Incidental Mutation 'R5058:Vmn2r79'
ID 391018
Institutional Source Beutler Lab
Gene Symbol Vmn2r79
Ensembl Gene ENSMUSG00000090362
Gene Name vomeronasal 2, receptor 79
Synonyms EG621430
MMRRC Submission 042648-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.093) question?
Stock # R5058 (G1)
Quality Score 225
Status Validated
Chromosome 7
Chromosomal Location 86645673-86687176 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 86651423 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Leucine to Proline at position 274 (L274P)
Ref Sequence ENSEMBL: ENSMUSP00000132478 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000164462]
AlphaFold E9Q067
Predicted Effect probably damaging
Transcript: ENSMUST00000164462
AA Change: L274P

PolyPhen 2 Score 0.979 (Sensitivity: 0.75; Specificity: 0.96)
SMART Domains Protein: ENSMUSP00000132478
Gene: ENSMUSG00000090362
AA Change: L274P

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Pfam:ANF_receptor 75 464 1.9e-31 PFAM
Pfam:NCD3G 506 559 3.1e-21 PFAM
Pfam:7tm_3 592 827 2.8e-53 PFAM
Meta Mutation Damage Score 0.6467 question?
Coding Region Coverage
  • 1x: 99.1%
  • 3x: 98.3%
  • 10x: 96.3%
  • 20x: 92.2%
Validation Efficiency 100% (79/79)
Allele List at MGI
Other mutations in this stock
Total: 65 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adprhl1 T C 8: 13,292,625 (GRCm39) Y222C probably damaging Het
Adprs A G 4: 126,212,238 (GRCm39) S94P probably damaging Het
Atp11b A G 3: 35,863,510 (GRCm39) E202G probably benign Het
Cacna1d G T 14: 29,836,201 (GRCm39) S849* probably null Het
Camsap1 T C 2: 25,829,375 (GRCm39) D783G probably benign Het
Cbfa2t2 T A 2: 154,346,665 (GRCm39) I124N probably damaging Het
Ccdc13 A T 9: 121,646,613 (GRCm39) probably benign Het
Cfap44 G A 16: 44,240,567 (GRCm39) probably null Het
Col17a1 C A 19: 47,673,989 (GRCm39) E13* probably null Het
Cybb C G X: 9,316,989 (GRCm39) D246H probably benign Het
Dennd6b A G 15: 89,071,553 (GRCm39) L288P possibly damaging Het
Dhx37 A C 5: 125,499,295 (GRCm39) Y638D probably benign Het
Epb41 G A 4: 131,734,746 (GRCm39) probably benign Het
Esp31 A T 17: 38,955,500 (GRCm39) I48L possibly damaging Het
Fat3 T C 9: 15,908,154 (GRCm39) Q2616R probably damaging Het
Fbxo33 A G 12: 59,265,919 (GRCm39) I116T probably benign Het
Flnb G T 14: 7,924,262 (GRCm38) E1792* probably null Het
Fzd2 G A 11: 102,495,633 (GRCm39) G26R probably damaging Het
Gm11677 T A 11: 111,616,264 (GRCm39) noncoding transcript Het
Gm7137 A T 10: 77,623,905 (GRCm39) probably benign Het
Hnrnpr A G 4: 136,063,648 (GRCm39) T252A possibly damaging Het
Hyal5 T C 6: 24,891,484 (GRCm39) F433L probably damaging Het
Kcnmb4 T A 10: 116,299,833 (GRCm39) probably benign Het
Meltf A G 16: 31,706,421 (GRCm39) probably null Het
Mllt6 G A 11: 97,560,326 (GRCm39) S210N possibly damaging Het
Muc6 T C 7: 141,230,491 (GRCm39) D1213G probably benign Het
Ncam1 A C 9: 49,709,995 (GRCm39) F12C probably benign Het
Nfxl1 A T 5: 72,713,582 (GRCm39) D120E probably benign Het
Nrg1 T C 8: 32,314,587 (GRCm39) Q142R probably damaging Het
Or10c1 A G 17: 37,522,558 (GRCm39) L62P probably damaging Het
Or1j18 T G 2: 36,625,011 (GRCm39) L226R possibly damaging Het
Or2h15 G A 17: 38,441,432 (GRCm39) S217F probably damaging Het
Or56a4 T C 7: 104,806,355 (GRCm39) N178S probably damaging Het
Or5k16 T C 16: 58,736,435 (GRCm39) T190A probably benign Het
Or8c10 C A 9: 38,279,220 (GRCm39) T116K probably damaging Het
Or8g30 C A 9: 39,229,960 (GRCm39) V317L probably benign Het
Or9s18 C A 13: 65,300,743 (GRCm39) A235D possibly damaging Het
Padi2 G T 4: 140,659,432 (GRCm39) V246L probably benign Het
Pgghg C T 7: 140,522,455 (GRCm39) T63I possibly damaging Het
Pitpnm1 A G 19: 4,162,758 (GRCm39) N1117S probably benign Het
Plch1 G T 3: 63,630,202 (GRCm39) T534K probably damaging Het
Poc1a G T 9: 106,227,012 (GRCm39) probably benign Het
Polr3c T C 3: 96,630,833 (GRCm39) I196V probably benign Het
Prph A T 15: 98,953,113 (GRCm39) probably benign Het
Ptprg C A 14: 12,037,387 (GRCm38) T189K possibly damaging Het
R3hcc1 A T 14: 69,941,463 (GRCm39) I183N probably damaging Het
Rundc1 T C 11: 101,316,363 (GRCm39) L145P probably benign Het
Slc26a3 A G 12: 31,520,964 (GRCm39) K723E possibly damaging Het
Slc38a3 T C 9: 107,536,390 (GRCm39) E2G possibly damaging Het
Slc9a5 G T 8: 106,082,490 (GRCm39) V252L probably benign Het
Smim26 C T 2: 144,437,043 (GRCm39) T64M probably benign Het
Socs4 C T 14: 47,527,589 (GRCm39) R175* probably null Het
Srebf2 T C 15: 82,066,251 (GRCm39) S600P probably damaging Het
Tas2r107 A T 6: 131,636,705 (GRCm39) S115T probably damaging Het
Tenm2 T C 11: 36,097,907 (GRCm39) D447G possibly damaging Het
Thbs2 T A 17: 14,896,591 (GRCm39) D766V probably damaging Het
Tinagl1 A G 4: 130,061,250 (GRCm39) V300A probably benign Het
Tle6 T A 10: 81,430,072 (GRCm39) N332I possibly damaging Het
Tle6 C A 10: 81,431,791 (GRCm39) W151L probably damaging Het
Tnfrsf13c C T 15: 82,108,408 (GRCm39) V36M probably damaging Het
Tns2 T C 15: 102,016,295 (GRCm39) I211T possibly damaging Het
Trp63 A G 16: 25,701,344 (GRCm39) N379D probably damaging Het
Trpc2 T C 7: 101,738,316 (GRCm39) W433R probably damaging Het
Tyw1 T A 5: 130,305,927 (GRCm39) L350Q probably benign Het
Usf3 T C 16: 44,033,070 (GRCm39) L76P probably damaging Het
Other mutations in Vmn2r79
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01401:Vmn2r79 APN 7 86,686,481 (GRCm39) missense probably benign 0.01
IGL01675:Vmn2r79 APN 7 86,645,856 (GRCm39) missense probably benign 0.01
IGL01760:Vmn2r79 APN 7 86,651,366 (GRCm39) missense probably benign
IGL01834:Vmn2r79 APN 7 86,686,354 (GRCm39) missense probably benign 0.01
IGL01843:Vmn2r79 APN 7 86,686,485 (GRCm39) missense probably damaging 1.00
IGL01914:Vmn2r79 APN 7 86,686,571 (GRCm39) missense probably benign 0.14
IGL01980:Vmn2r79 APN 7 86,686,290 (GRCm39) missense possibly damaging 0.49
IGL02438:Vmn2r79 APN 7 86,651,744 (GRCm39) missense probably damaging 0.98
IGL02740:Vmn2r79 APN 7 86,653,366 (GRCm39) missense probably benign 0.00
IGL03052:Vmn2r79 UTSW 7 86,652,799 (GRCm39) missense probably benign 0.00
PIT4445001:Vmn2r79 UTSW 7 86,651,408 (GRCm39) missense possibly damaging 0.46
R0096:Vmn2r79 UTSW 7 86,686,527 (GRCm39) missense probably damaging 1.00
R0096:Vmn2r79 UTSW 7 86,686,527 (GRCm39) missense probably damaging 1.00
R0270:Vmn2r79 UTSW 7 86,652,594 (GRCm39) missense probably benign 0.00
R0336:Vmn2r79 UTSW 7 86,651,287 (GRCm39) missense probably benign 0.15
R0418:Vmn2r79 UTSW 7 86,651,611 (GRCm39) missense probably benign 0.18
R1070:Vmn2r79 UTSW 7 86,652,681 (GRCm39) missense probably damaging 1.00
R1234:Vmn2r79 UTSW 7 86,653,307 (GRCm39) missense possibly damaging 0.71
R1459:Vmn2r79 UTSW 7 86,687,002 (GRCm39) missense probably benign 0.01
R1513:Vmn2r79 UTSW 7 86,686,652 (GRCm39) missense probably benign 0.01
R1624:Vmn2r79 UTSW 7 86,653,247 (GRCm39) critical splice acceptor site probably null
R1633:Vmn2r79 UTSW 7 86,687,042 (GRCm39) missense possibly damaging 0.52
R1676:Vmn2r79 UTSW 7 86,651,839 (GRCm39) missense probably benign
R1781:Vmn2r79 UTSW 7 86,651,555 (GRCm39) missense probably benign 0.00
R1794:Vmn2r79 UTSW 7 86,650,621 (GRCm39) missense probably benign 0.37
R1823:Vmn2r79 UTSW 7 86,687,080 (GRCm39) missense probably damaging 1.00
R2013:Vmn2r79 UTSW 7 86,653,289 (GRCm39) missense possibly damaging 0.50
R2018:Vmn2r79 UTSW 7 86,651,634 (GRCm39) missense probably benign 0.07
R2019:Vmn2r79 UTSW 7 86,651,634 (GRCm39) missense probably benign 0.07
R2177:Vmn2r79 UTSW 7 86,645,839 (GRCm39) missense possibly damaging 0.94
R2984:Vmn2r79 UTSW 7 86,651,099 (GRCm39) missense possibly damaging 0.85
R3719:Vmn2r79 UTSW 7 86,651,245 (GRCm39) missense probably benign 0.05
R3798:Vmn2r79 UTSW 7 86,651,402 (GRCm39) missense possibly damaging 0.88
R3969:Vmn2r79 UTSW 7 86,652,801 (GRCm39) missense probably damaging 1.00
R4182:Vmn2r79 UTSW 7 86,651,099 (GRCm39) missense possibly damaging 0.85
R4183:Vmn2r79 UTSW 7 86,651,099 (GRCm39) missense possibly damaging 0.85
R4245:Vmn2r79 UTSW 7 86,651,624 (GRCm39) missense possibly damaging 0.73
R4301:Vmn2r79 UTSW 7 86,651,099 (GRCm39) missense possibly damaging 0.85
R4391:Vmn2r79 UTSW 7 86,651,099 (GRCm39) missense possibly damaging 0.85
R4393:Vmn2r79 UTSW 7 86,651,099 (GRCm39) missense possibly damaging 0.85
R4394:Vmn2r79 UTSW 7 86,651,099 (GRCm39) missense possibly damaging 0.85
R4396:Vmn2r79 UTSW 7 86,651,099 (GRCm39) missense possibly damaging 0.85
R4397:Vmn2r79 UTSW 7 86,651,099 (GRCm39) missense possibly damaging 0.85
R4592:Vmn2r79 UTSW 7 86,653,319 (GRCm39) missense possibly damaging 0.86
R4697:Vmn2r79 UTSW 7 86,687,168 (GRCm39) missense probably damaging 0.98
R4897:Vmn2r79 UTSW 7 86,650,675 (GRCm39) missense probably benign
R5016:Vmn2r79 UTSW 7 86,686,548 (GRCm39) missense probably benign 0.00
R5177:Vmn2r79 UTSW 7 86,651,177 (GRCm39) missense probably damaging 0.97
R6078:Vmn2r79 UTSW 7 86,653,319 (GRCm39) missense possibly damaging 0.86
R6079:Vmn2r79 UTSW 7 86,653,319 (GRCm39) missense possibly damaging 0.86
R6138:Vmn2r79 UTSW 7 86,653,319 (GRCm39) missense possibly damaging 0.86
R6257:Vmn2r79 UTSW 7 86,651,778 (GRCm39) missense probably benign 0.27
R6260:Vmn2r79 UTSW 7 86,686,365 (GRCm39) missense probably benign 0.00
R6307:Vmn2r79 UTSW 7 86,686,976 (GRCm39) missense probably damaging 1.00
R6323:Vmn2r79 UTSW 7 86,650,522 (GRCm39) missense probably benign 0.05
R6374:Vmn2r79 UTSW 7 86,651,498 (GRCm39) missense probably benign 0.02
R6530:Vmn2r79 UTSW 7 86,651,252 (GRCm39) missense possibly damaging 0.91
R6546:Vmn2r79 UTSW 7 86,652,741 (GRCm39) missense probably benign 0.01
R6682:Vmn2r79 UTSW 7 86,653,370 (GRCm39) missense possibly damaging 0.69
R6858:Vmn2r79 UTSW 7 86,686,580 (GRCm39) missense probably benign
R6965:Vmn2r79 UTSW 7 86,651,100 (GRCm39) missense probably benign 0.10
R7130:Vmn2r79 UTSW 7 86,651,474 (GRCm39) missense probably damaging 0.99
R7156:Vmn2r79 UTSW 7 86,686,851 (GRCm39) missense probably damaging 0.98
R7604:Vmn2r79 UTSW 7 86,652,592 (GRCm39) critical splice acceptor site probably null
R7691:Vmn2r79 UTSW 7 86,687,111 (GRCm39) missense probably damaging 0.96
R8055:Vmn2r79 UTSW 7 86,686,541 (GRCm39) missense possibly damaging 0.94
R8070:Vmn2r79 UTSW 7 86,651,336 (GRCm39) missense probably benign
R8073:Vmn2r79 UTSW 7 86,651,462 (GRCm39) missense probably benign 0.00
R8145:Vmn2r79 UTSW 7 86,686,862 (GRCm39) missense probably benign 0.02
R8263:Vmn2r79 UTSW 7 86,686,726 (GRCm39) missense possibly damaging 0.89
R8350:Vmn2r79 UTSW 7 86,686,741 (GRCm39) nonsense probably null
R8400:Vmn2r79 UTSW 7 86,651,308 (GRCm39) missense probably benign 0.00
R8814:Vmn2r79 UTSW 7 86,651,714 (GRCm39) missense probably benign 0.00
R8862:Vmn2r79 UTSW 7 86,645,712 (GRCm39) missense probably benign 0.23
R9146:Vmn2r79 UTSW 7 86,650,681 (GRCm39) nonsense probably null
R9276:Vmn2r79 UTSW 7 86,687,045 (GRCm39) missense probably damaging 1.00
R9361:Vmn2r79 UTSW 7 86,652,822 (GRCm39) critical splice donor site probably null
R9676:Vmn2r79 UTSW 7 86,686,452 (GRCm39) missense probably damaging 1.00
U15987:Vmn2r79 UTSW 7 86,653,319 (GRCm39) missense possibly damaging 0.86
X0054:Vmn2r79 UTSW 7 86,653,270 (GRCm39) missense probably benign 0.01
Z1088:Vmn2r79 UTSW 7 86,651,549 (GRCm39) missense probably damaging 1.00
Z1176:Vmn2r79 UTSW 7 86,686,377 (GRCm39) missense probably benign
Z1176:Vmn2r79 UTSW 7 86,651,526 (GRCm39) missense probably benign 0.00
Predicted Primers PCR Primer
(F):5'- GTTCCTTTCTGAATTGAGAGCAG -3'
(R):5'- GTCCACCACAGTTTAGCCAATG -3'

Sequencing Primer
(F):5'- CCTTTCTGAATTGAGAGCAGGAATG -3'
(R):5'- CCACAGTTTAGCCAATGAAATGTC -3'
Posted On 2016-06-06