Incidental Mutation 'R5055:Ipo9'
ID 390745
Institutional Source Beutler Lab
Gene Symbol Ipo9
Ensembl Gene ENSMUSG00000041879
Gene Name importin 9
Synonyms 0710008K06Rik, Imp9
MMRRC Submission 042645-MU
Accession Numbers
Essential gene? Essential (E-score: 1.000) question?
Stock # R5055 (G1)
Quality Score 225
Status Validated
Chromosome 1
Chromosomal Location 135310050-135358237 bp(-) (GRCm39)
Type of Mutation nonsense
DNA Base Change (assembly) C to A at 135330097 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Glutamic Acid to Stop codon at position 448 (E448*)
Ref Sequence ENSEMBL: ENSMUSP00000124779 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000041023] [ENSMUST00000161032] [ENSMUST00000161189] [ENSMUST00000161838]
AlphaFold no structure available at present
Predicted Effect probably null
Transcript: ENSMUST00000041023
AA Change: E448*
SMART Domains Protein: ENSMUSP00000036093
Gene: ENSMUSG00000041879
AA Change: E448*

DomainStartEndE-ValueType
low complexity region 2 10 N/A INTRINSIC
IBN_N 43 119 3.83e-7 SMART
low complexity region 911 922 N/A INTRINSIC
low complexity region 978 990 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000159017
Predicted Effect probably null
Transcript: ENSMUST00000161032
AA Change: E448*
SMART Domains Protein: ENSMUSP00000124779
Gene: ENSMUSG00000041879
AA Change: E448*

DomainStartEndE-ValueType
low complexity region 2 10 N/A INTRINSIC
IBN_N 43 119 3.83e-7 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000161135
Predicted Effect probably benign
Transcript: ENSMUST00000161189
SMART Domains Protein: ENSMUSP00000124492
Gene: ENSMUSG00000041879

DomainStartEndE-ValueType
low complexity region 2 10 N/A INTRINSIC
SCOP:d1i6la_ 21 52 4e-3 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000161258
Predicted Effect noncoding transcript
Transcript: ENSMUST00000161704
Predicted Effect probably benign
Transcript: ENSMUST00000161838
SMART Domains Protein: ENSMUSP00000125646
Gene: ENSMUSG00000041879

DomainStartEndE-ValueType
low complexity region 2 10 N/A INTRINSIC
SCOP:d1i6la_ 21 52 4e-3 SMART
Meta Mutation Damage Score 0.9755 question?
Coding Region Coverage
  • 1x: 99.1%
  • 3x: 98.4%
  • 10x: 96.5%
  • 20x: 92.9%
Validation Efficiency 98% (84/86)
MGI Phenotype PHENOTYPE: Mice homozygous for a transgenic gene disruption exhibit embryonic lethality at E7. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 77 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adam19 G A 11: 46,013,996 (GRCm39) V329I probably damaging Het
Adgrl3 C A 5: 81,794,398 (GRCm39) A541E possibly damaging Het
Agbl1 A T 7: 76,063,325 (GRCm39) I263F probably damaging Het
Ash1l T C 3: 88,930,519 (GRCm39) probably null Het
Bccip A G 7: 133,316,652 (GRCm39) T91A probably benign Het
Bnc1 A T 7: 81,624,163 (GRCm39) F355I probably damaging Het
Bpifa2 A T 2: 153,855,630 (GRCm39) D185V probably damaging Het
Capn8 T A 1: 182,399,526 (GRCm39) V89D probably damaging Het
Cfap46 A T 7: 139,241,106 (GRCm39) M421K probably damaging Het
Chd2 A T 7: 73,130,256 (GRCm39) L800M probably damaging Het
Chd4 A G 6: 125,077,949 (GRCm39) D137G possibly damaging Het
Crtap A G 9: 114,219,208 (GRCm39) Y154H probably benign Het
Ctdp1 T A 18: 80,499,303 (GRCm39) Q213L probably damaging Het
Cts6 T C 13: 61,344,164 (GRCm39) Y296C probably damaging Het
Daxx G T 17: 34,131,134 (GRCm39) V354F probably benign Het
Dnah2 A G 11: 69,411,599 (GRCm39) I341T possibly damaging Het
Epha2 A G 4: 141,036,380 (GRCm39) D272G probably benign Het
Etfa A G 9: 55,407,417 (GRCm39) V24A probably damaging Het
Fbxl7 C A 15: 26,553,022 (GRCm39) G82W probably damaging Het
Fcamr G A 1: 130,739,174 (GRCm39) C158Y probably damaging Het
Fyb1 A C 15: 6,614,630 (GRCm39) probably benign Het
Gars1 G A 6: 55,045,077 (GRCm39) R454H probably damaging Het
Ghsr T C 3: 27,426,421 (GRCm39) V159A probably benign Het
Glp1r A T 17: 31,137,861 (GRCm39) Q97H probably benign Het
Gm27047 T C 6: 130,606,909 (GRCm39) noncoding transcript Het
Igkv3-3 A C 6: 70,664,223 (GRCm39) I22L probably benign Het
Inpp5b G T 4: 124,636,824 (GRCm39) probably null Het
Itgb2l A T 16: 96,229,003 (GRCm39) I400N probably damaging Het
Kat6b T A 14: 21,567,062 (GRCm39) H40Q probably damaging Het
Kcna7 G A 7: 45,056,015 (GRCm39) R77H probably damaging Het
Kcnq2 G T 2: 180,728,554 (GRCm39) probably benign Het
Klf7 T C 1: 64,118,439 (GRCm39) T53A probably benign Het
Kmt2a A G 9: 44,729,649 (GRCm39) probably benign Het
Lrp10 C T 14: 54,705,802 (GRCm39) R331C probably benign Het
Map4k5 A T 12: 69,878,332 (GRCm39) D289E probably benign Het
Mfsd4b2 A T 10: 39,799,773 (GRCm39) M43K possibly damaging Het
Msr1 T G 8: 40,076,997 (GRCm39) R138S possibly damaging Het
Myh7b G C 2: 155,474,293 (GRCm39) R1669S possibly damaging Het
Myh9 G A 15: 77,648,723 (GRCm39) A1711V probably benign Het
Myo18b A G 5: 113,023,083 (GRCm39) probably benign Het
Nampt A T 12: 32,883,120 (GRCm39) N102Y possibly damaging Het
Nell2 T C 15: 95,371,460 (GRCm39) I92V probably benign Het
Nes A G 3: 87,884,521 (GRCm39) N883D probably benign Het
Neurl3 T A 1: 36,312,463 (GRCm39) probably benign Het
Ocln T A 13: 100,675,930 (GRCm39) T188S probably benign Het
Or2ag20 T A 7: 106,464,937 (GRCm39) M250K probably damaging Het
Or5m10 T C 2: 85,717,585 (GRCm39) F147S probably benign Het
Parp14 T A 16: 35,664,733 (GRCm39) Q1305L probably benign Het
Pde3a C T 6: 141,433,682 (GRCm39) Q855* probably null Het
Pde4b T C 4: 102,052,311 (GRCm39) probably benign Het
Pdk2 T C 11: 94,930,242 (GRCm39) M65V probably benign Het
Phf21a T C 2: 92,182,201 (GRCm39) S377P probably damaging Het
Plcb2 T A 2: 118,548,703 (GRCm39) T408S probably benign Het
Ppp1r12b G T 1: 134,883,471 (GRCm39) A17E probably benign Het
Ppp6r2 A G 15: 89,167,152 (GRCm39) D789G probably benign Het
Prdm16 T C 4: 154,419,719 (GRCm39) M897V possibly damaging Het
Prss57 A G 10: 79,620,178 (GRCm39) probably null Het
Psd G T 19: 46,310,907 (GRCm39) L381I probably benign Het
Ptprq A T 10: 107,370,540 (GRCm39) D2050E probably benign Het
Rfc1 G T 5: 65,423,505 (GRCm39) N1034K probably damaging Het
Ryr3 C T 2: 112,661,504 (GRCm39) G1829S probably benign Het
Scaper T C 9: 55,767,003 (GRCm39) probably null Het
Scn5a A G 9: 119,351,632 (GRCm39) I783T probably damaging Het
Slc28a1 A G 7: 80,818,796 (GRCm39) N583S possibly damaging Het
Slc35e3 C T 10: 117,580,884 (GRCm39) G140D probably damaging Het
Slc6a9 G A 4: 117,725,347 (GRCm39) probably null Het
Sptlc1 A G 13: 53,496,218 (GRCm39) S376P probably benign Het
Sspo G A 6: 48,441,729 (GRCm39) C1913Y probably damaging Het
Taar7b A T 10: 23,876,845 (GRCm39) I337F possibly damaging Het
Tdpoz2 T A 3: 93,559,235 (GRCm39) I246F probably damaging Het
Trpa1 C T 1: 14,946,183 (GRCm39) V983M probably damaging Het
Trpm5 A T 7: 142,626,521 (GRCm39) M1112K probably benign Het
Tsbp1 G A 17: 34,667,770 (GRCm39) C154Y possibly damaging Het
Uso1 A T 5: 92,340,594 (GRCm39) K670I probably benign Het
Washc4 A G 10: 83,392,771 (GRCm39) D257G probably damaging Het
Wdr41 T A 13: 95,151,725 (GRCm39) probably null Het
Zbtb17 A G 4: 141,193,860 (GRCm39) Q668R possibly damaging Het
Other mutations in Ipo9
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00896:Ipo9 APN 1 135,327,797 (GRCm39) missense probably damaging 1.00
IGL01611:Ipo9 APN 1 135,314,431 (GRCm39) missense possibly damaging 0.76
IGL01941:Ipo9 APN 1 135,335,811 (GRCm39) missense possibly damaging 0.95
IGL01944:Ipo9 APN 1 135,333,624 (GRCm39) missense probably damaging 0.98
IGL01959:Ipo9 APN 1 135,348,093 (GRCm39) critical splice acceptor site probably null
IGL02649:Ipo9 APN 1 135,313,672 (GRCm39) missense possibly damaging 0.92
IGL02697:Ipo9 APN 1 135,318,314 (GRCm39) missense probably benign 0.00
IGL03286:Ipo9 APN 1 135,334,816 (GRCm39) intron probably benign
FR4304:Ipo9 UTSW 1 135,314,017 (GRCm39) nonsense probably null
FR4304:Ipo9 UTSW 1 135,314,013 (GRCm39) small insertion probably benign
FR4340:Ipo9 UTSW 1 135,314,009 (GRCm39) small insertion probably benign
FR4340:Ipo9 UTSW 1 135,314,007 (GRCm39) small insertion probably benign
FR4548:Ipo9 UTSW 1 135,314,013 (GRCm39) small insertion probably benign
FR4589:Ipo9 UTSW 1 135,314,019 (GRCm39) small insertion probably benign
FR4589:Ipo9 UTSW 1 135,314,004 (GRCm39) small insertion probably benign
FR4976:Ipo9 UTSW 1 135,314,019 (GRCm39) small insertion probably benign
R0111:Ipo9 UTSW 1 135,333,662 (GRCm39) missense probably damaging 0.97
R0238:Ipo9 UTSW 1 135,332,074 (GRCm39) splice site probably benign
R0239:Ipo9 UTSW 1 135,332,074 (GRCm39) splice site probably benign
R0279:Ipo9 UTSW 1 135,348,101 (GRCm39) intron probably benign
R0704:Ipo9 UTSW 1 135,314,006 (GRCm39) small deletion probably benign
R1070:Ipo9 UTSW 1 135,334,281 (GRCm39) missense possibly damaging 0.89
R1282:Ipo9 UTSW 1 135,330,030 (GRCm39) missense possibly damaging 0.48
R1467:Ipo9 UTSW 1 135,334,281 (GRCm39) missense possibly damaging 0.89
R1467:Ipo9 UTSW 1 135,334,281 (GRCm39) missense possibly damaging 0.89
R1728:Ipo9 UTSW 1 135,329,988 (GRCm39) missense probably benign
R1728:Ipo9 UTSW 1 135,314,009 (GRCm39) small insertion probably benign
R1728:Ipo9 UTSW 1 135,314,006 (GRCm39) small insertion probably benign
R1729:Ipo9 UTSW 1 135,329,988 (GRCm39) missense probably benign
R1729:Ipo9 UTSW 1 135,314,006 (GRCm39) small insertion probably benign
R1730:Ipo9 UTSW 1 135,329,988 (GRCm39) missense probably benign
R1730:Ipo9 UTSW 1 135,314,006 (GRCm39) small insertion probably benign
R1739:Ipo9 UTSW 1 135,329,988 (GRCm39) missense probably benign
R1739:Ipo9 UTSW 1 135,314,006 (GRCm39) small insertion probably benign
R1762:Ipo9 UTSW 1 135,314,006 (GRCm39) small insertion probably benign
R1762:Ipo9 UTSW 1 135,329,988 (GRCm39) missense probably benign
R1783:Ipo9 UTSW 1 135,314,006 (GRCm39) small insertion probably benign
R1783:Ipo9 UTSW 1 135,329,988 (GRCm39) missense probably benign
R1784:Ipo9 UTSW 1 135,314,006 (GRCm39) small insertion probably benign
R1784:Ipo9 UTSW 1 135,329,988 (GRCm39) missense probably benign
R1785:Ipo9 UTSW 1 135,314,006 (GRCm39) small insertion probably benign
R1785:Ipo9 UTSW 1 135,314,019 (GRCm39) small insertion probably benign
R1785:Ipo9 UTSW 1 135,329,988 (GRCm39) missense probably benign
R1899:Ipo9 UTSW 1 135,327,884 (GRCm39) missense probably damaging 0.99
R2049:Ipo9 UTSW 1 135,314,006 (GRCm39) small insertion probably benign
R2049:Ipo9 UTSW 1 135,329,988 (GRCm39) missense probably benign
R2130:Ipo9 UTSW 1 135,314,006 (GRCm39) small insertion probably benign
R2130:Ipo9 UTSW 1 135,329,988 (GRCm39) missense probably benign
R2131:Ipo9 UTSW 1 135,314,006 (GRCm39) small insertion probably benign
R2131:Ipo9 UTSW 1 135,329,988 (GRCm39) missense probably benign
R2133:Ipo9 UTSW 1 135,314,006 (GRCm39) small insertion probably benign
R2133:Ipo9 UTSW 1 135,314,013 (GRCm39) small insertion probably benign
R2133:Ipo9 UTSW 1 135,329,988 (GRCm39) missense probably benign
R2136:Ipo9 UTSW 1 135,322,023 (GRCm39) missense probably damaging 0.98
R2141:Ipo9 UTSW 1 135,329,988 (GRCm39) missense probably benign
R2141:Ipo9 UTSW 1 135,314,006 (GRCm39) small insertion probably benign
R2142:Ipo9 UTSW 1 135,314,020 (GRCm39) small insertion probably benign
R2142:Ipo9 UTSW 1 135,329,988 (GRCm39) missense probably benign
R2142:Ipo9 UTSW 1 135,314,006 (GRCm39) small insertion probably benign
R2142:Ipo9 UTSW 1 135,314,013 (GRCm39) small insertion probably benign
R2356:Ipo9 UTSW 1 135,334,555 (GRCm39) missense probably benign 0.00
R2923:Ipo9 UTSW 1 135,327,867 (GRCm39) missense probably benign 0.25
R3161:Ipo9 UTSW 1 135,337,214 (GRCm39) missense probably benign 0.43
R3162:Ipo9 UTSW 1 135,337,214 (GRCm39) missense probably benign 0.43
R3162:Ipo9 UTSW 1 135,337,214 (GRCm39) missense probably benign 0.43
R4086:Ipo9 UTSW 1 135,316,428 (GRCm39) unclassified probably benign
R4679:Ipo9 UTSW 1 135,321,907 (GRCm39) missense probably benign
R4816:Ipo9 UTSW 1 135,334,288 (GRCm39) missense probably benign 0.21
R4956:Ipo9 UTSW 1 135,331,960 (GRCm39) critical splice donor site probably null
R5052:Ipo9 UTSW 1 135,316,349 (GRCm39) splice site probably null
R5230:Ipo9 UTSW 1 135,347,808 (GRCm39) missense probably damaging 1.00
R5240:Ipo9 UTSW 1 135,317,344 (GRCm39) unclassified probably benign
R5257:Ipo9 UTSW 1 135,313,173 (GRCm39) missense probably damaging 1.00
R5340:Ipo9 UTSW 1 135,313,170 (GRCm39) missense probably benign 0.00
R5560:Ipo9 UTSW 1 135,329,983 (GRCm39) missense probably damaging 0.99
R5602:Ipo9 UTSW 1 135,329,983 (GRCm39) missense probably damaging 0.99
R5604:Ipo9 UTSW 1 135,329,983 (GRCm39) missense probably damaging 0.99
R5654:Ipo9 UTSW 1 135,313,210 (GRCm39) nonsense probably null
R6018:Ipo9 UTSW 1 135,318,274 (GRCm39) critical splice donor site probably null
R6128:Ipo9 UTSW 1 135,318,311 (GRCm39) missense possibly damaging 0.90
R6841:Ipo9 UTSW 1 135,314,046 (GRCm39) missense probably benign
R7230:Ipo9 UTSW 1 135,334,496 (GRCm39) critical splice donor site probably benign
R7255:Ipo9 UTSW 1 135,313,726 (GRCm39) missense probably benign 0.01
R7383:Ipo9 UTSW 1 135,316,411 (GRCm39) missense probably damaging 1.00
R7844:Ipo9 UTSW 1 135,322,062 (GRCm39) missense probably benign 0.00
R7889:Ipo9 UTSW 1 135,334,591 (GRCm39) missense probably benign 0.22
R8125:Ipo9 UTSW 1 135,331,078 (GRCm39) missense probably benign 0.00
R8823:Ipo9 UTSW 1 135,347,077 (GRCm39) missense probably damaging 0.99
R8889:Ipo9 UTSW 1 135,314,544 (GRCm39) missense possibly damaging 0.50
R8892:Ipo9 UTSW 1 135,314,544 (GRCm39) missense possibly damaging 0.50
R8906:Ipo9 UTSW 1 135,321,951 (GRCm39) missense probably damaging 1.00
R8926:Ipo9 UTSW 1 135,313,952 (GRCm39) splice site probably benign
R9084:Ipo9 UTSW 1 135,334,563 (GRCm39) missense probably benign 0.01
R9215:Ipo9 UTSW 1 135,347,033 (GRCm39) missense probably benign 0.05
R9756:Ipo9 UTSW 1 135,314,057 (GRCm39) missense probably benign 0.00
Y5405:Ipo9 UTSW 1 135,314,022 (GRCm39) small insertion probably benign
Y5405:Ipo9 UTSW 1 135,314,013 (GRCm39) small insertion probably benign
Y5405:Ipo9 UTSW 1 135,314,007 (GRCm39) small insertion probably benign
Predicted Primers PCR Primer
(F):5'- CTGGCTTATGATGTGCATAAATCAC -3'
(R):5'- AGTGCTCCCACATGATAGATGATTG -3'

Sequencing Primer
(F):5'- AGTGAGTTAACATCAGGTCCC -3'
(R):5'- GGAATACTCTGAGGGATCTTAC -3'
Posted On 2016-06-06