Incidental Mutation 'R5114:Vmn2r61'
ID 394084
Institutional Source Beutler Lab
Gene Symbol Vmn2r61
Ensembl Gene ENSMUSG00000090967
Gene Name vomeronasal 2, receptor 61
Synonyms Gprc2a-rs2, Casr-rs2, EG637873
MMRRC Submission 042702-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.099) question?
Stock # R5114 (G1)
Quality Score 225
Status Not validated
Chromosome 7
Chromosomal Location 41909477-41950179 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 41949953 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Phenylalanine to Serine at position 791 (F791S)
Ref Sequence ENSEMBL: ENSMUSP00000129576 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000166131]
AlphaFold L7N2B8
Predicted Effect possibly damaging
Transcript: ENSMUST00000166131
AA Change: F791S

PolyPhen 2 Score 0.921 (Sensitivity: 0.81; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000129576
Gene: ENSMUSG00000090967
AA Change: F791S

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Pfam:ANF_receptor 77 471 4e-42 PFAM
Pfam:NCD3G 514 567 1.9e-21 PFAM
Pfam:7tm_3 600 835 6.2e-52 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000173044
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.5%
  • 10x: 96.8%
  • 20x: 93.9%
Validation Efficiency 99% (93/94)
Allele List at MGI
Other mutations in this stock
Total: 88 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
5830454E08Rik T A 9: 120,406,693 (GRCm39) probably benign Het
Ada G A 2: 163,572,406 (GRCm39) R225C probably benign Het
Adamts9 T C 6: 92,867,254 (GRCm39) K625R probably benign Het
Ano1 T C 7: 144,210,820 (GRCm39) I182V possibly damaging Het
Aoc1l2 A T 6: 48,908,292 (GRCm39) M431L probably benign Het
Aox4 T C 1: 58,285,445 (GRCm39) V643A possibly damaging Het
Arcn1 T C 9: 44,671,441 (GRCm39) I29V probably benign Het
Arhgap15 A G 2: 43,670,630 (GRCm39) T5A probably benign Het
Asb10 A T 5: 24,745,740 (GRCm39) L62Q probably damaging Het
Atp23 T A 10: 126,723,403 (GRCm39) H233L possibly damaging Het
Bglap2 C T 3: 88,289,432 (GRCm39) probably benign Het
Carnmt1 T C 19: 18,655,098 (GRCm39) S84P probably damaging Het
Ccdc152 A G 15: 3,312,319 (GRCm39) I180T probably damaging Het
Cdr2l T C 11: 115,284,186 (GRCm39) F174S probably damaging Het
Celsr2 C T 3: 108,301,312 (GRCm39) V2695I probably benign Het
Chd1 C A 17: 15,948,460 (GRCm39) S127R probably benign Het
Chmp4c T A 3: 10,450,646 (GRCm39) F75L probably benign Het
Col13a1 A C 10: 61,725,880 (GRCm39) V260G possibly damaging Het
Col5a1 A G 2: 27,915,664 (GRCm39) N183D probably damaging Het
Cpn1 C T 19: 43,974,634 (GRCm39) V32M probably damaging Het
Cxcl1 A G 5: 91,039,373 (GRCm39) M39V probably benign Het
Dpep2 T A 8: 106,712,825 (GRCm39) D455V probably damaging Het
Dpp7 G A 2: 25,242,749 (GRCm39) T441I possibly damaging Het
Dst C A 1: 34,241,640 (GRCm39) H4001N probably damaging Het
Epg5 G A 18: 78,038,828 (GRCm39) A1519T probably benign Het
Esrp2 C T 8: 106,858,820 (GRCm39) V606I probably benign Het
Fbxo40 T C 16: 36,789,236 (GRCm39) K625E probably damaging Het
Gbp2b A T 3: 142,303,946 (GRCm39) I14F probably damaging Het
Gpr37l1 G T 1: 135,094,676 (GRCm39) F189L probably damaging Het
Heatr5a G A 12: 52,003,020 (GRCm39) Q161* probably null Het
Hspa4l T C 3: 40,700,197 (GRCm39) Y30H possibly damaging Het
Hspg2 G A 4: 137,239,237 (GRCm39) C388Y probably damaging Het
Kcna1 A G 6: 126,619,330 (GRCm39) I330T probably damaging Het
Klhl3 T A 13: 58,166,781 (GRCm39) Y350F probably benign Het
Kntc1 T C 5: 123,919,118 (GRCm39) probably null Het
Krtap10-4 A T 10: 77,662,520 (GRCm39) C109* probably null Het
Lrch4 T C 5: 137,636,179 (GRCm39) S377P probably benign Het
Lrrc8c C A 5: 105,755,349 (GRCm39) H375N probably damaging Het
Lsg1 T C 16: 30,380,538 (GRCm39) E633G probably damaging Het
Mcoln1 T C 8: 3,560,697 (GRCm39) probably benign Het
Med12l C A 3: 59,167,109 (GRCm39) T1523K possibly damaging Het
Mrps27 A T 13: 99,547,973 (GRCm39) probably benign Het
Mzb1 T A 18: 35,780,717 (GRCm39) Y158F probably benign Het
Nat8l T A 5: 34,155,823 (GRCm39) C160S probably damaging Het
Ncf4 T C 15: 78,146,593 (GRCm39) probably benign Het
Or1b1 A T 2: 36,994,814 (GRCm39) Y283N probably damaging Het
Or1o3 T C 17: 37,573,730 (GRCm39) Y275C probably damaging Het
Pak2 T A 16: 31,861,936 (GRCm39) probably benign Het
Pcdhga12 T C 18: 37,901,160 (GRCm39) I664T probably benign Het
Pcnx2 A C 8: 126,564,749 (GRCm39) L1048R possibly damaging Het
Pcsk5 T C 19: 17,652,949 (GRCm39) M246V probably damaging Het
Pkd2l2 T A 18: 34,566,355 (GRCm39) V522D probably benign Het
Plekhh1 A T 12: 79,115,880 (GRCm39) M808L probably benign Het
Plpp2 C A 10: 79,362,973 (GRCm39) R157L probably benign Het
Plrg1 T A 3: 82,978,558 (GRCm39) H441Q probably benign Het
Pnpla6 T C 8: 3,572,613 (GRCm39) V300A probably damaging Het
Ptprb A T 10: 116,184,088 (GRCm39) K1633N possibly damaging Het
Ralgapa1 A G 12: 55,659,508 (GRCm39) V2004A possibly damaging Het
Rasd1 G T 11: 59,854,933 (GRCm39) S182R possibly damaging Het
Rc3h2 A T 2: 37,288,373 (GRCm39) probably null Het
Rrp1b T A 17: 32,255,445 (GRCm39) probably benign Het
Ruvbl1 T C 6: 88,474,272 (GRCm39) I425T probably benign Het
Shisal1 T C 15: 84,301,427 (GRCm39) D72G probably damaging Het
Sipa1l1 C T 12: 82,487,682 (GRCm39) A1652V probably benign Het
Slc12a2 A G 18: 58,032,344 (GRCm39) Y348C probably damaging Het
Slc14a2 C A 18: 78,238,963 (GRCm39) V219L possibly damaging Het
Smc1b G T 15: 84,949,185 (GRCm39) P1242Q probably damaging Het
Smim33 A G 18: 35,861,894 (GRCm39) Y126C probably damaging Het
Snx27 T A 3: 94,431,551 (GRCm39) D281V probably damaging Het
Spem2 C T 11: 69,707,973 (GRCm39) V331I probably benign Het
Sptb C A 12: 76,656,052 (GRCm39) K1343N probably damaging Het
Sult2a8 T C 7: 14,147,584 (GRCm39) I236V probably benign Het
Syk A G 13: 52,765,071 (GRCm39) E66G probably damaging Het
Synm T A 7: 67,385,406 (GRCm39) E310V probably damaging Het
Tas2r118 G A 6: 23,969,209 (GRCm39) A284V probably benign Het
Thoc2l T A 5: 104,667,742 (GRCm39) F755I probably damaging Het
Tlr11 A G 14: 50,600,578 (GRCm39) N855D possibly damaging Het
Tmem230 G T 2: 132,087,871 (GRCm39) probably benign Het
Trappc8 G A 18: 20,977,237 (GRCm39) T844I probably benign Het
Trmt44 T C 5: 35,722,812 (GRCm39) S419G possibly damaging Het
Trpv1 T A 11: 73,132,574 (GRCm39) V396E probably damaging Het
Ttn A T 2: 76,641,587 (GRCm39) L5176Q possibly damaging Het
Tubgcp2 A G 7: 139,587,354 (GRCm39) I337T possibly damaging Het
Ubr4 T C 4: 139,137,934 (GRCm39) I1097T probably damaging Het
Zdhhc2 T A 8: 40,898,825 (GRCm39) M45K probably benign Het
Zfp383 T A 7: 29,614,166 (GRCm39) D140E probably damaging Het
Zfp712 C A 13: 67,189,425 (GRCm39) K367N probably damaging Het
Zfp763 C T 17: 33,237,949 (GRCm39) A399T probably damaging Het
Other mutations in Vmn2r61
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00158:Vmn2r61 APN 7 41,950,175 (GRCm39) missense possibly damaging 0.96
IGL00824:Vmn2r61 APN 7 41,916,438 (GRCm39) missense probably benign 0.03
IGL00903:Vmn2r61 APN 7 41,949,935 (GRCm39) missense probably damaging 1.00
IGL01125:Vmn2r61 APN 7 41,909,550 (GRCm39) missense probably damaging 1.00
IGL01393:Vmn2r61 APN 7 41,916,258 (GRCm39) missense probably benign 0.08
IGL01712:Vmn2r61 APN 7 41,909,661 (GRCm39) missense probably damaging 0.98
IGL01822:Vmn2r61 APN 7 41,950,130 (GRCm39) missense probably benign 0.18
IGL01835:Vmn2r61 APN 7 41,950,015 (GRCm39) missense probably benign 0.12
IGL01844:Vmn2r61 APN 7 41,909,639 (GRCm39) missense probably benign 0.00
IGL01953:Vmn2r61 APN 7 41,949,613 (GRCm39) missense probably damaging 1.00
IGL02032:Vmn2r61 APN 7 41,949,466 (GRCm39) missense probably damaging 0.99
IGL02054:Vmn2r61 APN 7 41,926,158 (GRCm39) critical splice donor site probably null
IGL02569:Vmn2r61 APN 7 41,926,070 (GRCm39) missense probably damaging 1.00
IGL02697:Vmn2r61 APN 7 41,924,892 (GRCm39) missense possibly damaging 0.55
IGL02958:Vmn2r61 APN 7 41,949,361 (GRCm39) missense probably benign
IGL03290:Vmn2r61 APN 7 41,915,408 (GRCm39) missense probably benign 0.00
IGL03337:Vmn2r61 APN 7 41,916,509 (GRCm39) missense possibly damaging 0.58
IGL03369:Vmn2r61 APN 7 41,909,517 (GRCm39) missense probably benign
IGL03402:Vmn2r61 APN 7 41,909,679 (GRCm39) missense probably benign
R0026:Vmn2r61 UTSW 7 41,924,898 (GRCm39) missense possibly damaging 0.64
R0319:Vmn2r61 UTSW 7 41,949,941 (GRCm39) missense probably damaging 0.99
R0433:Vmn2r61 UTSW 7 41,915,335 (GRCm39) missense probably benign 0.02
R0555:Vmn2r61 UTSW 7 41,915,442 (GRCm39) missense probably benign 0.02
R0691:Vmn2r61 UTSW 7 41,949,844 (GRCm39) missense probably damaging 1.00
R1701:Vmn2r61 UTSW 7 41,949,935 (GRCm39) missense probably damaging 1.00
R1718:Vmn2r61 UTSW 7 41,950,121 (GRCm39) missense probably benign
R1835:Vmn2r61 UTSW 7 41,916,076 (GRCm39) nonsense probably null
R1920:Vmn2r61 UTSW 7 41,949,710 (GRCm39) missense possibly damaging 0.73
R2069:Vmn2r61 UTSW 7 41,949,425 (GRCm39) missense probably benign 0.06
R2326:Vmn2r61 UTSW 7 41,916,287 (GRCm39) missense probably damaging 1.00
R2402:Vmn2r61 UTSW 7 41,949,529 (GRCm39) missense possibly damaging 0.90
R3103:Vmn2r61 UTSW 7 41,916,067 (GRCm39) missense possibly damaging 0.73
R3107:Vmn2r61 UTSW 7 41,916,491 (GRCm39) missense possibly damaging 0.82
R4426:Vmn2r61 UTSW 7 41,950,159 (GRCm39) missense probably benign
R4426:Vmn2r61 UTSW 7 41,950,157 (GRCm39) missense probably benign
R4484:Vmn2r61 UTSW 7 41,950,120 (GRCm39) missense probably benign
R4748:Vmn2r61 UTSW 7 41,916,565 (GRCm39) missense probably damaging 0.96
R4835:Vmn2r61 UTSW 7 41,916,459 (GRCm39) missense possibly damaging 0.52
R4863:Vmn2r61 UTSW 7 41,950,132 (GRCm39) missense probably benign 0.03
R4923:Vmn2r61 UTSW 7 41,916,520 (GRCm39) missense probably damaging 1.00
R4968:Vmn2r61 UTSW 7 41,949,478 (GRCm39) missense probably benign 0.14
R5297:Vmn2r61 UTSW 7 41,909,646 (GRCm39) missense probably benign
R5497:Vmn2r61 UTSW 7 41,924,906 (GRCm39) missense possibly damaging 0.95
R5508:Vmn2r61 UTSW 7 41,916,242 (GRCm39) missense possibly damaging 0.52
R5587:Vmn2r61 UTSW 7 41,949,911 (GRCm39) missense probably damaging 1.00
R5615:Vmn2r61 UTSW 7 41,949,917 (GRCm39) missense probably damaging 1.00
R5615:Vmn2r61 UTSW 7 41,916,677 (GRCm39) missense probably benign 0.00
R5782:Vmn2r61 UTSW 7 41,949,253 (GRCm39) missense probably damaging 1.00
R6136:Vmn2r61 UTSW 7 41,916,455 (GRCm39) missense probably damaging 1.00
R6207:Vmn2r61 UTSW 7 41,909,616 (GRCm39) missense probably benign 0.01
R6265:Vmn2r61 UTSW 7 41,915,915 (GRCm39) missense probably benign 0.01
R6272:Vmn2r61 UTSW 7 41,949,242 (GRCm39) missense probably damaging 1.00
R6355:Vmn2r61 UTSW 7 41,916,659 (GRCm39) missense probably benign 0.00
R6469:Vmn2r61 UTSW 7 41,915,283 (GRCm39) nonsense probably null
R6554:Vmn2r61 UTSW 7 41,926,139 (GRCm39) missense probably damaging 1.00
R6699:Vmn2r61 UTSW 7 41,949,580 (GRCm39) missense probably benign
R6768:Vmn2r61 UTSW 7 41,949,748 (GRCm39) missense probably damaging 1.00
R6824:Vmn2r61 UTSW 7 41,949,403 (GRCm39) missense probably benign 0.10
R6930:Vmn2r61 UTSW 7 41,949,364 (GRCm39) missense probably benign 0.02
R7053:Vmn2r61 UTSW 7 41,916,557 (GRCm39) missense probably damaging 0.96
R7238:Vmn2r61 UTSW 7 41,916,629 (GRCm39) missense possibly damaging 0.73
R7332:Vmn2r61 UTSW 7 41,909,534 (GRCm39) missense probably benign 0.00
R7359:Vmn2r61 UTSW 7 41,915,407 (GRCm39) missense probably benign 0.11
R7553:Vmn2r61 UTSW 7 41,916,205 (GRCm39) missense not run
R7710:Vmn2r61 UTSW 7 41,916,472 (GRCm39) missense probably damaging 1.00
R7732:Vmn2r61 UTSW 7 41,916,097 (GRCm39) missense probably benign
R7839:Vmn2r61 UTSW 7 41,916,032 (GRCm39) missense probably damaging 0.97
R7916:Vmn2r61 UTSW 7 41,949,935 (GRCm39) missense probably damaging 1.00
R8026:Vmn2r61 UTSW 7 41,916,141 (GRCm39) missense probably benign 0.02
R8440:Vmn2r61 UTSW 7 41,916,080 (GRCm39) missense probably benign 0.02
R8499:Vmn2r61 UTSW 7 41,949,700 (GRCm39) missense probably damaging 0.99
R8771:Vmn2r61 UTSW 7 41,916,194 (GRCm39) missense probably damaging 0.99
R8847:Vmn2r61 UTSW 7 41,950,010 (GRCm39) missense probably damaging 1.00
R8986:Vmn2r61 UTSW 7 41,915,325 (GRCm39) nonsense probably null
R9290:Vmn2r61 UTSW 7 41,915,385 (GRCm39) missense probably benign 0.27
R9311:Vmn2r61 UTSW 7 41,950,092 (GRCm39) missense possibly damaging 0.92
R9324:Vmn2r61 UTSW 7 41,916,619 (GRCm39) missense probably benign 0.00
R9476:Vmn2r61 UTSW 7 41,949,593 (GRCm39) missense probably damaging 1.00
R9521:Vmn2r61 UTSW 7 41,916,626 (GRCm39) missense probably damaging 0.99
R9619:Vmn2r61 UTSW 7 41,926,136 (GRCm39) missense probably damaging 0.98
R9729:Vmn2r61 UTSW 7 41,949,917 (GRCm39) missense probably damaging 1.00
Z1088:Vmn2r61 UTSW 7 41,949,388 (GRCm39) missense possibly damaging 0.93
Z1176:Vmn2r61 UTSW 7 41,916,166 (GRCm39) missense probably benign 0.00
Z1176:Vmn2r61 UTSW 7 41,909,585 (GRCm39) missense possibly damaging 0.46
Predicted Primers PCR Primer
(F):5'- GAATCTGGATTCTAACATCTCCACC -3'
(R):5'- TGTGTGTCTGATGTCAATACAGGAG -3'

Sequencing Primer
(F):5'- ATACTCAGGCTGAACATGGTC -3'
(R):5'- GTAGCACTTGGGAGCAAA -3'
Posted On 2016-06-15