Incidental Mutation 'IGL00324:Pnldc1'
ID 3926
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Pnldc1
Ensembl Gene ENSMUSG00000073460
Gene Name poly(A)-specific ribonuclease (PARN)-like domain containing 1
Synonyms LOC240023
Accession Numbers
Essential gene? Probably non essential (E-score: 0.151) question?
Stock # IGL00324
Quality Score
Status
Chromosome 17
Chromosomal Location 13107616-13129117 bp(-) (GRCm39)
Type of Mutation splice site
DNA Base Change (assembly) A to T at 13124645 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000129377 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000163394]
AlphaFold B2RXZ1
Predicted Effect probably benign
Transcript: ENSMUST00000163394
SMART Domains Protein: ENSMUSP00000129377
Gene: ENSMUSG00000073460

DomainStartEndE-ValueType
Pfam:CAF1 3 373 1e-75 PFAM
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 30 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abcd3 T C 3: 121,570,642 (GRCm39) probably benign Het
Cdk12 T A 11: 98,136,214 (GRCm39) L1156Q unknown Het
Ctsl T C 13: 64,515,982 (GRCm39) Y66C probably damaging Het
Esd C T 14: 74,973,467 (GRCm39) H21Y probably damaging Het
Fcrlb A C 1: 170,736,393 (GRCm39) Y128D possibly damaging Het
Gm17027 A T 14: 41,981,267 (GRCm39) N196K unknown Het
Gm4553 T C 7: 141,718,964 (GRCm39) S155G unknown Het
Hpcal1 A G 12: 17,841,146 (GRCm39) S175G probably benign Het
Itgam A T 7: 127,684,833 (GRCm39) D401V probably damaging Het
Kank1 A G 19: 25,389,122 (GRCm39) T932A probably benign Het
Lmod1 A G 1: 135,292,216 (GRCm39) K357R probably benign Het
Muc4 A G 16: 32,599,186 (GRCm39) I3271V probably benign Het
Nlrc5 A G 8: 95,248,107 (GRCm39) K1692E probably damaging Het
Ocln A G 13: 100,671,521 (GRCm39) W279R probably damaging Het
Or4p20 T C 2: 88,254,130 (GRCm39) I80V probably benign Het
Pcsk1 A G 13: 75,280,206 (GRCm39) K677R probably benign Het
Pitrm1 T A 13: 6,618,702 (GRCm39) L586Q probably damaging Het
Plppr3 G A 10: 79,702,503 (GRCm39) S217L probably damaging Het
Pramel12 T A 4: 143,143,237 (GRCm39) M1K probably null Het
Pramel13 A G 4: 144,121,310 (GRCm39) L238P possibly damaging Het
Sema6b C T 17: 56,437,048 (GRCm39) D204N probably damaging Het
Slc12a5 A G 2: 164,839,041 (GRCm39) N1063S probably damaging Het
Tg T C 15: 66,565,273 (GRCm39) V1205A probably benign Het
Tmem260 T C 14: 48,724,336 (GRCm39) F205L probably benign Het
Trappc11 A T 8: 47,956,337 (GRCm39) probably benign Het
Tsen34 A G 7: 3,703,530 (GRCm39) *296W probably null Het
Ubr2 A G 17: 47,296,986 (GRCm39) probably benign Het
Vmn2r23 T A 6: 123,706,684 (GRCm39) W505R possibly damaging Het
Wbp11 A G 6: 136,798,668 (GRCm39) probably benign Het
Znfx1 A T 2: 166,878,649 (GRCm39) M1909K possibly damaging Het
Other mutations in Pnldc1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01599:Pnldc1 APN 17 13,125,415 (GRCm39) missense probably benign 0.18
IGL02109:Pnldc1 APN 17 13,124,425 (GRCm39) missense probably benign 0.01
R0022:Pnldc1 UTSW 17 13,109,006 (GRCm39) missense probably damaging 1.00
R0423:Pnldc1 UTSW 17 13,108,963 (GRCm39) missense possibly damaging 0.51
R1921:Pnldc1 UTSW 17 13,107,815 (GRCm39) missense possibly damaging 0.94
R1978:Pnldc1 UTSW 17 13,125,392 (GRCm39) missense possibly damaging 0.88
R2403:Pnldc1 UTSW 17 13,118,777 (GRCm39) missense probably damaging 1.00
R4027:Pnldc1 UTSW 17 13,109,666 (GRCm39) missense probably benign 0.01
R4574:Pnldc1 UTSW 17 13,111,669 (GRCm39) missense probably benign 0.01
R5148:Pnldc1 UTSW 17 13,111,676 (GRCm39) missense probably benign 0.00
R5381:Pnldc1 UTSW 17 13,109,283 (GRCm39) missense probably benign 0.07
R5973:Pnldc1 UTSW 17 13,113,260 (GRCm39) missense probably benign 0.07
R6073:Pnldc1 UTSW 17 13,109,250 (GRCm39) missense probably null 0.05
R6368:Pnldc1 UTSW 17 13,124,751 (GRCm39) missense probably damaging 1.00
R6551:Pnldc1 UTSW 17 13,124,456 (GRCm39) missense probably damaging 0.98
R7909:Pnldc1 UTSW 17 13,122,098 (GRCm39) missense probably benign 0.04
R8088:Pnldc1 UTSW 17 13,116,189 (GRCm39) missense probably damaging 1.00
R8724:Pnldc1 UTSW 17 13,111,703 (GRCm39) missense probably damaging 0.96
R8728:Pnldc1 UTSW 17 13,116,165 (GRCm39) missense probably damaging 1.00
Posted On 2012-04-20