Incidental Mutation 'R4939:Jmjd1c'
ID |
382931 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Jmjd1c
|
Ensembl Gene |
ENSMUSG00000037876 |
Gene Name |
jumonji domain containing 1C |
Synonyms |
D630035I23Rik, TRIP8, 5430433L24Rik |
MMRRC Submission |
042538-MU
|
Accession Numbers |
|
Essential gene? |
Possibly essential
(E-score: 0.662)
|
Stock # |
R4939 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
10 |
Chromosomal Location |
66932189-67092105 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to A
at 67081916 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Asparagine to Lysine
at position 2346
(N2346K)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000134551
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000051446]
[ENSMUST00000173689]
[ENSMUST00000174408]
|
AlphaFold |
Q69ZK6 |
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000051446
AA Change: N2345K
PolyPhen 2
Score 0.819 (Sensitivity: 0.84; Specificity: 0.93)
|
SMART Domains |
Protein: ENSMUSP00000056227 Gene: ENSMUSG00000037876 AA Change: N2345K
Domain | Start | End | E-Value | Type |
Blast:JmjC
|
143 |
2236 |
N/A |
BLAST |
JmjC
|
2264 |
2488 |
3.29e-53 |
SMART |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000173236
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000173689
AA Change: N2165K
PolyPhen 2
Score 0.819 (Sensitivity: 0.84; Specificity: 0.93)
|
SMART Domains |
Protein: ENSMUSP00000133700 Gene: ENSMUSG00000037876 AA Change: N2165K
Domain | Start | End | E-Value | Type |
Blast:JmjC
|
1 |
2056 |
N/A |
BLAST |
JmjC
|
2084 |
2308 |
3.29e-53 |
SMART |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000173762
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000174408
AA Change: N2346K
PolyPhen 2
Score 0.928 (Sensitivity: 0.81; Specificity: 0.94)
|
SMART Domains |
Protein: ENSMUSP00000134551 Gene: ENSMUSG00000037876 AA Change: N2346K
Domain | Start | End | E-Value | Type |
Blast:JmjC
|
143 |
2237 |
N/A |
BLAST |
JmjC
|
2265 |
2489 |
3.29e-53 |
SMART |
|
Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.4%
- 10x: 96.6%
- 20x: 93.4%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene interacts with thyroid hormone receptors and contains a jumonji domain. It is a candidate histone demethylase and is thought to be a coactivator for key transcription factors. It plays a role in the DNA-damage response pathway by demethylating the mediator of DNA damage checkpoint 1 (MDC1) protein, and is required for the survival of acute myeloid leukemia. Mutations in this gene are associated with Rett syndrome and intellectual disability. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2015] PHENOTYPE: Mice homozygous for a null allele exhibit an age-dependent male infertility phenotype, characterized by early loss of undifferentiated spermatogonia, and a progressive reduction in testis size/weight and male germ cells, partly due to increased male germ cell apoptosis. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 85 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Adamtsl1 |
A |
T |
4: 86,161,962 (GRCm39) |
Y365F |
possibly damaging |
Het |
Atp2a1 |
T |
C |
7: 126,049,288 (GRCm39) |
M585V |
probably benign |
Het |
Brca1 |
A |
G |
11: 101,398,876 (GRCm39) |
V1572A |
probably benign |
Het |
C1ql4 |
A |
T |
15: 98,985,521 (GRCm39) |
M30K |
probably damaging |
Het |
Ccdc73 |
A |
G |
2: 104,822,502 (GRCm39) |
|
probably null |
Het |
Cdk6 |
A |
T |
5: 3,394,377 (GRCm39) |
D4V |
probably null |
Het |
Celf3 |
ACAGCAGCAGCAGCAGCAGCAGCA |
ACAGCAGCAGCAGCAGCAGCA |
3: 94,395,537 (GRCm39) |
|
probably benign |
Het |
Clic4 |
T |
C |
4: 134,950,852 (GRCm39) |
E113G |
probably benign |
Het |
Creld1 |
C |
A |
6: 113,465,140 (GRCm39) |
H122Q |
probably benign |
Het |
Cyp4a29 |
G |
A |
4: 115,104,873 (GRCm39) |
|
probably null |
Het |
Dnaaf3 |
A |
T |
7: 4,530,144 (GRCm39) |
S246R |
probably damaging |
Het |
Dnah12 |
A |
T |
14: 26,613,481 (GRCm39) |
T3925S |
probably damaging |
Het |
Dnajc21 |
T |
A |
15: 10,449,683 (GRCm39) |
D446V |
probably damaging |
Het |
Dock8 |
A |
T |
19: 25,099,764 (GRCm39) |
Y629F |
probably damaging |
Het |
Duxf4 |
T |
C |
10: 58,071,425 (GRCm39) |
N263S |
probably benign |
Het |
E2f8 |
A |
T |
7: 48,521,886 (GRCm39) |
N405K |
probably benign |
Het |
Flg |
A |
G |
3: 93,187,154 (GRCm39) |
N202S |
probably benign |
Het |
Glyatl3 |
A |
G |
17: 41,220,914 (GRCm39) |
|
probably null |
Het |
Gm38999 |
A |
G |
7: 43,077,885 (GRCm39) |
T63A |
possibly damaging |
Het |
Grap |
A |
G |
11: 61,551,124 (GRCm39) |
Y52C |
probably damaging |
Het |
Haus2 |
T |
A |
2: 120,449,517 (GRCm39) |
I187K |
probably damaging |
Het |
Heatr5b |
T |
C |
17: 79,069,689 (GRCm39) |
E1686G |
probably benign |
Het |
Herc2 |
A |
G |
7: 55,856,484 (GRCm39) |
D3944G |
probably damaging |
Het |
Hexd |
A |
T |
11: 121,098,542 (GRCm39) |
M9L |
probably benign |
Het |
Hoxa3 |
T |
C |
6: 52,147,656 (GRCm39) |
|
probably benign |
Het |
Hspg2 |
A |
T |
4: 137,235,342 (GRCm39) |
I126F |
probably damaging |
Het |
Itpr1 |
T |
A |
6: 108,417,519 (GRCm39) |
C123* |
probably null |
Het |
Kctd9 |
A |
G |
14: 67,967,135 (GRCm39) |
Y37C |
probably damaging |
Het |
Kmt5b |
A |
C |
19: 3,865,245 (GRCm39) |
S747R |
possibly damaging |
Het |
Krt26 |
T |
C |
11: 99,225,522 (GRCm39) |
M320V |
probably benign |
Het |
Lama1 |
T |
G |
17: 68,044,470 (GRCm39) |
V123G |
possibly damaging |
Het |
Lamc2 |
T |
C |
1: 153,002,582 (GRCm39) |
D1103G |
probably damaging |
Het |
Lepr |
A |
T |
4: 101,590,635 (GRCm39) |
K71I |
possibly damaging |
Het |
Llgl1 |
A |
T |
11: 60,600,805 (GRCm39) |
|
probably null |
Het |
Mcoln2 |
A |
T |
3: 145,897,996 (GRCm39) |
H39L |
probably benign |
Het |
Mtrex |
T |
C |
13: 113,046,426 (GRCm39) |
D308G |
possibly damaging |
Het |
Myh11 |
T |
A |
16: 14,057,371 (GRCm39) |
T315S |
probably benign |
Het |
Ncapd3 |
T |
C |
9: 26,975,165 (GRCm39) |
|
probably null |
Het |
Nlrp9b |
G |
T |
7: 19,758,421 (GRCm39) |
V553F |
probably damaging |
Het |
Nubpl |
A |
G |
12: 52,227,878 (GRCm39) |
N129S |
probably damaging |
Het |
Nup214 |
C |
A |
2: 31,873,171 (GRCm39) |
T255K |
probably benign |
Het |
Or10j3 |
T |
C |
1: 173,031,030 (GRCm39) |
Y36H |
possibly damaging |
Het |
Or2t46 |
G |
T |
11: 58,472,037 (GRCm39) |
M122I |
probably damaging |
Het |
Or2y17 |
A |
G |
11: 49,231,376 (GRCm39) |
T6A |
probably benign |
Het |
Or4d1 |
G |
T |
11: 87,804,950 (GRCm39) |
P261T |
probably damaging |
Het |
Or52z14 |
T |
C |
7: 103,253,458 (GRCm39) |
V199A |
probably benign |
Het |
Or5b3 |
T |
A |
19: 13,388,219 (GRCm39) |
N95K |
probably benign |
Het |
Orc3 |
G |
A |
4: 34,593,126 (GRCm39) |
Q256* |
probably null |
Het |
Pbrm1 |
A |
G |
14: 30,783,580 (GRCm39) |
M566V |
probably damaging |
Het |
Pde6b |
A |
G |
5: 108,569,363 (GRCm39) |
I357V |
probably benign |
Het |
Pkdrej |
A |
G |
15: 85,704,484 (GRCm39) |
I484T |
possibly damaging |
Het |
Plvap |
A |
G |
8: 71,964,083 (GRCm39) |
V93A |
probably benign |
Het |
Plxna4 |
T |
C |
6: 32,142,697 (GRCm39) |
Y1586C |
probably damaging |
Het |
Ppfia4 |
A |
T |
1: 134,255,817 (GRCm39) |
L196Q |
possibly damaging |
Het |
Ptpn13 |
T |
G |
5: 103,665,335 (GRCm39) |
|
probably null |
Het |
Ranbp17 |
T |
C |
11: 33,169,223 (GRCm39) |
N997S |
probably benign |
Het |
Rpap2 |
G |
T |
5: 107,751,491 (GRCm39) |
|
probably null |
Het |
Rrm1 |
T |
C |
7: 102,116,131 (GRCm39) |
V683A |
probably benign |
Het |
Ruvbl1 |
A |
G |
6: 88,460,021 (GRCm39) |
|
probably null |
Het |
Sh3pxd2a |
A |
G |
19: 47,266,843 (GRCm39) |
Y277H |
probably damaging |
Het |
Shank1 |
C |
T |
7: 43,975,586 (GRCm39) |
P477S |
unknown |
Het |
Shtn1 |
T |
C |
19: 59,010,633 (GRCm39) |
E278G |
probably benign |
Het |
Skap2 |
T |
A |
6: 51,899,303 (GRCm39) |
I109F |
possibly damaging |
Het |
Slc28a3 |
A |
C |
13: 58,706,395 (GRCm39) |
I615M |
probably benign |
Het |
Slc4a11 |
A |
G |
2: 130,526,788 (GRCm39) |
L780P |
probably damaging |
Het |
Slc5a4b |
T |
C |
10: 75,917,301 (GRCm39) |
E245G |
probably benign |
Het |
Slfn8 |
C |
T |
11: 82,894,111 (GRCm39) |
A843T |
probably benign |
Het |
Sncaip |
A |
T |
18: 53,040,335 (GRCm39) |
Q843L |
possibly damaging |
Het |
Spidr |
T |
A |
16: 15,958,610 (GRCm39) |
K51* |
probably null |
Het |
Spopfm2 |
A |
T |
3: 94,083,540 (GRCm39) |
Y90* |
probably null |
Het |
Tas2r123 |
T |
C |
6: 132,824,808 (GRCm39) |
V235A |
probably benign |
Het |
Tgfbr3 |
T |
C |
5: 107,278,335 (GRCm39) |
D757G |
probably benign |
Het |
Tmem132d |
A |
T |
5: 127,873,139 (GRCm39) |
V490D |
probably damaging |
Het |
Top2a |
T |
A |
11: 98,900,918 (GRCm39) |
H557L |
probably damaging |
Het |
Trafd1 |
A |
G |
5: 121,513,254 (GRCm39) |
I328T |
probably benign |
Het |
Trappc11 |
G |
A |
8: 47,972,700 (GRCm39) |
A291V |
probably damaging |
Het |
Tuba1c |
A |
G |
15: 98,935,835 (GRCm39) |
Y432C |
probably damaging |
Het |
Utp11 |
T |
G |
4: 124,577,043 (GRCm39) |
R109S |
possibly damaging |
Het |
Vmn1r159 |
T |
G |
7: 22,542,316 (GRCm39) |
T239P |
probably damaging |
Het |
Vwce |
A |
T |
19: 10,622,414 (GRCm39) |
N239Y |
probably damaging |
Het |
Yes1 |
T |
C |
5: 32,802,457 (GRCm39) |
|
probably null |
Het |
Zfand6 |
A |
C |
7: 84,265,030 (GRCm39) |
*224G |
probably null |
Het |
Zfp408 |
A |
T |
2: 91,475,450 (GRCm39) |
I668N |
probably damaging |
Het |
Zfp647 |
TGCACG |
TGCACGCACG |
15: 76,795,244 (GRCm39) |
|
probably null |
Het |
Zfp946 |
T |
C |
17: 22,674,418 (GRCm39) |
F391L |
probably damaging |
Het |
|
Other mutations in Jmjd1c |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01062:Jmjd1c
|
APN |
10 |
67,062,494 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01604:Jmjd1c
|
APN |
10 |
67,085,541 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01753:Jmjd1c
|
APN |
10 |
67,067,794 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02081:Jmjd1c
|
APN |
10 |
67,055,305 (GRCm39) |
missense |
probably benign |
0.02 |
IGL02128:Jmjd1c
|
APN |
10 |
67,079,648 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02134:Jmjd1c
|
APN |
10 |
67,056,171 (GRCm39) |
missense |
possibly damaging |
0.87 |
IGL02215:Jmjd1c
|
APN |
10 |
67,056,101 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02408:Jmjd1c
|
APN |
10 |
67,062,161 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02502:Jmjd1c
|
APN |
10 |
67,061,640 (GRCm39) |
missense |
probably benign |
0.13 |
IGL02546:Jmjd1c
|
APN |
10 |
67,061,115 (GRCm39) |
missense |
possibly damaging |
0.94 |
IGL02943:Jmjd1c
|
APN |
10 |
67,055,433 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL03171:Jmjd1c
|
APN |
10 |
67,061,277 (GRCm39) |
missense |
possibly damaging |
0.89 |
IGL03261:Jmjd1c
|
APN |
10 |
67,067,849 (GRCm39) |
missense |
probably damaging |
0.99 |
Accordion
|
UTSW |
10 |
67,069,193 (GRCm39) |
missense |
probably damaging |
0.99 |
PIT4378001:Jmjd1c
|
UTSW |
10 |
67,065,692 (GRCm39) |
missense |
probably damaging |
1.00 |
R0126:Jmjd1c
|
UTSW |
10 |
67,055,105 (GRCm39) |
missense |
probably damaging |
0.98 |
R0133:Jmjd1c
|
UTSW |
10 |
67,076,587 (GRCm39) |
missense |
probably benign |
0.22 |
R0201:Jmjd1c
|
UTSW |
10 |
67,054,888 (GRCm39) |
missense |
unknown |
|
R0396:Jmjd1c
|
UTSW |
10 |
67,055,302 (GRCm39) |
missense |
possibly damaging |
0.82 |
R0401:Jmjd1c
|
UTSW |
10 |
67,056,161 (GRCm39) |
missense |
probably damaging |
1.00 |
R0452:Jmjd1c
|
UTSW |
10 |
67,091,261 (GRCm39) |
missense |
probably benign |
0.28 |
R0488:Jmjd1c
|
UTSW |
10 |
67,076,506 (GRCm39) |
missense |
probably damaging |
0.99 |
R0504:Jmjd1c
|
UTSW |
10 |
67,061,534 (GRCm39) |
missense |
probably damaging |
1.00 |
R0555:Jmjd1c
|
UTSW |
10 |
67,061,568 (GRCm39) |
missense |
probably benign |
0.01 |
R0673:Jmjd1c
|
UTSW |
10 |
67,062,588 (GRCm39) |
missense |
probably damaging |
1.00 |
R0718:Jmjd1c
|
UTSW |
10 |
67,054,725 (GRCm39) |
splice site |
probably null |
|
R0755:Jmjd1c
|
UTSW |
10 |
66,932,378 (GRCm39) |
intron |
probably benign |
|
R1142:Jmjd1c
|
UTSW |
10 |
67,061,124 (GRCm39) |
missense |
probably damaging |
1.00 |
R1196:Jmjd1c
|
UTSW |
10 |
67,075,015 (GRCm39) |
splice site |
probably benign |
|
R1413:Jmjd1c
|
UTSW |
10 |
67,085,529 (GRCm39) |
missense |
probably damaging |
1.00 |
R1619:Jmjd1c
|
UTSW |
10 |
67,055,654 (GRCm39) |
missense |
probably benign |
0.25 |
R1676:Jmjd1c
|
UTSW |
10 |
67,060,588 (GRCm39) |
missense |
probably benign |
0.02 |
R1751:Jmjd1c
|
UTSW |
10 |
67,061,469 (GRCm39) |
missense |
probably benign |
|
R1950:Jmjd1c
|
UTSW |
10 |
67,075,701 (GRCm39) |
missense |
possibly damaging |
0.71 |
R1968:Jmjd1c
|
UTSW |
10 |
67,061,219 (GRCm39) |
missense |
probably damaging |
1.00 |
R2049:Jmjd1c
|
UTSW |
10 |
66,993,777 (GRCm39) |
nonsense |
probably null |
|
R2061:Jmjd1c
|
UTSW |
10 |
67,054,205 (GRCm39) |
missense |
probably damaging |
1.00 |
R2202:Jmjd1c
|
UTSW |
10 |
67,075,242 (GRCm39) |
splice site |
probably null |
|
R2203:Jmjd1c
|
UTSW |
10 |
67,075,242 (GRCm39) |
splice site |
probably null |
|
R2256:Jmjd1c
|
UTSW |
10 |
67,061,073 (GRCm39) |
missense |
probably damaging |
1.00 |
R2312:Jmjd1c
|
UTSW |
10 |
67,074,629 (GRCm39) |
missense |
probably damaging |
0.98 |
R2349:Jmjd1c
|
UTSW |
10 |
67,091,279 (GRCm39) |
missense |
probably benign |
|
R2392:Jmjd1c
|
UTSW |
10 |
67,065,683 (GRCm39) |
missense |
probably damaging |
1.00 |
R3015:Jmjd1c
|
UTSW |
10 |
66,993,711 (GRCm39) |
missense |
probably damaging |
1.00 |
R3110:Jmjd1c
|
UTSW |
10 |
67,075,863 (GRCm39) |
splice site |
probably benign |
|
R4043:Jmjd1c
|
UTSW |
10 |
67,055,245 (GRCm39) |
missense |
possibly damaging |
0.55 |
R4097:Jmjd1c
|
UTSW |
10 |
67,054,787 (GRCm39) |
missense |
probably benign |
0.09 |
R4118:Jmjd1c
|
UTSW |
10 |
67,055,532 (GRCm39) |
missense |
probably damaging |
0.96 |
R4193:Jmjd1c
|
UTSW |
10 |
66,932,460 (GRCm39) |
intron |
probably benign |
|
R4352:Jmjd1c
|
UTSW |
10 |
67,080,588 (GRCm39) |
missense |
probably damaging |
1.00 |
R4577:Jmjd1c
|
UTSW |
10 |
67,085,529 (GRCm39) |
missense |
probably damaging |
1.00 |
R4630:Jmjd1c
|
UTSW |
10 |
66,993,753 (GRCm39) |
nonsense |
probably null |
|
R4717:Jmjd1c
|
UTSW |
10 |
66,993,830 (GRCm39) |
nonsense |
probably null |
|
R4741:Jmjd1c
|
UTSW |
10 |
67,060,718 (GRCm39) |
missense |
possibly damaging |
0.56 |
R4774:Jmjd1c
|
UTSW |
10 |
67,060,571 (GRCm39) |
missense |
possibly damaging |
0.45 |
R4836:Jmjd1c
|
UTSW |
10 |
67,069,225 (GRCm39) |
missense |
probably benign |
0.21 |
R4914:Jmjd1c
|
UTSW |
10 |
67,054,750 (GRCm39) |
missense |
probably damaging |
1.00 |
R5211:Jmjd1c
|
UTSW |
10 |
67,067,795 (GRCm39) |
missense |
probably damaging |
1.00 |
R5215:Jmjd1c
|
UTSW |
10 |
67,076,480 (GRCm39) |
missense |
possibly damaging |
0.93 |
R5514:Jmjd1c
|
UTSW |
10 |
67,053,928 (GRCm39) |
missense |
probably damaging |
1.00 |
R5530:Jmjd1c
|
UTSW |
10 |
67,085,541 (GRCm39) |
missense |
probably damaging |
1.00 |
R5624:Jmjd1c
|
UTSW |
10 |
67,069,193 (GRCm39) |
missense |
probably damaging |
0.99 |
R5640:Jmjd1c
|
UTSW |
10 |
67,061,857 (GRCm39) |
missense |
probably benign |
0.10 |
R5654:Jmjd1c
|
UTSW |
10 |
67,065,785 (GRCm39) |
missense |
probably benign |
0.10 |
R5742:Jmjd1c
|
UTSW |
10 |
67,056,112 (GRCm39) |
missense |
probably benign |
0.02 |
R5764:Jmjd1c
|
UTSW |
10 |
67,062,291 (GRCm39) |
missense |
probably damaging |
1.00 |
R6118:Jmjd1c
|
UTSW |
10 |
67,075,791 (GRCm39) |
missense |
probably damaging |
1.00 |
R6163:Jmjd1c
|
UTSW |
10 |
67,083,827 (GRCm39) |
missense |
possibly damaging |
0.46 |
R6256:Jmjd1c
|
UTSW |
10 |
67,056,187 (GRCm39) |
missense |
probably damaging |
1.00 |
R6266:Jmjd1c
|
UTSW |
10 |
67,085,439 (GRCm39) |
missense |
probably damaging |
0.96 |
R6358:Jmjd1c
|
UTSW |
10 |
67,061,718 (GRCm39) |
missense |
probably benign |
|
R6430:Jmjd1c
|
UTSW |
10 |
67,059,939 (GRCm39) |
missense |
possibly damaging |
0.87 |
R6455:Jmjd1c
|
UTSW |
10 |
67,061,795 (GRCm39) |
missense |
probably benign |
0.10 |
R6887:Jmjd1c
|
UTSW |
10 |
67,025,599 (GRCm39) |
missense |
possibly damaging |
0.74 |
R6895:Jmjd1c
|
UTSW |
10 |
67,052,869 (GRCm39) |
missense |
probably benign |
0.00 |
R7041:Jmjd1c
|
UTSW |
10 |
67,056,388 (GRCm39) |
missense |
possibly damaging |
0.90 |
R7095:Jmjd1c
|
UTSW |
10 |
67,055,411 (GRCm39) |
missense |
probably benign |
0.39 |
R7113:Jmjd1c
|
UTSW |
10 |
66,993,780 (GRCm39) |
missense |
probably damaging |
0.98 |
R7225:Jmjd1c
|
UTSW |
10 |
67,061,844 (GRCm39) |
missense |
probably benign |
0.00 |
R7249:Jmjd1c
|
UTSW |
10 |
67,025,596 (GRCm39) |
missense |
probably benign |
0.01 |
R7361:Jmjd1c
|
UTSW |
10 |
67,054,143 (GRCm39) |
missense |
probably benign |
0.10 |
R7383:Jmjd1c
|
UTSW |
10 |
67,025,537 (GRCm39) |
missense |
probably benign |
0.14 |
R7460:Jmjd1c
|
UTSW |
10 |
67,052,815 (GRCm39) |
missense |
probably benign |
0.24 |
R7475:Jmjd1c
|
UTSW |
10 |
67,061,092 (GRCm39) |
missense |
probably benign |
0.22 |
R7502:Jmjd1c
|
UTSW |
10 |
67,067,794 (GRCm39) |
missense |
probably damaging |
0.99 |
R7699:Jmjd1c
|
UTSW |
10 |
67,054,195 (GRCm39) |
missense |
probably benign |
0.10 |
R7745:Jmjd1c
|
UTSW |
10 |
67,052,824 (GRCm39) |
missense |
probably damaging |
0.96 |
R7897:Jmjd1c
|
UTSW |
10 |
67,075,644 (GRCm39) |
missense |
probably damaging |
0.96 |
R7908:Jmjd1c
|
UTSW |
10 |
67,061,621 (GRCm39) |
missense |
probably benign |
|
R7911:Jmjd1c
|
UTSW |
10 |
67,067,774 (GRCm39) |
missense |
probably damaging |
1.00 |
R7967:Jmjd1c
|
UTSW |
10 |
67,085,461 (GRCm39) |
missense |
probably damaging |
1.00 |
R8058:Jmjd1c
|
UTSW |
10 |
67,090,274 (GRCm39) |
missense |
not run |
|
R8224:Jmjd1c
|
UTSW |
10 |
67,080,628 (GRCm39) |
missense |
noncoding transcript |
|
R8251:Jmjd1c
|
UTSW |
10 |
67,075,068 (GRCm39) |
missense |
noncoding transcript |
|
R8797:Jmjd1c
|
UTSW |
10 |
67,060,616 (GRCm39) |
missense |
probably benign |
|
R8833:Jmjd1c
|
UTSW |
10 |
67,054,162 (GRCm39) |
missense |
probably benign |
0.03 |
R9262:Jmjd1c
|
UTSW |
10 |
67,083,793 (GRCm39) |
missense |
probably benign |
0.39 |
R9354:Jmjd1c
|
UTSW |
10 |
67,059,875 (GRCm39) |
missense |
probably damaging |
0.99 |
R9373:Jmjd1c
|
UTSW |
10 |
66,932,495 (GRCm39) |
intron |
probably benign |
|
R9477:Jmjd1c
|
UTSW |
10 |
66,993,734 (GRCm39) |
nonsense |
probably null |
|
R9519:Jmjd1c
|
UTSW |
10 |
66,993,798 (GRCm39) |
missense |
possibly damaging |
0.80 |
R9701:Jmjd1c
|
UTSW |
10 |
67,060,745 (GRCm39) |
missense |
possibly damaging |
0.94 |
R9802:Jmjd1c
|
UTSW |
10 |
67,060,745 (GRCm39) |
missense |
possibly damaging |
0.94 |
RF011:Jmjd1c
|
UTSW |
10 |
67,055,978 (GRCm39) |
missense |
possibly damaging |
0.47 |
Z1088:Jmjd1c
|
UTSW |
10 |
67,073,953 (GRCm39) |
missense |
probably benign |
|
Z1176:Jmjd1c
|
UTSW |
10 |
67,073,953 (GRCm39) |
missense |
probably benign |
|
Z1177:Jmjd1c
|
UTSW |
10 |
67,081,904 (GRCm39) |
missense |
probably damaging |
0.98 |
Z1177:Jmjd1c
|
UTSW |
10 |
67,073,953 (GRCm39) |
missense |
probably benign |
|
|
Predicted Primers |
PCR Primer
(F):5'- GTGGGCATAAATCTGTGCATTATC -3'
(R):5'- GCTGGTGCCTATTCAGCATAAC -3'
Sequencing Primer
(F):5'- TTATCAGATGCGCACAGTGC -3'
(R):5'- GGTGCCTATTCAGCATAACAAAATG -3'
|
Posted On |
2016-04-27 |