Incidental Mutation 'R4992:Crocc'
ID |
386245 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Crocc
|
Ensembl Gene |
ENSMUSG00000040860 |
Gene Name |
ciliary rootlet coiled-coil, rootletin |
Synonyms |
|
MMRRC Submission |
042586-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.174)
|
Stock # |
R4992 (G1)
|
Quality Score |
160 |
Status
|
Validated
|
Chromosome |
4 |
Chromosomal Location |
140743948-140787861 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
G to A
at 140773977 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Alanine to Valine
at position 220
(A220V)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000099549
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000040222]
[ENSMUST00000097816]
[ENSMUST00000102491]
[ENSMUST00000144196]
[ENSMUST00000168157]
|
AlphaFold |
Q8CJ40 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000040222
AA Change: A56V
PolyPhen 2
Score 0.070 (Sensitivity: 0.94; Specificity: 0.84)
|
SMART Domains |
Protein: ENSMUSP00000037679 Gene: ENSMUSG00000040860 AA Change: A56V
Domain | Start | End | E-Value | Type |
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000097816
AA Change: A56V
PolyPhen 2
Score 0.070 (Sensitivity: 0.94; Specificity: 0.84)
|
SMART Domains |
Protein: ENSMUSP00000095425 Gene: ENSMUSG00000040860 AA Change: A56V
Domain | Start | End | E-Value | Type |
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000102491
AA Change: A220V
PolyPhen 2
Score 0.979 (Sensitivity: 0.75; Specificity: 0.96)
|
SMART Domains |
Protein: ENSMUSP00000099549 Gene: ENSMUSG00000040860 AA Change: A220V
Domain | Start | End | E-Value | Type |
low complexity region
|
2 |
15 |
N/A |
INTRINSIC |
low complexity region
|
77 |
93 |
N/A |
INTRINSIC |
Pfam:Rootletin
|
158 |
336 |
9.7e-65 |
PFAM |
low complexity region
|
354 |
381 |
N/A |
INTRINSIC |
internal_repeat_2
|
462 |
479 |
1.77e-6 |
PROSPERO |
low complexity region
|
493 |
514 |
N/A |
INTRINSIC |
internal_repeat_3
|
527 |
557 |
8.63e-6 |
PROSPERO |
internal_repeat_6
|
533 |
556 |
4.21e-5 |
PROSPERO |
low complexity region
|
561 |
575 |
N/A |
INTRINSIC |
low complexity region
|
576 |
594 |
N/A |
INTRINSIC |
low complexity region
|
617 |
638 |
N/A |
INTRINSIC |
low complexity region
|
788 |
807 |
N/A |
INTRINSIC |
low complexity region
|
863 |
880 |
N/A |
INTRINSIC |
low complexity region
|
1009 |
1039 |
N/A |
INTRINSIC |
internal_repeat_4
|
1050 |
1068 |
4.21e-5 |
PROSPERO |
internal_repeat_7
|
1057 |
1070 |
9.31e-5 |
PROSPERO |
internal_repeat_2
|
1057 |
1074 |
1.77e-6 |
PROSPERO |
internal_repeat_4
|
1061 |
1078 |
4.21e-5 |
PROSPERO |
internal_repeat_1
|
1076 |
1101 |
3.36e-8 |
PROSPERO |
internal_repeat_7
|
1192 |
1205 |
9.31e-5 |
PROSPERO |
low complexity region
|
1271 |
1288 |
N/A |
INTRINSIC |
internal_repeat_5
|
1302 |
1328 |
4.21e-5 |
PROSPERO |
low complexity region
|
1354 |
1365 |
N/A |
INTRINSIC |
low complexity region
|
1417 |
1433 |
N/A |
INTRINSIC |
low complexity region
|
1434 |
1453 |
N/A |
INTRINSIC |
low complexity region
|
1461 |
1473 |
N/A |
INTRINSIC |
internal_repeat_6
|
1697 |
1720 |
4.21e-5 |
PROSPERO |
low complexity region
|
1723 |
1740 |
N/A |
INTRINSIC |
coiled coil region
|
1744 |
1871 |
N/A |
INTRINSIC |
coiled coil region
|
1892 |
1996 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000126863
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000144196
|
SMART Domains |
Protein: ENSMUSP00000120555 Gene: ENSMUSG00000040860
Domain | Start | End | E-Value | Type |
coiled coil region
|
1 |
42 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000168157
AA Change: A56V
PolyPhen 2
Score 0.070 (Sensitivity: 0.94; Specificity: 0.84)
|
SMART Domains |
Protein: ENSMUSP00000126543 Gene: ENSMUSG00000040860 AA Change: A56V
Domain | Start | End | E-Value | Type |
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
Meta Mutation Damage Score |
0.1556 |
Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.5%
- 10x: 96.8%
- 20x: 93.7%
|
Validation Efficiency |
98% (84/86) |
MGI Phenotype |
PHENOTYPE: Mice homozygous for a null mutation show no apparent functional deficits in phototransduction and ciliary beating in sensory and motile cilia. However, photoreceptors degenerate over time, and lungs appear prone to pathological changes. [provided by MGI curators]
|
Allele List at MGI |
All alleles(4) : Targeted, knock-out(1) Gene trapped(3) |
Other mutations in this stock |
Total: 81 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
4930407I10Rik |
G |
A |
15: 81,948,203 (GRCm39) |
R700Q |
possibly damaging |
Het |
4930444P10Rik |
T |
A |
1: 16,151,101 (GRCm39) |
E27V |
probably damaging |
Het |
Acsm4 |
T |
A |
7: 119,310,640 (GRCm39) |
I509N |
probably benign |
Het |
Asb18 |
T |
C |
1: 89,880,585 (GRCm39) |
M143V |
probably benign |
Het |
Birc6 |
A |
G |
17: 74,996,251 (GRCm39) |
D4475G |
probably benign |
Het |
Bsn |
A |
T |
9: 107,992,747 (GRCm39) |
S1002T |
probably damaging |
Het |
Bub3 |
T |
C |
7: 131,162,535 (GRCm39) |
S33P |
probably damaging |
Het |
Ccna1 |
T |
A |
3: 54,957,311 (GRCm39) |
R35S |
probably damaging |
Het |
Cdc23 |
T |
A |
18: 34,779,972 (GRCm39) |
M119L |
probably benign |
Het |
Ces1a |
A |
G |
8: 93,771,650 (GRCm39) |
V49A |
probably benign |
Het |
Chi3l1 |
A |
T |
1: 134,116,364 (GRCm39) |
E282D |
probably benign |
Het |
Cstf1 |
A |
G |
2: 172,219,720 (GRCm39) |
Y277C |
probably damaging |
Het |
D930020B18Rik |
C |
G |
10: 121,490,666 (GRCm39) |
P89A |
probably damaging |
Het |
D930020B18Rik |
C |
T |
10: 121,490,667 (GRCm39) |
P89L |
probably damaging |
Het |
Dennd5a |
A |
G |
7: 109,493,919 (GRCm39) |
S1262P |
probably damaging |
Het |
Dnajb5 |
G |
A |
4: 42,953,386 (GRCm39) |
|
probably null |
Het |
E330034G19Rik |
A |
G |
14: 24,357,064 (GRCm39) |
K200R |
unknown |
Het |
Ect2l |
A |
G |
10: 18,048,477 (GRCm39) |
F156S |
probably benign |
Het |
Egf |
T |
C |
3: 129,505,179 (GRCm39) |
|
probably null |
Het |
Elmo1 |
T |
C |
13: 20,526,689 (GRCm39) |
F413S |
probably damaging |
Het |
Elmo3 |
T |
A |
8: 106,036,133 (GRCm39) |
Y607* |
probably null |
Het |
Eno3 |
A |
G |
11: 70,549,473 (GRCm39) |
D98G |
probably damaging |
Het |
Ephb2 |
A |
G |
4: 136,388,150 (GRCm39) |
V651A |
probably damaging |
Het |
Fbp1 |
C |
T |
13: 63,012,888 (GRCm39) |
V102I |
probably benign |
Het |
Gcn1 |
T |
C |
5: 115,737,225 (GRCm39) |
V1321A |
probably benign |
Het |
Gimd1 |
A |
T |
3: 132,340,718 (GRCm39) |
Y78F |
probably benign |
Het |
Glmn |
T |
G |
5: 107,705,167 (GRCm39) |
D483A |
probably damaging |
Het |
Gsr |
C |
T |
8: 34,183,941 (GRCm39) |
T401I |
probably damaging |
Het |
Htr3b |
G |
A |
9: 48,870,518 (GRCm39) |
H62Y |
possibly damaging |
Het |
Ifna6 |
T |
C |
4: 88,745,777 (GRCm39) |
V42A |
probably benign |
Het |
Igkv4-80 |
A |
C |
6: 68,993,649 (GRCm39) |
S81A |
probably benign |
Het |
Inpp4b |
A |
T |
8: 82,759,837 (GRCm39) |
R627S |
probably damaging |
Het |
Kif13a |
C |
T |
13: 46,930,639 (GRCm39) |
V142M |
probably damaging |
Het |
Lims1 |
A |
C |
10: 58,246,063 (GRCm39) |
|
probably benign |
Het |
Ltn1 |
T |
C |
16: 87,202,475 (GRCm39) |
T1059A |
possibly damaging |
Het |
Lyst |
T |
C |
13: 13,835,748 (GRCm39) |
L1810P |
probably damaging |
Het |
Mboat1 |
T |
G |
13: 30,386,343 (GRCm39) |
I119R |
possibly damaging |
Het |
Mgat3 |
T |
A |
15: 80,096,743 (GRCm39) |
D523E |
probably benign |
Het |
Mphosph9 |
T |
C |
5: 124,442,253 (GRCm39) |
E395G |
probably damaging |
Het |
Mtcl1 |
G |
T |
17: 66,649,834 (GRCm39) |
P1877Q |
probably damaging |
Het |
Myo6 |
T |
C |
9: 80,190,792 (GRCm39) |
V781A |
possibly damaging |
Het |
Ncoa3 |
T |
A |
2: 165,911,859 (GRCm39) |
M1395K |
probably benign |
Het |
Nhlrc2 |
T |
A |
19: 56,558,966 (GRCm39) |
D150E |
probably benign |
Het |
Nlrp9a |
T |
C |
7: 26,256,811 (GRCm39) |
V54A |
probably benign |
Het |
Or1e32 |
G |
A |
11: 73,705,146 (GRCm39) |
T254I |
probably damaging |
Het |
Or3a1d |
A |
G |
11: 74,238,023 (GRCm39) |
I129T |
probably damaging |
Het |
Parp14 |
A |
T |
16: 35,661,512 (GRCm39) |
C1479S |
probably benign |
Het |
Pdcd1lg2 |
T |
C |
19: 29,423,484 (GRCm39) |
V176A |
probably damaging |
Het |
Pibf1 |
T |
A |
14: 99,388,103 (GRCm39) |
N416K |
probably damaging |
Het |
Pip4p1 |
A |
G |
14: 51,166,690 (GRCm39) |
V179A |
probably damaging |
Het |
Polb |
A |
T |
8: 23,135,087 (GRCm39) |
V115E |
probably damaging |
Het |
Polq |
T |
A |
16: 36,881,524 (GRCm39) |
N1229K |
possibly damaging |
Het |
Ppp1r21 |
A |
T |
17: 88,876,508 (GRCm39) |
D440V |
probably benign |
Het |
Ppp2ca |
T |
A |
11: 52,004,033 (GRCm39) |
H63Q |
possibly damaging |
Het |
Prl7a1 |
C |
T |
13: 27,819,669 (GRCm39) |
|
probably null |
Het |
Rgs1 |
C |
A |
1: 144,122,060 (GRCm39) |
K77N |
probably damaging |
Het |
Rnf112 |
T |
A |
11: 61,343,537 (GRCm39) |
I100F |
possibly damaging |
Het |
Rnf139 |
G |
T |
15: 58,770,325 (GRCm39) |
E117* |
probably null |
Het |
Robo1 |
G |
A |
16: 72,776,756 (GRCm39) |
V743I |
probably damaging |
Het |
Scarf1 |
T |
C |
11: 75,416,841 (GRCm39) |
V761A |
probably benign |
Het |
Scarf1 |
T |
C |
11: 75,413,056 (GRCm39) |
L434P |
probably damaging |
Het |
Sgsm1 |
A |
T |
5: 113,430,486 (GRCm39) |
S300T |
possibly damaging |
Het |
Slc26a7 |
T |
G |
4: 14,565,508 (GRCm39) |
T192P |
probably damaging |
Het |
Smarcc2 |
A |
G |
10: 128,310,579 (GRCm39) |
K403E |
probably damaging |
Het |
Snai3 |
G |
A |
8: 123,183,071 (GRCm39) |
T158M |
possibly damaging |
Het |
Spata31d1a |
T |
C |
13: 59,850,965 (GRCm39) |
N388D |
probably benign |
Het |
Sptlc3 |
G |
A |
2: 139,437,923 (GRCm39) |
V406I |
probably benign |
Het |
Tgds |
A |
C |
14: 118,355,175 (GRCm39) |
Y197D |
probably damaging |
Het |
Tll1 |
G |
T |
8: 64,546,978 (GRCm39) |
R323S |
probably damaging |
Het |
Trim14 |
A |
G |
4: 46,507,110 (GRCm39) |
Y369H |
probably damaging |
Het |
Ube2nl |
C |
T |
7: 61,199,112 (GRCm39) |
|
noncoding transcript |
Het |
Ube3a |
T |
A |
7: 58,934,568 (GRCm39) |
D560E |
possibly damaging |
Het |
Vmn2r10 |
A |
G |
5: 109,145,592 (GRCm39) |
V505A |
possibly damaging |
Het |
Vmn2r114 |
T |
G |
17: 23,510,765 (GRCm39) |
I572L |
probably benign |
Het |
Vmn2r26 |
A |
T |
6: 124,003,070 (GRCm39) |
Q160L |
probably benign |
Het |
Vmn2r75 |
A |
C |
7: 85,815,375 (GRCm39) |
|
probably null |
Het |
Vps8 |
A |
G |
16: 21,280,158 (GRCm39) |
K336E |
possibly damaging |
Het |
Zfp324 |
T |
C |
7: 12,703,300 (GRCm39) |
S32P |
probably benign |
Het |
Zfp366 |
T |
C |
13: 99,366,003 (GRCm39) |
I388T |
possibly damaging |
Het |
Zfp68 |
A |
T |
5: 138,605,599 (GRCm39) |
N203K |
possibly damaging |
Het |
Zhx2 |
A |
T |
15: 57,686,983 (GRCm39) |
N784I |
probably damaging |
Het |
|
Other mutations in Crocc |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01389:Crocc
|
APN |
4 |
140,749,423 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01474:Crocc
|
APN |
4 |
140,762,703 (GRCm39) |
splice site |
probably benign |
|
IGL01859:Crocc
|
APN |
4 |
140,756,601 (GRCm39) |
missense |
probably benign |
0.07 |
IGL02161:Crocc
|
APN |
4 |
140,761,302 (GRCm39) |
missense |
probably benign |
0.01 |
IGL02244:Crocc
|
APN |
4 |
140,765,231 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02970:Crocc
|
APN |
4 |
140,757,557 (GRCm39) |
missense |
possibly damaging |
0.49 |
N/A:Crocc
|
UTSW |
4 |
140,749,057 (GRCm39) |
missense |
probably damaging |
1.00 |
R0158:Crocc
|
UTSW |
4 |
140,769,553 (GRCm39) |
splice site |
probably benign |
|
R0280:Crocc
|
UTSW |
4 |
140,755,737 (GRCm39) |
missense |
probably damaging |
1.00 |
R0448:Crocc
|
UTSW |
4 |
140,769,502 (GRCm39) |
missense |
probably damaging |
1.00 |
R0532:Crocc
|
UTSW |
4 |
140,757,558 (GRCm39) |
missense |
possibly damaging |
0.95 |
R0597:Crocc
|
UTSW |
4 |
140,744,382 (GRCm39) |
missense |
probably benign |
|
R0597:Crocc
|
UTSW |
4 |
140,747,224 (GRCm39) |
missense |
probably benign |
0.06 |
R0761:Crocc
|
UTSW |
4 |
140,774,387 (GRCm39) |
missense |
probably benign |
0.01 |
R0761:Crocc
|
UTSW |
4 |
140,757,087 (GRCm39) |
missense |
probably benign |
0.00 |
R1238:Crocc
|
UTSW |
4 |
140,762,675 (GRCm39) |
missense |
probably benign |
0.00 |
R1460:Crocc
|
UTSW |
4 |
140,756,551 (GRCm39) |
nonsense |
probably null |
|
R1515:Crocc
|
UTSW |
4 |
140,747,048 (GRCm39) |
missense |
probably benign |
0.00 |
R1557:Crocc
|
UTSW |
4 |
140,752,776 (GRCm39) |
missense |
probably damaging |
0.96 |
R1561:Crocc
|
UTSW |
4 |
140,757,579 (GRCm39) |
missense |
probably damaging |
1.00 |
R1641:Crocc
|
UTSW |
4 |
140,744,388 (GRCm39) |
missense |
probably benign |
0.00 |
R1709:Crocc
|
UTSW |
4 |
140,753,410 (GRCm39) |
critical splice donor site |
probably null |
|
R1785:Crocc
|
UTSW |
4 |
140,749,113 (GRCm39) |
missense |
probably damaging |
0.99 |
R1786:Crocc
|
UTSW |
4 |
140,749,113 (GRCm39) |
missense |
probably damaging |
0.99 |
R1793:Crocc
|
UTSW |
4 |
140,746,620 (GRCm39) |
missense |
probably damaging |
1.00 |
R1897:Crocc
|
UTSW |
4 |
140,746,047 (GRCm39) |
missense |
probably damaging |
1.00 |
R1935:Crocc
|
UTSW |
4 |
140,761,369 (GRCm39) |
missense |
possibly damaging |
0.78 |
R2037:Crocc
|
UTSW |
4 |
140,774,253 (GRCm39) |
critical splice donor site |
probably null |
|
R2127:Crocc
|
UTSW |
4 |
140,744,407 (GRCm39) |
missense |
probably damaging |
1.00 |
R2129:Crocc
|
UTSW |
4 |
140,744,407 (GRCm39) |
missense |
probably damaging |
1.00 |
R2130:Crocc
|
UTSW |
4 |
140,756,413 (GRCm39) |
missense |
probably benign |
0.04 |
R2136:Crocc
|
UTSW |
4 |
140,760,265 (GRCm39) |
missense |
probably damaging |
1.00 |
R2298:Crocc
|
UTSW |
4 |
140,752,770 (GRCm39) |
missense |
probably benign |
0.30 |
R2847:Crocc
|
UTSW |
4 |
140,746,067 (GRCm39) |
missense |
probably damaging |
0.97 |
R2848:Crocc
|
UTSW |
4 |
140,746,067 (GRCm39) |
missense |
probably damaging |
0.97 |
R2913:Crocc
|
UTSW |
4 |
140,747,661 (GRCm39) |
missense |
probably damaging |
1.00 |
R3415:Crocc
|
UTSW |
4 |
140,773,758 (GRCm39) |
missense |
possibly damaging |
0.75 |
R3416:Crocc
|
UTSW |
4 |
140,773,758 (GRCm39) |
missense |
possibly damaging |
0.75 |
R3417:Crocc
|
UTSW |
4 |
140,773,758 (GRCm39) |
missense |
possibly damaging |
0.75 |
R4082:Crocc
|
UTSW |
4 |
140,761,282 (GRCm39) |
splice site |
probably null |
|
R4454:Crocc
|
UTSW |
4 |
140,747,716 (GRCm39) |
missense |
possibly damaging |
0.52 |
R4591:Crocc
|
UTSW |
4 |
140,745,983 (GRCm39) |
missense |
probably damaging |
1.00 |
R4597:Crocc
|
UTSW |
4 |
140,747,088 (GRCm39) |
missense |
probably damaging |
1.00 |
R4984:Crocc
|
UTSW |
4 |
140,761,763 (GRCm39) |
missense |
probably damaging |
1.00 |
R5109:Crocc
|
UTSW |
4 |
140,755,722 (GRCm39) |
missense |
probably damaging |
1.00 |
R5143:Crocc
|
UTSW |
4 |
140,768,350 (GRCm39) |
missense |
probably benign |
0.01 |
R5381:Crocc
|
UTSW |
4 |
140,756,622 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5684:Crocc
|
UTSW |
4 |
140,778,455 (GRCm39) |
missense |
probably damaging |
0.99 |
R5757:Crocc
|
UTSW |
4 |
140,770,875 (GRCm39) |
missense |
probably damaging |
1.00 |
R5795:Crocc
|
UTSW |
4 |
140,769,118 (GRCm39) |
frame shift |
probably null |
|
R5796:Crocc
|
UTSW |
4 |
140,769,118 (GRCm39) |
frame shift |
probably null |
|
R5798:Crocc
|
UTSW |
4 |
140,769,118 (GRCm39) |
frame shift |
probably null |
|
R5815:Crocc
|
UTSW |
4 |
140,762,507 (GRCm39) |
missense |
probably damaging |
0.99 |
R5955:Crocc
|
UTSW |
4 |
140,745,229 (GRCm39) |
missense |
possibly damaging |
0.75 |
R6031:Crocc
|
UTSW |
4 |
140,761,668 (GRCm39) |
critical splice donor site |
probably null |
|
R6063:Crocc
|
UTSW |
4 |
140,773,851 (GRCm39) |
missense |
probably damaging |
1.00 |
R6063:Crocc
|
UTSW |
4 |
140,769,032 (GRCm39) |
missense |
probably benign |
0.08 |
R7086:Crocc
|
UTSW |
4 |
140,774,368 (GRCm39) |
missense |
possibly damaging |
0.47 |
R7282:Crocc
|
UTSW |
4 |
140,749,652 (GRCm39) |
missense |
probably damaging |
1.00 |
R7293:Crocc
|
UTSW |
4 |
140,770,867 (GRCm39) |
missense |
probably benign |
0.17 |
R7404:Crocc
|
UTSW |
4 |
140,753,497 (GRCm39) |
missense |
possibly damaging |
0.46 |
R7571:Crocc
|
UTSW |
4 |
140,773,360 (GRCm39) |
critical splice acceptor site |
probably null |
|
R7646:Crocc
|
UTSW |
4 |
140,748,966 (GRCm39) |
missense |
probably null |
0.94 |
R7782:Crocc
|
UTSW |
4 |
140,752,597 (GRCm39) |
missense |
probably benign |
0.05 |
R8053:Crocc
|
UTSW |
4 |
140,770,230 (GRCm39) |
critical splice donor site |
probably null |
|
R8762:Crocc
|
UTSW |
4 |
140,761,369 (GRCm39) |
missense |
possibly damaging |
0.78 |
R9021:Crocc
|
UTSW |
4 |
140,749,674 (GRCm39) |
missense |
probably benign |
0.00 |
R9188:Crocc
|
UTSW |
4 |
140,747,151 (GRCm39) |
missense |
probably benign |
0.04 |
R9272:Crocc
|
UTSW |
4 |
140,747,132 (GRCm39) |
missense |
probably benign |
0.00 |
R9411:Crocc
|
UTSW |
4 |
140,749,577 (GRCm39) |
critical splice donor site |
probably null |
|
R9647:Crocc
|
UTSW |
4 |
140,774,335 (GRCm39) |
missense |
probably benign |
0.00 |
R9667:Crocc
|
UTSW |
4 |
140,748,988 (GRCm39) |
missense |
probably damaging |
1.00 |
R9706:Crocc
|
UTSW |
4 |
140,746,046 (GRCm39) |
missense |
possibly damaging |
0.76 |
R9780:Crocc
|
UTSW |
4 |
140,756,556 (GRCm39) |
missense |
probably benign |
0.01 |
X0065:Crocc
|
UTSW |
4 |
140,769,103 (GRCm39) |
missense |
possibly damaging |
0.57 |
|
Predicted Primers |
PCR Primer
(F):5'- ACTGGTCACCTTGCGTATGTC -3'
(R):5'- TTCTGCAGTACAAGAAGCAGTG -3'
Sequencing Primer
(F):5'- GTATGTCCTCGCTCAGAGC -3'
(R):5'- AGCAGTGCTCAGAGCTGG -3'
|
Posted On |
2016-05-10 |