Incidental Mutation 'R5000:Cnksr3'
ID 389838
Institutional Source Beutler Lab
Gene Symbol Cnksr3
Ensembl Gene ENSMUSG00000015202
Gene Name Cnksr family member 3
Synonyms Magi1
MMRRC Submission 042594-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.081) question?
Stock # R5000 (G1)
Quality Score 225
Status Validated
Chromosome 10
Chromosomal Location 7069063-7162237 bp(-) (GRCm39)
Type of Mutation nonsense
DNA Base Change (assembly) G to A at 7076746 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Glutamine to Stop codon at position 149 (Q149*)
Ref Sequence ENSEMBL: ENSMUSP00000115863 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000015346] [ENSMUST00000150282]
AlphaFold Q8BMA3
Predicted Effect probably null
Transcript: ENSMUST00000015346
AA Change: Q390*
SMART Domains Protein: ENSMUSP00000015346
Gene: ENSMUSG00000015202
AA Change: Q390*

DomainStartEndE-ValueType
SAM 4 72 7.25e-15 SMART
Pfam:CRIC_ras_sig 80 172 3.3e-39 PFAM
PDZ 221 293 4.65e-10 SMART
low complexity region 311 329 N/A INTRINSIC
Pfam:DUF1170 332 545 3.6e-104 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000150282
AA Change: Q149*
SMART Domains Protein: ENSMUSP00000115863
Gene: ENSMUSG00000015202
AA Change: Q149*

DomainStartEndE-ValueType
Pfam:PDZ 1 49 6e-8 PFAM
low complexity region 70 88 N/A INTRINSIC
Pfam:DUF1170 89 305 4.4e-90 PFAM
Meta Mutation Damage Score 0.9755 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.4%
  • 10x: 96.6%
  • 20x: 93.4%
Validation Efficiency 98% (97/99)
Allele List at MGI
Other mutations in this stock
Total: 88 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
2310022A10Rik T A 7: 27,255,946 (GRCm39) F11Y probably benign Het
Abca5 A G 11: 110,201,050 (GRCm39) L450P probably damaging Het
Abi1 T A 2: 22,840,211 (GRCm39) R357W probably damaging Het
Acot7 G A 4: 152,270,820 (GRCm39) G55R probably benign Het
Aicda G A 6: 122,538,826 (GRCm39) V14I probably damaging Het
Anxa4 G T 6: 86,742,766 (GRCm39) probably benign Het
Apobr T A 7: 126,185,729 (GRCm39) D413E possibly damaging Het
Ash1l T C 3: 88,965,941 (GRCm39) Y2448H probably damaging Het
Atf7ip A G 6: 136,559,426 (GRCm39) E749G probably damaging Het
Atp8b3 A T 10: 80,357,676 (GRCm39) N1114K possibly damaging Het
Bdnf C A 2: 109,553,993 (GRCm39) N122K probably benign Het
Boc A T 16: 44,310,517 (GRCm39) I801N probably damaging Het
Brap A T 5: 121,800,089 (GRCm39) K37* probably null Het
Ccar1 C T 10: 62,586,784 (GRCm39) E885K unknown Het
Ccdc103 A G 11: 102,774,932 (GRCm39) N177S probably benign Het
Ccdc116 G A 16: 16,959,657 (GRCm39) P344L possibly damaging Het
Cdca5 T C 19: 6,135,463 (GRCm39) S28P possibly damaging Het
Ceacam20 T C 7: 19,699,453 (GRCm39) I14T probably damaging Het
Chrnb1 A T 11: 69,677,858 (GRCm39) V298E probably damaging Het
Csnk1a1 T C 18: 61,711,840 (GRCm39) F97L probably damaging Het
Dag1 A T 9: 108,085,216 (GRCm39) S642T probably benign Het
Dedd2 A G 7: 24,903,068 (GRCm39) V297A possibly damaging Het
Dhcr7 C T 7: 143,395,060 (GRCm39) T189M possibly damaging Het
Dlgap1 T C 17: 71,073,053 (GRCm39) S691P probably damaging Het
Dmgdh A C 13: 93,825,046 (GRCm39) H123P probably damaging Het
Dnah6 C T 6: 73,121,798 (GRCm39) V1395I probably benign Het
Dnah7a T C 1: 53,606,201 (GRCm39) Y1273C probably damaging Het
Dnah7b T A 1: 46,138,663 (GRCm39) L235* probably null Het
Elac2 T C 11: 64,876,379 (GRCm39) F3L probably benign Het
Elovl7 A T 13: 108,410,915 (GRCm39) K163N probably benign Het
Epg5 T C 18: 77,997,376 (GRCm39) V413A probably benign Het
Espl1 T A 15: 102,206,986 (GRCm39) L150Q probably damaging Het
F2rl3 T A 8: 73,489,307 (GRCm39) L178Q probably damaging Het
Fam120a T C 13: 49,051,143 (GRCm39) E754G probably damaging Het
Fam53b T C 7: 132,317,730 (GRCm39) N304S probably benign Het
Fbxo41 T C 6: 85,460,901 (GRCm39) E269G probably damaging Het
Fcrla T C 1: 170,749,959 (GRCm39) T4A probably benign Het
Frmpd1 A T 4: 45,261,931 (GRCm39) probably null Het
Gm9376 A G 14: 118,504,702 (GRCm39) M45V probably benign Het
Gpr68 G A 12: 100,844,596 (GRCm39) A316V probably benign Het
Hmgcl G A 4: 135,689,511 (GRCm39) C323Y probably benign Het
Hnrnpu T C 1: 178,156,941 (GRCm39) probably benign Het
Ier2 T A 8: 85,389,353 (GRCm39) I10F probably damaging Het
Ip6k1 C T 9: 107,922,798 (GRCm39) Q234* probably null Het
Llgl2 T C 11: 115,735,728 (GRCm39) V108A probably benign Het
Lrfn3 T C 7: 30,059,805 (GRCm39) N140S possibly damaging Het
Lrig1 T A 6: 94,588,430 (GRCm39) H573L probably damaging Het
Lrrk2 T A 15: 91,634,081 (GRCm39) W1393R probably damaging Het
Mrc1 T A 2: 14,249,000 (GRCm39) Y179N probably damaging Het
Mtfr1 C T 3: 19,265,743 (GRCm39) L93F probably damaging Het
Muc19 T C 15: 91,757,429 (GRCm39) noncoding transcript Het
Ndst2 C T 14: 20,774,975 (GRCm39) probably null Het
Nmd3 A T 3: 69,624,735 (GRCm39) probably benign Het
Nsd3 A G 8: 26,172,593 (GRCm39) Y784C probably damaging Het
Or4a27 A T 2: 88,559,910 (GRCm39) I11N probably damaging Het
Or7a36 G A 10: 78,820,514 (GRCm39) V297I probably benign Het
Papln A G 12: 83,821,663 (GRCm39) Y297C probably damaging Het
Pdhx T C 2: 102,871,385 (GRCm39) probably null Het
Pdpk1 T C 17: 24,330,019 (GRCm39) T6A possibly damaging Het
Prcp T C 7: 92,568,368 (GRCm39) W267R probably damaging Het
Prg2 T C 2: 84,812,367 (GRCm39) S26P probably benign Het
Psg26 A T 7: 18,214,057 (GRCm39) Y202N possibly damaging Het
Psrc1 T C 3: 108,287,839 (GRCm39) probably benign Het
Rap1gds1 A T 3: 138,662,011 (GRCm39) M366K probably damaging Het
Robo4 G T 9: 37,319,664 (GRCm39) R527L probably benign Het
Sel1l3 G A 5: 53,357,776 (GRCm39) T72M probably damaging Het
Selenoo G A 15: 88,978,387 (GRCm39) R270H probably damaging Het
Sema3d A G 5: 12,498,005 (GRCm39) T4A probably benign Het
Shroom1 A T 11: 53,357,944 (GRCm39) probably benign Het
Slc25a19 T C 11: 115,507,497 (GRCm39) probably null Het
Snx29 A C 16: 11,221,371 (GRCm39) I266L probably damaging Het
Spo11 T C 2: 172,831,193 (GRCm39) S255P probably damaging Het
Spock3 T C 8: 63,698,158 (GRCm39) V167A possibly damaging Het
Tmc7 A G 7: 118,158,077 (GRCm39) probably null Het
Tmtc4 A G 14: 123,170,743 (GRCm39) V509A possibly damaging Het
Trim24 A G 6: 37,935,547 (GRCm39) D880G probably benign Het
Ube2j2 G A 4: 156,030,841 (GRCm39) M1I probably null Het
Ubr4 T A 4: 139,163,480 (GRCm39) C2627S probably damaging Het
Unc5d A T 8: 29,205,775 (GRCm39) M512K possibly damaging Het
Usp18 A G 6: 121,229,479 (GRCm39) R33G possibly damaging Het
Utp23 T A 15: 51,745,569 (GRCm39) V23D probably damaging Het
Wdr17 T A 8: 55,118,161 (GRCm39) M512L possibly damaging Het
Wdr64 T A 1: 175,553,941 (GRCm39) probably null Het
Zbtb6 T C 2: 37,319,251 (GRCm39) T226A probably benign Het
Zc3hc1 T A 6: 30,375,987 (GRCm39) H191L possibly damaging Het
Zdhhc4 C A 5: 143,310,688 (GRCm39) C48F probably damaging Het
Zfp335 T A 2: 164,736,588 (GRCm39) T1016S probably benign Het
Zfp583 A G 7: 6,328,473 (GRCm39) Y39H probably damaging Het
Other mutations in Cnksr3
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01303:Cnksr3 APN 10 7,104,281 (GRCm39) critical splice donor site probably null
IGL01583:Cnksr3 APN 10 7,070,512 (GRCm39) missense probably benign
IGL02374:Cnksr3 APN 10 7,070,335 (GRCm39) missense probably damaging 1.00
IGL02541:Cnksr3 APN 10 7,085,073 (GRCm39) missense probably damaging 1.00
IGL02551:Cnksr3 APN 10 7,102,912 (GRCm39) missense probably damaging 1.00
IGL02975:Cnksr3 APN 10 7,088,354 (GRCm39) critical splice donor site probably null
R0652:Cnksr3 UTSW 10 7,070,463 (GRCm39) missense probably damaging 1.00
R1451:Cnksr3 UTSW 10 7,076,830 (GRCm39) missense probably null 0.93
R1453:Cnksr3 UTSW 10 7,079,132 (GRCm39) missense probably benign 0.00
R1847:Cnksr3 UTSW 10 7,104,324 (GRCm39) missense probably benign 0.01
R1852:Cnksr3 UTSW 10 7,070,539 (GRCm39) missense probably benign 0.06
R3002:Cnksr3 UTSW 10 7,102,856 (GRCm39) splice site probably benign
R4621:Cnksr3 UTSW 10 7,076,182 (GRCm39) missense possibly damaging 0.85
R4835:Cnksr3 UTSW 10 7,110,757 (GRCm39) missense possibly damaging 0.76
R4941:Cnksr3 UTSW 10 7,102,925 (GRCm39) missense probably benign 0.07
R4981:Cnksr3 UTSW 10 7,110,777 (GRCm39) missense probably benign 0.00
R5001:Cnksr3 UTSW 10 7,076,746 (GRCm39) nonsense probably null
R5267:Cnksr3 UTSW 10 7,076,633 (GRCm39) critical splice donor site probably null
R5322:Cnksr3 UTSW 10 7,085,078 (GRCm39) missense probably damaging 1.00
R5623:Cnksr3 UTSW 10 7,070,548 (GRCm39) missense probably damaging 1.00
R5853:Cnksr3 UTSW 10 7,092,977 (GRCm39) missense probably benign 0.09
R5930:Cnksr3 UTSW 10 7,092,993 (GRCm39) missense probably benign
R6459:Cnksr3 UTSW 10 7,076,820 (GRCm39) missense probably benign 0.00
R6893:Cnksr3 UTSW 10 7,085,129 (GRCm39) splice site probably null
R6941:Cnksr3 UTSW 10 7,076,758 (GRCm39) missense probably damaging 1.00
R6949:Cnksr3 UTSW 10 7,110,757 (GRCm39) missense probably benign 0.02
R7075:Cnksr3 UTSW 10 7,102,931 (GRCm39) missense probably benign 0.33
R7487:Cnksr3 UTSW 10 7,085,097 (GRCm39) missense probably benign 0.01
R8165:Cnksr3 UTSW 10 7,104,467 (GRCm39) missense probably damaging 0.99
R8181:Cnksr3 UTSW 10 7,070,475 (GRCm39) missense possibly damaging 0.94
R8472:Cnksr3 UTSW 10 7,084,532 (GRCm39) missense probably damaging 0.98
R8885:Cnksr3 UTSW 10 7,090,201 (GRCm39) unclassified probably benign
R8887:Cnksr3 UTSW 10 7,104,467 (GRCm39) missense probably damaging 0.99
R8930:Cnksr3 UTSW 10 7,110,780 (GRCm39) missense probably damaging 1.00
R8932:Cnksr3 UTSW 10 7,110,780 (GRCm39) missense probably damaging 1.00
R9195:Cnksr3 UTSW 10 7,088,379 (GRCm39) missense probably damaging 1.00
R9617:Cnksr3 UTSW 10 7,079,021 (GRCm39) critical splice donor site probably null
Z1176:Cnksr3 UTSW 10 7,084,544 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- CAAGTTCATGCCAGAGCTCC -3'
(R):5'- GCTTCTTCTCCAGTGGGAAG -3'

Sequencing Primer
(F):5'- GTTCATGCCAGAGCTCCAAATAAAG -3'
(R):5'- TCCAGTGGGAAGGAGACGTG -3'
Posted On 2016-06-06