Incidental Mutation 'R4951:Vmn2r100'
ID |
382015 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vmn2r100
|
Ensembl Gene |
ENSMUSG00000091859 |
Gene Name |
vomeronasal 2, receptor 100 |
Synonyms |
EG627537 |
MMRRC Submission |
042548-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.093)
|
Stock # |
R4951 (G1)
|
Quality Score |
197 |
Status
|
Validated
|
Chromosome |
17 |
Chromosomal Location |
19725073-19752322 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to C
at 19752300 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Isoleucine to Threonine
at position 781
(I781T)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000156263
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000166081]
[ENSMUST00000231465]
|
AlphaFold |
E9QAZ9 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000166081
AA Change: I844T
PolyPhen 2
Score 0.002 (Sensitivity: 0.99; Specificity: 0.30)
|
SMART Domains |
Protein: ENSMUSP00000128350 Gene: ENSMUSG00000091859 AA Change: I844T
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
20 |
N/A |
INTRINSIC |
Pfam:ANF_receptor
|
83 |
456 |
7.4e-41 |
PFAM |
Pfam:NCD3G
|
510 |
563 |
1.9e-21 |
PFAM |
Pfam:7tm_3
|
594 |
831 |
2.6e-51 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000231465
AA Change: I781T
PolyPhen 2
Score 0.008 (Sensitivity: 0.96; Specificity: 0.76)
|
Meta Mutation Damage Score |
0.0898 |
Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.3%
- 10x: 96.5%
- 20x: 93.1%
|
Validation Efficiency |
98% (94/96) |
Allele List at MGI |
|
Other mutations in this stock |
Total: 84 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Adcy1 |
G |
A |
11: 7,088,336 (GRCm39) |
E452K |
possibly damaging |
Het |
Adcy10 |
T |
C |
1: 165,391,532 (GRCm39) |
L1263P |
probably damaging |
Het |
Adgrg1 |
G |
A |
8: 95,731,874 (GRCm39) |
V179M |
probably damaging |
Het |
Agap1 |
T |
A |
1: 89,537,225 (GRCm39) |
V77E |
probably damaging |
Het |
Ahnak |
A |
T |
19: 8,995,199 (GRCm39) |
K5494N |
probably damaging |
Het |
Arhgap19 |
A |
G |
19: 41,762,545 (GRCm39) |
M437T |
probably benign |
Het |
C2cd4c |
C |
A |
10: 79,448,839 (GRCm39) |
A103S |
possibly damaging |
Het |
Clip1 |
A |
T |
5: 123,768,408 (GRCm39) |
D776E |
probably benign |
Het |
Cntn3 |
C |
T |
6: 102,145,986 (GRCm39) |
V952M |
possibly damaging |
Het |
Col6a6 |
A |
G |
9: 105,644,397 (GRCm39) |
|
probably null |
Het |
Crtac1 |
C |
T |
19: 42,402,570 (GRCm39) |
A13T |
probably benign |
Het |
Ddx50 |
C |
T |
10: 62,469,899 (GRCm39) |
A363T |
probably damaging |
Het |
Dock9 |
A |
G |
14: 121,890,547 (GRCm39) |
V241A |
probably benign |
Het |
Dysf |
T |
C |
6: 84,091,102 (GRCm39) |
|
probably null |
Het |
Enpp3 |
A |
T |
10: 24,674,175 (GRCm39) |
M375K |
probably damaging |
Het |
Fam13c |
G |
A |
10: 70,387,621 (GRCm39) |
|
probably null |
Het |
Ftcd |
C |
T |
10: 76,420,517 (GRCm39) |
A417V |
probably benign |
Het |
Gak |
A |
G |
5: 108,730,584 (GRCm39) |
S941P |
probably benign |
Het |
Ganc |
A |
G |
2: 120,286,528 (GRCm39) |
T786A |
probably benign |
Het |
Gfi1 |
A |
C |
5: 107,868,009 (GRCm39) |
S420A |
probably damaging |
Het |
Ghsr |
A |
T |
3: 27,426,510 (GRCm39) |
T189S |
possibly damaging |
Het |
Glb1l |
C |
T |
1: 75,185,019 (GRCm39) |
G122D |
probably damaging |
Het |
Gm10065 |
C |
T |
13: 21,663,421 (GRCm39) |
S64N |
unknown |
Het |
Gm5087 |
C |
A |
14: 13,158,749 (GRCm38) |
|
noncoding transcript |
Het |
Gm973 |
G |
A |
1: 59,580,633 (GRCm39) |
|
probably null |
Het |
Gm9930 |
A |
T |
10: 9,410,449 (GRCm39) |
|
noncoding transcript |
Het |
H6pd |
A |
T |
4: 150,066,044 (GRCm39) |
Y781N |
probably damaging |
Het |
Ide |
G |
A |
19: 37,262,631 (GRCm39) |
L695F |
unknown |
Het |
Il17re |
T |
A |
6: 113,445,868 (GRCm39) |
V393E |
probably damaging |
Het |
Lipo3 |
A |
G |
19: 33,759,621 (GRCm39) |
V205A |
probably benign |
Het |
Lipo5 |
C |
T |
19: 33,446,251 (GRCm39) |
E49K |
probably damaging |
Het |
Lonp1 |
A |
T |
17: 56,927,335 (GRCm39) |
M306K |
possibly damaging |
Het |
Lrig1 |
A |
G |
6: 94,640,959 (GRCm39) |
L82P |
probably damaging |
Het |
Lrp2 |
A |
T |
2: 69,366,332 (GRCm39) |
C256S |
probably damaging |
Het |
Map1b |
A |
T |
13: 99,568,935 (GRCm39) |
I1262K |
unknown |
Het |
Mctp1 |
C |
T |
13: 76,975,894 (GRCm39) |
P756S |
probably damaging |
Het |
Mdn1 |
T |
A |
4: 32,707,459 (GRCm39) |
W1583R |
probably damaging |
Het |
Mis12 |
T |
A |
11: 70,916,473 (GRCm39) |
Y169N |
probably benign |
Het |
Mplkipl1 |
C |
T |
19: 61,164,364 (GRCm39) |
G24R |
unknown |
Het |
Msh5 |
G |
A |
17: 35,257,396 (GRCm39) |
Q333* |
probably null |
Het |
Necap2 |
A |
T |
4: 140,799,834 (GRCm39) |
|
probably null |
Het |
Nfatc2 |
T |
C |
2: 168,412,992 (GRCm39) |
D211G |
probably damaging |
Het |
Nlrx1 |
A |
G |
9: 44,164,726 (GRCm39) |
V906A |
possibly damaging |
Het |
Or2ak7 |
G |
A |
11: 58,575,589 (GRCm39) |
V297I |
probably damaging |
Het |
Or4a2 |
T |
A |
2: 89,248,116 (GRCm39) |
I214F |
probably benign |
Het |
Or4l1 |
A |
T |
14: 50,166,515 (GRCm39) |
L162* |
probably null |
Het |
Or5b125-ps1 |
A |
T |
19: 13,056,620 (GRCm39) |
|
noncoding transcript |
Het |
Or8g24 |
A |
G |
9: 38,989,555 (GRCm39) |
F162S |
probably benign |
Het |
Pate5 |
A |
G |
9: 35,750,732 (GRCm39) |
V30A |
probably damaging |
Het |
Pkhd1l1 |
T |
A |
15: 44,397,287 (GRCm39) |
N2057K |
possibly damaging |
Het |
Ppip5k2 |
T |
C |
1: 97,639,474 (GRCm39) |
K1078R |
possibly damaging |
Het |
Prdm11 |
A |
G |
2: 92,810,954 (GRCm39) |
I215T |
probably damaging |
Het |
Ptpn13 |
C |
T |
5: 103,735,912 (GRCm39) |
P2137L |
probably benign |
Het |
Rif1 |
T |
A |
2: 51,974,998 (GRCm39) |
|
probably null |
Het |
Rnf17 |
T |
C |
14: 56,759,848 (GRCm39) |
V1551A |
probably benign |
Het |
Ror2 |
C |
T |
13: 53,271,183 (GRCm39) |
V391I |
probably benign |
Het |
Rps6ka2 |
A |
T |
17: 7,560,188 (GRCm39) |
D542V |
probably damaging |
Het |
Sema4g |
A |
G |
19: 44,985,010 (GRCm39) |
|
probably null |
Het |
Serpinb6d |
T |
G |
13: 33,850,366 (GRCm39) |
S64R |
probably benign |
Het |
Serpine1 |
C |
T |
5: 137,098,205 (GRCm39) |
R156K |
probably benign |
Het |
Setdb2 |
A |
G |
14: 59,639,752 (GRCm39) |
I713T |
possibly damaging |
Het |
Slamf7 |
A |
G |
1: 171,466,693 (GRCm39) |
F171L |
probably benign |
Het |
Slc15a5 |
A |
G |
6: 138,050,064 (GRCm39) |
L117S |
probably damaging |
Het |
Slc8a3 |
T |
A |
12: 81,361,473 (GRCm39) |
T449S |
probably benign |
Het |
Slc8a3 |
T |
A |
12: 81,362,760 (GRCm39) |
T20S |
probably damaging |
Het |
Smc2 |
G |
A |
4: 52,462,926 (GRCm39) |
V639M |
possibly damaging |
Het |
Sra1 |
A |
T |
18: 36,809,494 (GRCm39) |
C223* |
probably null |
Het |
Srgap1 |
A |
T |
10: 121,621,457 (GRCm39) |
M1012K |
probably benign |
Het |
Stk-ps2 |
A |
T |
1: 46,068,602 (GRCm39) |
|
noncoding transcript |
Het |
Taar6 |
A |
T |
10: 23,861,106 (GRCm39) |
S147T |
probably benign |
Het |
Taf15 |
G |
A |
11: 83,375,637 (GRCm39) |
G34D |
possibly damaging |
Het |
Tarbp1 |
T |
C |
8: 127,174,184 (GRCm39) |
E874G |
possibly damaging |
Het |
Tob2 |
T |
C |
15: 81,735,924 (GRCm39) |
Y15C |
probably damaging |
Het |
Trim12a |
A |
G |
7: 103,953,565 (GRCm39) |
V182A |
possibly damaging |
Het |
Trim67 |
A |
G |
8: 125,521,406 (GRCm39) |
E256G |
probably benign |
Het |
Trrap |
T |
A |
5: 144,742,530 (GRCm39) |
S1382T |
possibly damaging |
Het |
Ttc39d |
T |
A |
17: 80,523,462 (GRCm39) |
S40R |
probably benign |
Het |
Ttn |
A |
T |
2: 76,779,406 (GRCm39) |
V1158E |
probably benign |
Het |
Vmn1r19 |
C |
T |
6: 57,381,927 (GRCm39) |
T160I |
probably benign |
Het |
Vmn2r85 |
T |
C |
10: 130,261,113 (GRCm39) |
E408G |
probably damaging |
Het |
Vwde |
T |
C |
6: 13,187,138 (GRCm39) |
D783G |
probably damaging |
Het |
Wdr27 |
A |
T |
17: 15,096,395 (GRCm39) |
D796E |
probably damaging |
Het |
Zfp365 |
C |
T |
10: 67,725,821 (GRCm39) |
|
probably null |
Het |
Zfp9 |
T |
G |
6: 118,441,408 (GRCm39) |
H418P |
probably damaging |
Het |
|
Other mutations in Vmn2r100 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00904:Vmn2r100
|
APN |
17 |
19,746,262 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00912:Vmn2r100
|
APN |
17 |
19,751,654 (GRCm39) |
missense |
possibly damaging |
0.95 |
IGL01107:Vmn2r100
|
APN |
17 |
19,741,618 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01517:Vmn2r100
|
APN |
17 |
19,742,225 (GRCm39) |
missense |
probably benign |
0.37 |
IGL01594:Vmn2r100
|
APN |
17 |
19,751,495 (GRCm39) |
missense |
possibly damaging |
0.52 |
IGL01657:Vmn2r100
|
APN |
17 |
19,746,178 (GRCm39) |
missense |
possibly damaging |
0.89 |
IGL01822:Vmn2r100
|
APN |
17 |
19,725,100 (GRCm39) |
missense |
probably null |
0.00 |
IGL02020:Vmn2r100
|
APN |
17 |
19,725,200 (GRCm39) |
missense |
possibly damaging |
0.78 |
IGL02060:Vmn2r100
|
APN |
17 |
19,741,516 (GRCm39) |
missense |
possibly damaging |
0.79 |
IGL02126:Vmn2r100
|
APN |
17 |
19,741,504 (GRCm39) |
splice site |
probably benign |
|
IGL02142:Vmn2r100
|
APN |
17 |
19,742,583 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02308:Vmn2r100
|
APN |
17 |
19,741,597 (GRCm39) |
missense |
possibly damaging |
0.90 |
IGL02407:Vmn2r100
|
APN |
17 |
19,741,770 (GRCm39) |
missense |
probably damaging |
0.98 |
IGL02469:Vmn2r100
|
APN |
17 |
19,751,547 (GRCm39) |
nonsense |
probably null |
|
IGL03088:Vmn2r100
|
APN |
17 |
19,742,301 (GRCm39) |
missense |
probably benign |
0.27 |
IGL03181:Vmn2r100
|
APN |
17 |
19,752,207 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03405:Vmn2r100
|
APN |
17 |
19,752,186 (GRCm39) |
missense |
probably damaging |
1.00 |
H8562:Vmn2r100
|
UTSW |
17 |
19,741,752 (GRCm39) |
missense |
possibly damaging |
0.87 |
R0012:Vmn2r100
|
UTSW |
17 |
19,746,296 (GRCm39) |
missense |
probably damaging |
0.99 |
R0012:Vmn2r100
|
UTSW |
17 |
19,725,136 (GRCm39) |
missense |
probably benign |
|
R0044:Vmn2r100
|
UTSW |
17 |
19,742,441 (GRCm39) |
missense |
possibly damaging |
0.46 |
R0109:Vmn2r100
|
UTSW |
17 |
19,742,382 (GRCm39) |
missense |
possibly damaging |
0.80 |
R0111:Vmn2r100
|
UTSW |
17 |
19,742,382 (GRCm39) |
missense |
possibly damaging |
0.80 |
R0112:Vmn2r100
|
UTSW |
17 |
19,742,382 (GRCm39) |
missense |
possibly damaging |
0.80 |
R0149:Vmn2r100
|
UTSW |
17 |
19,741,509 (GRCm39) |
critical splice acceptor site |
probably null |
|
R0355:Vmn2r100
|
UTSW |
17 |
19,751,582 (GRCm39) |
missense |
probably benign |
0.00 |
R0395:Vmn2r100
|
UTSW |
17 |
19,742,382 (GRCm39) |
missense |
possibly damaging |
0.80 |
R0396:Vmn2r100
|
UTSW |
17 |
19,742,382 (GRCm39) |
missense |
possibly damaging |
0.80 |
R0453:Vmn2r100
|
UTSW |
17 |
19,742,382 (GRCm39) |
missense |
possibly damaging |
0.80 |
R0465:Vmn2r100
|
UTSW |
17 |
19,751,792 (GRCm39) |
missense |
probably damaging |
0.98 |
R0477:Vmn2r100
|
UTSW |
17 |
19,742,776 (GRCm39) |
missense |
probably benign |
0.00 |
R0510:Vmn2r100
|
UTSW |
17 |
19,742,382 (GRCm39) |
missense |
possibly damaging |
0.80 |
R0512:Vmn2r100
|
UTSW |
17 |
19,742,382 (GRCm39) |
missense |
possibly damaging |
0.80 |
R0514:Vmn2r100
|
UTSW |
17 |
19,742,382 (GRCm39) |
missense |
possibly damaging |
0.80 |
R0518:Vmn2r100
|
UTSW |
17 |
19,742,178 (GRCm39) |
missense |
probably damaging |
1.00 |
R0521:Vmn2r100
|
UTSW |
17 |
19,742,178 (GRCm39) |
missense |
probably damaging |
1.00 |
R0555:Vmn2r100
|
UTSW |
17 |
19,742,382 (GRCm39) |
missense |
possibly damaging |
0.80 |
R0608:Vmn2r100
|
UTSW |
17 |
19,742,382 (GRCm39) |
missense |
possibly damaging |
0.80 |
R0959:Vmn2r100
|
UTSW |
17 |
19,743,786 (GRCm39) |
missense |
possibly damaging |
0.95 |
R1114:Vmn2r100
|
UTSW |
17 |
19,752,261 (GRCm39) |
missense |
probably damaging |
1.00 |
R2027:Vmn2r100
|
UTSW |
17 |
19,742,334 (GRCm39) |
missense |
probably benign |
0.02 |
R2049:Vmn2r100
|
UTSW |
17 |
19,742,312 (GRCm39) |
missense |
probably benign |
0.00 |
R2224:Vmn2r100
|
UTSW |
17 |
19,742,634 (GRCm39) |
missense |
probably benign |
0.03 |
R2226:Vmn2r100
|
UTSW |
17 |
19,742,634 (GRCm39) |
missense |
probably benign |
0.03 |
R3618:Vmn2r100
|
UTSW |
17 |
19,743,692 (GRCm39) |
missense |
probably benign |
|
R3715:Vmn2r100
|
UTSW |
17 |
19,752,272 (GRCm39) |
missense |
probably damaging |
0.99 |
R4120:Vmn2r100
|
UTSW |
17 |
19,752,215 (GRCm39) |
missense |
probably damaging |
1.00 |
R4152:Vmn2r100
|
UTSW |
17 |
19,743,681 (GRCm39) |
frame shift |
probably null |
|
R4153:Vmn2r100
|
UTSW |
17 |
19,743,681 (GRCm39) |
frame shift |
probably null |
|
R4154:Vmn2r100
|
UTSW |
17 |
19,743,681 (GRCm39) |
frame shift |
probably null |
|
R4200:Vmn2r100
|
UTSW |
17 |
19,742,797 (GRCm39) |
missense |
probably benign |
0.29 |
R4632:Vmn2r100
|
UTSW |
17 |
19,752,216 (GRCm39) |
missense |
probably damaging |
1.00 |
R4720:Vmn2r100
|
UTSW |
17 |
19,742,788 (GRCm39) |
missense |
probably benign |
0.02 |
R4761:Vmn2r100
|
UTSW |
17 |
19,741,630 (GRCm39) |
missense |
possibly damaging |
0.47 |
R4831:Vmn2r100
|
UTSW |
17 |
19,741,672 (GRCm39) |
missense |
probably benign |
0.28 |
R5211:Vmn2r100
|
UTSW |
17 |
19,746,257 (GRCm39) |
missense |
possibly damaging |
0.67 |
R5553:Vmn2r100
|
UTSW |
17 |
19,725,110 (GRCm39) |
missense |
possibly damaging |
0.64 |
R5657:Vmn2r100
|
UTSW |
17 |
19,725,178 (GRCm39) |
missense |
probably benign |
0.31 |
R5883:Vmn2r100
|
UTSW |
17 |
19,743,786 (GRCm39) |
missense |
probably benign |
|
R5912:Vmn2r100
|
UTSW |
17 |
19,752,071 (GRCm39) |
missense |
probably damaging |
0.99 |
R6141:Vmn2r100
|
UTSW |
17 |
19,742,576 (GRCm39) |
missense |
probably benign |
0.07 |
R6146:Vmn2r100
|
UTSW |
17 |
19,742,522 (GRCm39) |
missense |
probably benign |
0.04 |
R6500:Vmn2r100
|
UTSW |
17 |
19,742,355 (GRCm39) |
missense |
probably damaging |
1.00 |
R6575:Vmn2r100
|
UTSW |
17 |
19,741,671 (GRCm39) |
missense |
probably benign |
0.12 |
R6647:Vmn2r100
|
UTSW |
17 |
19,742,785 (GRCm39) |
missense |
probably benign |
0.00 |
R7038:Vmn2r100
|
UTSW |
17 |
19,725,263 (GRCm39) |
missense |
possibly damaging |
0.76 |
R7052:Vmn2r100
|
UTSW |
17 |
19,751,556 (GRCm39) |
missense |
possibly damaging |
0.95 |
R7170:Vmn2r100
|
UTSW |
17 |
19,752,233 (GRCm39) |
missense |
probably benign |
0.00 |
R7209:Vmn2r100
|
UTSW |
17 |
19,751,576 (GRCm39) |
missense |
not run |
|
R7312:Vmn2r100
|
UTSW |
17 |
19,742,296 (GRCm39) |
missense |
probably benign |
0.01 |
R7734:Vmn2r100
|
UTSW |
17 |
19,742,296 (GRCm39) |
missense |
probably benign |
0.01 |
R7750:Vmn2r100
|
UTSW |
17 |
19,742,726 (GRCm39) |
missense |
probably benign |
|
R8103:Vmn2r100
|
UTSW |
17 |
19,751,415 (GRCm39) |
splice site |
probably null |
|
R8193:Vmn2r100
|
UTSW |
17 |
19,725,102 (GRCm39) |
nonsense |
probably null |
|
R8267:Vmn2r100
|
UTSW |
17 |
19,742,752 (GRCm39) |
nonsense |
probably null |
|
R8290:Vmn2r100
|
UTSW |
17 |
19,751,612 (GRCm39) |
missense |
probably damaging |
0.99 |
R8531:Vmn2r100
|
UTSW |
17 |
19,742,459 (GRCm39) |
missense |
possibly damaging |
0.66 |
R8786:Vmn2r100
|
UTSW |
17 |
19,742,838 (GRCm39) |
missense |
probably damaging |
1.00 |
R8920:Vmn2r100
|
UTSW |
17 |
19,741,620 (GRCm39) |
missense |
probably damaging |
1.00 |
R8938:Vmn2r100
|
UTSW |
17 |
19,751,825 (GRCm39) |
missense |
probably benign |
0.00 |
R9555:Vmn2r100
|
UTSW |
17 |
19,743,857 (GRCm39) |
missense |
probably benign |
0.00 |
R9572:Vmn2r100
|
UTSW |
17 |
19,741,513 (GRCm39) |
missense |
probably benign |
0.00 |
R9609:Vmn2r100
|
UTSW |
17 |
19,743,732 (GRCm39) |
missense |
probably damaging |
1.00 |
R9618:Vmn2r100
|
UTSW |
17 |
19,742,583 (GRCm39) |
missense |
probably damaging |
1.00 |
X0062:Vmn2r100
|
UTSW |
17 |
19,751,652 (GRCm39) |
missense |
possibly damaging |
0.89 |
Z1176:Vmn2r100
|
UTSW |
17 |
19,741,792 (GRCm39) |
missense |
probably benign |
0.00 |
Z1177:Vmn2r100
|
UTSW |
17 |
19,725,251 (GRCm39) |
missense |
probably benign |
0.00 |
|
Predicted Primers |
PCR Primer
(F):5'- CCCTTGGGAGTTATACTATGGCC -3'
(R):5'- TGTGTGCATCAGAGATGGCC -3'
Sequencing Primer
(F):5'- GTCGAGAAATTTGCCTGATACATTC -3'
(R):5'- GATGAATGACTCCTTTTATGAAG -3'
|
Posted On |
2016-04-27 |