Mutagenetix > Incidental Mutation

Incidental Mutation 'R0333:Klhl23'

38323

Institutional Source

Beutler Lab

Gene Symbol

Klhl23

Ensembl Gene

ENSMUSG00000042155

Gene Name

kelch-like 23

Synonyms

C130068N17Rik

MMRRC Submission

038542-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.111) question?

Stock #

R0333 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

69652288-69666995 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 69664241 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Tyrosine to Cysteine at position 530 (Y530C)

Ref Sequence

ENSEMBL: ENSMUSP00000050219 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000053087]

AlphaFold

Q6GQU2

Predicted Effect

probably damaging
Transcript: ENSMUST00000053087
AA Change: Y530C

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000050219
Gene: ENSMUSG00000042155
AA Change: Y530C

Domain	Start	End	E-Value	Type
BTB	36	134	8.34e-27	SMART
BACK	139	240	8.51e-23	SMART
Kelch	274	319	5.19e0	SMART
Kelch	321	369	5.85e-10	SMART
Kelch	370	416	7.78e-6	SMART
Kelch	417	466	2.11e-1	SMART
Kelch	467	508	3.8e-9	SMART
Kelch	509	557	2.25e-11	SMART

Meta Mutation Damage Score

0.9634

Coding Region Coverage

1x: 99.2%
3x: 98.4%
10x: 96.7%
20x: 93.8%

Validation Efficiency

100% (53/53)

Allele List at MGI

Other mutations in this stock

Total: 49 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Alas1	T	C	9: 106,118,480 (GRCm39)	N214S	probably benign	Het
Antxr1	A	G	6: 87,165,820 (GRCm39)		probably benign	Het
Atxn7l3	A	T	11: 102,185,818 (GRCm39)		probably null	Het
Cab39l	A	G	14: 59,737,060 (GRCm39)	E60G	probably damaging	Het
Cdc5l	G	T	17: 45,704,142 (GRCm39)		probably benign	Het
Cux2	T	C	5: 121,998,671 (GRCm39)	E1423G	probably benign	Het
Dbndd1	G	T	8: 124,233,512 (GRCm39)	Q165K	probably damaging	Het
Drd1	C	A	13: 54,208,082 (GRCm39)	C37F	probably damaging	Het
Elp3	G	A	14: 65,828,042 (GRCm39)	P11L	probably benign	Het
F830045P16Rik	A	G	2: 129,314,777 (GRCm39)	Y167H	probably damaging	Het
Gimap3	G	A	6: 48,742,664 (GRCm39)	Q89*	probably null	Het
H2ac25	C	A	11: 58,845,685 (GRCm39)	S41*	probably null	Het
Herc1	G	A	9: 66,371,981 (GRCm39)		probably null	Het
Ipo11	A	G	13: 107,007,271 (GRCm39)	V603A	probably benign	Het
Kifap3	G	A	1: 163,624,833 (GRCm39)	A130T	probably damaging	Het
Map4k1	C	T	7: 28,699,186 (GRCm39)		probably benign	Het
Mroh2b	T	A	15: 4,960,600 (GRCm39)	L778M	probably damaging	Het
Mtdh	T	C	15: 34,118,247 (GRCm39)	S344P	possibly damaging	Het
Ncoa3	T	G	2: 165,896,211 (GRCm39)	N371K	probably damaging	Het
Ncor2	C	A	5: 125,111,408 (GRCm39)		probably benign	Het
Nrn1l	A	G	8: 106,621,052 (GRCm39)	E48G	probably benign	Het
Nudcd1	A	G	15: 44,264,683 (GRCm39)	I271T	probably benign	Het
Or1e17	A	T	11: 73,831,593 (GRCm39)	I174F	possibly damaging	Het
Or2t1	T	C	14: 14,328,498 (GRCm38)	L129P	probably damaging	Het
Pard3b	A	G	1: 62,269,371 (GRCm39)	N653S	probably benign	Het
Plekhg1	A	C	10: 3,914,419 (GRCm39)	K1380N	probably damaging	Het
Ppara	T	A	15: 85,675,161 (GRCm39)	I210N	probably damaging	Het
Ppp2r5b	A	G	19: 6,279,077 (GRCm39)		probably benign	Het
Prkn	T	C	17: 11,286,027 (GRCm39)	F6L	probably damaging	Het
Prr14l	A	G	5: 32,985,337 (GRCm39)	L1386P	probably damaging	Het
Ralgapa1	A	G	12: 55,829,685 (GRCm39)		probably benign	Het
Reln	A	T	5: 22,134,240 (GRCm39)	L2563I	probably damaging	Het
Rps7	A	G	12: 28,681,200 (GRCm39)		probably benign	Het
Rslcan18	T	C	13: 67,246,686 (GRCm39)	K309E	probably damaging	Het
Sec14l5	C	T	16: 4,984,930 (GRCm39)	T92M	probably damaging	Het
Slc22a8	G	A	19: 8,585,514 (GRCm39)		probably benign	Het
Smad2	G	A	18: 76,395,692 (GRCm39)	A44T	probably damaging	Het
Smcr8	T	C	11: 60,671,048 (GRCm39)	V732A	possibly damaging	Het
Spata2l	A	G	8: 123,960,371 (GRCm39)	F306S	probably damaging	Het
Stab2	T	C	10: 86,677,491 (GRCm39)	D2552G	probably benign	Het
Tctn3	A	T	19: 40,595,711 (GRCm39)	L358H	possibly damaging	Het
Tk2	C	T	8: 104,975,146 (GRCm39)		probably benign	Het
Tm6sf2	C	T	8: 70,530,564 (GRCm39)	R215C	probably damaging	Het
Tmbim6	T	C	15: 99,304,555 (GRCm39)	I204T	probably damaging	Het
Tubgcp2	C	A	7: 139,579,260 (GRCm39)	W675C	probably damaging	Het
Usp48	T	A	4: 137,321,794 (GRCm39)	I62N	probably damaging	Het
Vmn2r74	T	C	7: 85,601,491 (GRCm39)	T716A	probably benign	Het
Vps13b	C	A	15: 35,879,949 (GRCm39)	T3008K	probably damaging	Het
Wnk1	G	A	6: 119,905,124 (GRCm39)		probably benign	Het

Other mutations in Klhl23

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02582:Klhl23	APN	2	69,654,582 (GRCm39)	missense	probably damaging	1.00
IGL02637:Klhl23	APN	2	69,659,258 (GRCm39)	nonsense	probably null
R0128:Klhl23	UTSW	2	69,664,310 (GRCm39)	missense	probably damaging	0.97
R0130:Klhl23	UTSW	2	69,664,310 (GRCm39)	missense	probably damaging	0.97
R0538:Klhl23	UTSW	2	69,654,757 (GRCm39)	missense	probably benign	0.01
R1466:Klhl23	UTSW	2	69,664,232 (GRCm39)	missense	probably damaging	1.00
R1466:Klhl23	UTSW	2	69,664,232 (GRCm39)	missense	probably damaging	1.00
R1584:Klhl23	UTSW	2	69,664,232 (GRCm39)	missense	probably damaging	1.00
R1970:Klhl23	UTSW	2	69,664,030 (GRCm39)	missense	probably damaging	1.00
R2102:Klhl23	UTSW	2	69,659,228 (GRCm39)	missense	probably damaging	1.00
R4236:Klhl23	UTSW	2	69,654,516 (GRCm39)	missense	probably damaging	0.98
R4473:Klhl23	UTSW	2	69,654,151 (GRCm39)	missense	possibly damaging	0.67
R5446:Klhl23	UTSW	2	69,654,582 (GRCm39)	missense	probably damaging	1.00
R5852:Klhl23	UTSW	2	69,654,613 (GRCm39)	missense	probably benign	0.44
R6143:Klhl23	UTSW	2	69,664,040 (GRCm39)	missense	possibly damaging	0.65
R6151:Klhl23	UTSW	2	69,655,198 (GRCm39)	missense	probably damaging	0.99
R6277:Klhl23	UTSW	2	69,664,096 (GRCm39)	missense	probably damaging	1.00
R7030:Klhl23	UTSW	2	69,664,310 (GRCm39)	missense	probably damaging	1.00
R7303:Klhl23	UTSW	2	69,655,045 (GRCm39)	missense	probably benign	0.42
R7724:Klhl23	UTSW	2	69,655,056 (GRCm39)	missense	probably benign	0.00
R8330:Klhl23	UTSW	2	69,654,496 (GRCm39)	missense	probably damaging	0.98
R8913:Klhl23	UTSW	2	69,664,234 (GRCm39)	missense	probably damaging	1.00
R9067:Klhl23	UTSW	2	69,664,083 (GRCm39)	missense	possibly damaging	0.94
R9720:Klhl23	UTSW	2	69,654,804 (GRCm39)	missense	possibly damaging	0.78
X0066:Klhl23	UTSW	2	69,654,132 (GRCm39)	start codon destroyed	possibly damaging	0.75

Predicted Primers

PCR Primer
(F):5'- CTATGACCCGGAACAGAACGAGTG -3'
(R):5'- TTCAGATCCCTGCCAGCTAGAGAC -3'

Sequencing Primer
(F):5'- CGAGTGGAGAGAGACGGC -3'
(R):5'- ctgcctcccaagttctgg -3'

Posted On

2013-05-23