Chromosomal Location 51585077-51723523 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) G to T at 51596805 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Asparagine at position 406 (T406N)
Ref Sequence ENSEMBL: ENSMUSP00000021898 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000021898] [ENSMUST00000223543]
AlphaFold Q61120
Predicted Effect probably benign
Transcript: ENSMUST00000021898
AA Change: T406N

PolyPhen 2 Score 0.029 (Sensitivity: 0.95; Specificity: 0.82)
SMART Domains Protein: ENSMUSP00000021898
Gene: ENSMUSG00000021448
AA Change: T406N

DomainStartEndE-ValueType
PTB 30 194 5.36e-41 SMART
SH2 377 456 6.38e-26 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000223543
Meta Mutation Damage Score 0.1382 question?
Coding Region Coverage
  • 1x: 99.0%
  • 3x: 98.1%
  • 10x: 95.4%
  • 20x: 89.3%
Validation Efficiency 97% (73/75)
MGI Phenotype PHENOTYPE: Mice homozygous for disruptions in this gene display a normal phenotype. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 55 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
2610021A01Rik A G 7: 41,276,226 (GRCm39) E643G probably damaging Het
Abca2 T C 2: 25,334,839 (GRCm39) V1937A probably benign Het
Acot10 A T 15: 20,666,416 (GRCm39) N108K possibly damaging Het
Agtpbp1 A T 13: 59,648,386 (GRCm39) M478K probably benign Het
Akirin1 G A 4: 123,630,651 (GRCm39) S191F probably damaging Het
Aoc1l3 T C 6: 48,964,426 (GRCm39) S145P probably damaging Het
Aurkb T C 11: 68,938,970 (GRCm39) probably benign Het
Cabyr T C 18: 12,877,549 (GRCm39) probably benign Het
Ccp110 A G 7: 118,324,542 (GRCm39) E688G probably damaging Het
Champ1 T A 8: 13,929,137 (GRCm39) S432T probably benign Het
Crybg1 T A 10: 43,875,209 (GRCm39) N633I probably damaging Het
Dagla A T 19: 10,247,079 (GRCm39) probably null Het
Dkkl1 A T 7: 44,860,949 (GRCm39) L10Q probably null Het
Dnah8 G A 17: 30,967,542 (GRCm39) D2585N probably benign Het
Fndc7 G T 3: 108,783,986 (GRCm39) Q208K probably benign Het
Gins4 A T 8: 23,724,796 (GRCm39) C53S probably damaging Het
Gja8 T A 3: 96,826,351 (GRCm39) probably benign Het
Golph3l T A 3: 95,524,734 (GRCm39) N328K probably benign Het
Haus6 A C 4: 86,503,524 (GRCm39) probably benign Het
Hdac5 A G 11: 102,091,389 (GRCm39) probably benign Het
Ide A G 19: 37,255,155 (GRCm39) Y883H unknown Het
Igf2r A G 17: 12,910,764 (GRCm39) probably null Het
Kdm3b T C 18: 34,943,446 (GRCm39) Y723H probably damaging Het
Kif21b G A 1: 136,079,063 (GRCm39) probably null Het
Lancl1 A T 1: 67,060,193 (GRCm39) N77K probably benign Het
Lyst T A 13: 13,812,349 (GRCm39) N920K probably damaging Het
Lyst G A 13: 13,933,963 (GRCm39) V3554I probably benign Het
Map1a G A 2: 121,136,386 (GRCm39) A2163T probably damaging Het
Mapk7 G T 11: 61,384,734 (GRCm39) probably benign Het
Myo10 C A 15: 25,781,204 (GRCm39) Q154K probably damaging Het
Or2a7 C T 6: 43,151,255 (GRCm39) L112F probably benign Het
Or2h15 A G 17: 38,441,441 (GRCm39) I214T probably damaging Het
Pcdhgb2 G A 18: 37,825,267 (GRCm39) V753M probably benign Het
Pnn T A 12: 59,117,013 (GRCm39) L195Q probably damaging Het
Pot1a A G 6: 25,771,540 (GRCm39) V227A possibly damaging Het
Ppp1r21 T A 17: 88,855,049 (GRCm39) D109E probably benign Het
Prr15l G A 11: 96,825,588 (GRCm39) G73S probably damaging Het
Rnf148 A G 6: 23,654,339 (GRCm39) F219S probably benign Het
Rnpep C A 1: 135,194,764 (GRCm39) probably benign Het
Ryr1 T C 7: 28,803,723 (GRCm39) T643A probably damaging Het
Ryr2 A T 13: 11,960,831 (GRCm39) C36S probably damaging Het
Slit3 G T 11: 35,579,420 (GRCm39) G1199V probably damaging Het
Spata6l G T 19: 28,919,175 (GRCm39) H195N possibly damaging Het
Sptbn5 G A 2: 119,880,601 (GRCm39) noncoding transcript Het
St8sia6 T C 2: 13,670,253 (GRCm39) N236D probably damaging Het
Stpg1 A T 4: 135,233,727 (GRCm39) Q3L probably benign Het
Sult3a1 T A 10: 33,742,550 (GRCm39) I59N probably damaging Het
Vmn1r208 T G 13: 22,956,958 (GRCm39) I180L probably benign Het
Vmn2r51 A T 7: 9,832,247 (GRCm39) N446K probably damaging Het
Vmn2r63 A T 7: 42,553,402 (GRCm39) I618N probably damaging Het
Wrn T C 8: 33,812,371 (GRCm39) N182S probably benign Het
Zfp296 G T 7: 19,313,637 (GRCm39) C164F possibly damaging Het
Zfp764l1 A G 7: 126,992,521 (GRCm39) Y30H probably damaging Het
Zmynd8 A G 2: 165,676,871 (GRCm39) V249A possibly damaging Het
Zswim2 A G 2: 83,755,571 (GRCm39) L110P probably damaging Het
Other mutations in Shc3
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00555:Shc3 APN 13 51,615,379 (GRCm39) missense probably damaging 0.98
IGL00914:Shc3 APN 13 51,634,263 (GRCm39) splice site probably benign
IGL01417:Shc3 APN 13 51,585,200 (GRCm39) missense probably benign 0.10
IGL01536:Shc3 APN 13 51,670,595 (GRCm39) missense probably damaging 1.00
Massless UTSW 13 51,597,009 (GRCm39) missense possibly damaging 0.92
Singularity UTSW 13 51,596,856 (GRCm39) splice site probably null
R0499:Shc3 UTSW 13 51,634,264 (GRCm39) splice site probably benign
R0941:Shc3 UTSW 13 51,634,242 (GRCm39) missense probably benign
R1652:Shc3 UTSW 13 51,626,875 (GRCm39) missense probably damaging 0.99
R1739:Shc3 UTSW 13 51,636,952 (GRCm39) missense probably damaging 0.97
R1750:Shc3 UTSW 13 51,603,328 (GRCm39) missense probably damaging 1.00
R1817:Shc3 UTSW 13 51,626,888 (GRCm39) missense possibly damaging 0.93
R1848:Shc3 UTSW 13 51,615,424 (GRCm39) missense probably damaging 1.00
R1991:Shc3 UTSW 13 51,596,872 (GRCm39) missense probably benign 0.01
R2103:Shc3 UTSW 13 51,596,872 (GRCm39) missense probably benign 0.01
R4426:Shc3 UTSW 13 51,634,130 (GRCm39) splice site probably null
R4434:Shc3 UTSW 13 51,603,302 (GRCm39) missense probably benign 0.00
R4823:Shc3 UTSW 13 51,605,606 (GRCm39) missense probably benign
R4998:Shc3 UTSW 13 51,596,856 (GRCm39) splice site probably null
R5153:Shc3 UTSW 13 51,615,413 (GRCm39) missense probably damaging 1.00
R5200:Shc3 UTSW 13 51,670,601 (GRCm39) missense probably damaging 1.00
R5659:Shc3 UTSW 13 51,670,630 (GRCm39) missense probably damaging 1.00
R6035:Shc3 UTSW 13 51,615,468 (GRCm39) missense probably damaging 1.00
R6035:Shc3 UTSW 13 51,615,468 (GRCm39) missense probably damaging 1.00
R6346:Shc3 UTSW 13 51,605,651 (GRCm39) missense possibly damaging 0.93
R6434:Shc3 UTSW 13 51,603,326 (GRCm39) missense probably damaging 1.00
R6457:Shc3 UTSW 13 51,636,915 (GRCm39) splice site probably null
R6580:Shc3 UTSW 13 51,596,809 (GRCm39) missense probably benign
R6597:Shc3 UTSW 13 51,597,009 (GRCm39) missense possibly damaging 0.92
R6906:Shc3 UTSW 13 51,620,595 (GRCm39) missense probably damaging 0.97
R7003:Shc3 UTSW 13 51,620,588 (GRCm39) missense probably benign 0.14
R7104:Shc3 UTSW 13 51,585,241 (GRCm39) missense possibly damaging 0.89
R7420:Shc3 UTSW 13 51,585,271 (GRCm39) missense probably benign 0.02
R7476:Shc3 UTSW 13 51,602,042 (GRCm39) missense probably benign
R8312:Shc3 UTSW 13 51,596,754 (GRCm39) missense probably damaging 1.00
R8774:Shc3 UTSW 13 51,615,475 (GRCm39) missense probably damaging 1.00
R8774-TAIL:Shc3 UTSW 13 51,615,475 (GRCm39) missense probably damaging 1.00
R8850:Shc3 UTSW 13 51,634,248 (GRCm39) missense probably benign 0.04
Z1177:Shc3 UTSW 13 51,596,964 (GRCm39) missense probably benign 0.00
Predicted Primers PCR Primer
(F):5'- TAAGTCTCCAGTCCCTGACAG -3'
(R):5'- TGAAGATGCCCTGAGAAACCAG -3'

Sequencing Primer
(F):5'- GGTACTGTAAACAGAGGAGGC -3'
(R):5'- GGCCCCATGTTGAGCAAAG -3'
Posted On 2016-04-15