Incidental Mutation 'R5049:Map4'
ID |
394531 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Map4
|
Ensembl Gene |
ENSMUSG00000032479 |
Gene Name |
microtubule-associated protein 4 |
Synonyms |
MAP 4, Mtap4 |
MMRRC Submission |
042639-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R5049 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
9 |
Chromosomal Location |
109760528-109913023 bp(+) (GRCm39) |
Type of Mutation |
nonsense |
DNA Base Change (assembly) |
T to A
at 109908882 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Leucine to Stop codon
at position 23
(L23*)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000035055]
[ENSMUST00000062368]
[ENSMUST00000111991]
[ENSMUST00000163979]
[ENSMUST00000164930]
[ENSMUST00000165596]
[ENSMUST00000165876]
[ENSMUST00000198511]
[ENSMUST00000199161]
[ENSMUST00000199461]
[ENSMUST00000199498]
[ENSMUST00000198425]
[ENSMUST00000197928]
[ENSMUST00000199529]
[ENSMUST00000196171]
[ENSMUST00000199548]
[ENSMUST00000200066]
[ENSMUST00000199693]
|
AlphaFold |
P27546 |
Predicted Effect |
probably null
Transcript: ENSMUST00000035055
AA Change: L1034*
|
SMART Domains |
Protein: ENSMUSP00000035055 Gene: ENSMUSG00000032479 AA Change: L1034*
Domain | Start | End | E-Value | Type |
low complexity region
|
254 |
265 |
N/A |
INTRINSIC |
internal_repeat_1
|
266 |
379 |
4.96e-7 |
PROSPERO |
low complexity region
|
401 |
420 |
N/A |
INTRINSIC |
internal_repeat_1
|
439 |
550 |
4.96e-7 |
PROSPERO |
low complexity region
|
659 |
674 |
N/A |
INTRINSIC |
low complexity region
|
720 |
742 |
N/A |
INTRINSIC |
low complexity region
|
760 |
775 |
N/A |
INTRINSIC |
low complexity region
|
879 |
889 |
N/A |
INTRINSIC |
Pfam:Tubulin-binding
|
903 |
926 |
2e-12 |
PFAM |
Pfam:Tubulin-binding
|
965 |
995 |
4.9e-18 |
PFAM |
Pfam:Tubulin-binding
|
996 |
1026 |
7.4e-18 |
PFAM |
Pfam:Tubulin-binding
|
1027 |
1058 |
4.4e-15 |
PFAM |
low complexity region
|
1093 |
1108 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000062368
|
SMART Domains |
Protein: ENSMUSP00000062622 Gene: ENSMUSG00000032480
Domain | Start | End | E-Value | Type |
low complexity region
|
1 |
12 |
N/A |
INTRINSIC |
low complexity region
|
48 |
64 |
N/A |
INTRINSIC |
internal_repeat_1
|
76 |
123 |
2.53e-5 |
PROSPERO |
low complexity region
|
217 |
228 |
N/A |
INTRINSIC |
internal_repeat_1
|
268 |
314 |
2.53e-5 |
PROSPERO |
low complexity region
|
321 |
342 |
N/A |
INTRINSIC |
DEXDc
|
461 |
650 |
9.66e-29 |
SMART |
low complexity region
|
679 |
689 |
N/A |
INTRINSIC |
HELICc
|
711 |
816 |
1.63e-17 |
SMART |
HA2
|
879 |
969 |
5.16e-22 |
SMART |
Pfam:OB_NTP_bind
|
984 |
1134 |
5.7e-9 |
PFAM |
low complexity region
|
1200 |
1208 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000111991
|
SMART Domains |
Protein: ENSMUSP00000107622 Gene: ENSMUSG00000032480
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
47 |
94 |
6.21e-5 |
PROSPERO |
low complexity region
|
188 |
199 |
N/A |
INTRINSIC |
internal_repeat_1
|
239 |
285 |
6.21e-5 |
PROSPERO |
low complexity region
|
292 |
313 |
N/A |
INTRINSIC |
DEXDc
|
432 |
621 |
9.66e-29 |
SMART |
low complexity region
|
650 |
660 |
N/A |
INTRINSIC |
HELICc
|
682 |
787 |
1.63e-17 |
SMART |
HA2
|
850 |
940 |
5.16e-22 |
SMART |
Pfam:OB_NTP_bind
|
952 |
1106 |
2.1e-7 |
PFAM |
low complexity region
|
1171 |
1179 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000163979
AA Change: L323*
|
SMART Domains |
Protein: ENSMUSP00000129362 Gene: ENSMUSG00000032479 AA Change: L323*
Domain | Start | End | E-Value | Type |
low complexity region
|
9 |
17 |
N/A |
INTRINSIC |
low complexity region
|
324 |
341 |
N/A |
INTRINSIC |
low complexity region
|
365 |
376 |
N/A |
INTRINSIC |
low complexity region
|
506 |
521 |
N/A |
INTRINSIC |
low complexity region
|
567 |
589 |
N/A |
INTRINSIC |
low complexity region
|
607 |
622 |
N/A |
INTRINSIC |
low complexity region
|
726 |
736 |
N/A |
INTRINSIC |
Pfam:Tubulin-binding
|
743 |
773 |
5.8e-16 |
PFAM |
Pfam:Tubulin-binding
|
774 |
804 |
2.2e-18 |
PFAM |
Pfam:Tubulin-binding
|
805 |
836 |
1.6e-11 |
PFAM |
low complexity region
|
871 |
886 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000164930
AA Change: L843*
|
SMART Domains |
Protein: ENSMUSP00000131285 Gene: ENSMUSG00000032479 AA Change: L843*
Domain | Start | End | E-Value | Type |
low complexity region
|
9 |
17 |
N/A |
INTRINSIC |
low complexity region
|
324 |
341 |
N/A |
INTRINSIC |
low complexity region
|
365 |
376 |
N/A |
INTRINSIC |
low complexity region
|
506 |
521 |
N/A |
INTRINSIC |
low complexity region
|
567 |
589 |
N/A |
INTRINSIC |
low complexity region
|
607 |
622 |
N/A |
INTRINSIC |
low complexity region
|
726 |
736 |
N/A |
INTRINSIC |
Pfam:Tubulin-binding
|
743 |
773 |
6e-16 |
PFAM |
Pfam:Tubulin-binding
|
774 |
804 |
4.5e-19 |
PFAM |
Pfam:Tubulin-binding
|
805 |
835 |
2.3e-18 |
PFAM |
Pfam:Tubulin-binding
|
836 |
867 |
1.6e-11 |
PFAM |
low complexity region
|
902 |
917 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000165596
|
SMART Domains |
Protein: ENSMUSP00000129174 Gene: ENSMUSG00000032480
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
70 |
117 |
6.77e-5 |
PROSPERO |
low complexity region
|
211 |
222 |
N/A |
INTRINSIC |
internal_repeat_1
|
262 |
308 |
6.77e-5 |
PROSPERO |
low complexity region
|
315 |
336 |
N/A |
INTRINSIC |
DEXDc
|
455 |
644 |
9.66e-29 |
SMART |
low complexity region
|
673 |
683 |
N/A |
INTRINSIC |
HELICc
|
705 |
810 |
1.63e-17 |
SMART |
HA2
|
873 |
963 |
5.16e-22 |
SMART |
Pfam:OB_NTP_bind
|
975 |
1129 |
1.8e-7 |
PFAM |
low complexity region
|
1194 |
1202 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000165876
AA Change: L1034*
|
SMART Domains |
Protein: ENSMUSP00000132662 Gene: ENSMUSG00000032479 AA Change: L1034*
Domain | Start | End | E-Value | Type |
low complexity region
|
254 |
265 |
N/A |
INTRINSIC |
internal_repeat_1
|
266 |
379 |
4.95e-7 |
PROSPERO |
low complexity region
|
401 |
420 |
N/A |
INTRINSIC |
internal_repeat_1
|
439 |
550 |
4.95e-7 |
PROSPERO |
low complexity region
|
659 |
674 |
N/A |
INTRINSIC |
low complexity region
|
720 |
742 |
N/A |
INTRINSIC |
low complexity region
|
760 |
775 |
N/A |
INTRINSIC |
low complexity region
|
879 |
889 |
N/A |
INTRINSIC |
Pfam:Tubulin-binding
|
896 |
926 |
8.5e-16 |
PFAM |
Pfam:Tubulin-binding
|
965 |
995 |
6.4e-19 |
PFAM |
Pfam:Tubulin-binding
|
996 |
1026 |
3.3e-18 |
PFAM |
Pfam:Tubulin-binding
|
1027 |
1058 |
2.3e-11 |
PFAM |
low complexity region
|
1093 |
1108 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000198511
AA Change: L124*
|
SMART Domains |
Protein: ENSMUSP00000142558 Gene: ENSMUSG00000032479 AA Change: L124*
Domain | Start | End | E-Value | Type |
low complexity region
|
7 |
17 |
N/A |
INTRINSIC |
Pfam:Tubulin-binding
|
24 |
54 |
7.3e-14 |
PFAM |
Pfam:Tubulin-binding
|
55 |
85 |
5.3e-17 |
PFAM |
Pfam:Tubulin-binding
|
86 |
116 |
2.8e-16 |
PFAM |
Pfam:Tubulin-binding
|
117 |
148 |
1.9e-9 |
PFAM |
low complexity region
|
183 |
198 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000199161
AA Change: L116*
|
SMART Domains |
Protein: ENSMUSP00000143205 Gene: ENSMUSG00000032479 AA Change: L116*
Domain | Start | End | E-Value | Type |
Pfam:Tubulin-binding
|
16 |
46 |
6.7e-14 |
PFAM |
Pfam:Tubulin-binding
|
47 |
77 |
4.9e-17 |
PFAM |
Pfam:Tubulin-binding
|
78 |
108 |
2.5e-16 |
PFAM |
Pfam:Tubulin-binding
|
109 |
140 |
1.7e-9 |
PFAM |
low complexity region
|
176 |
191 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000199461
AA Change: L185*
|
SMART Domains |
Protein: ENSMUSP00000143296 Gene: ENSMUSG00000032479 AA Change: L185*
Domain | Start | End | E-Value | Type |
low complexity region
|
99 |
109 |
N/A |
INTRINSIC |
Pfam:Tubulin-binding
|
116 |
146 |
1e-13 |
PFAM |
Pfam:Tubulin-binding
|
147 |
177 |
3.8e-16 |
PFAM |
Pfam:Tubulin-binding
|
178 |
209 |
2.6e-9 |
PFAM |
low complexity region
|
244 |
259 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000199498
AA Change: L812*
|
SMART Domains |
Protein: ENSMUSP00000142439 Gene: ENSMUSG00000032479 AA Change: L812*
Domain | Start | End | E-Value | Type |
low complexity region
|
9 |
17 |
N/A |
INTRINSIC |
low complexity region
|
324 |
341 |
N/A |
INTRINSIC |
low complexity region
|
365 |
376 |
N/A |
INTRINSIC |
low complexity region
|
506 |
521 |
N/A |
INTRINSIC |
low complexity region
|
567 |
589 |
N/A |
INTRINSIC |
low complexity region
|
607 |
622 |
N/A |
INTRINSIC |
low complexity region
|
726 |
736 |
N/A |
INTRINSIC |
Pfam:Tubulin-binding
|
743 |
773 |
5.8e-16 |
PFAM |
Pfam:Tubulin-binding
|
774 |
804 |
2.2e-18 |
PFAM |
Pfam:Tubulin-binding
|
805 |
836 |
1.6e-11 |
PFAM |
low complexity region
|
871 |
886 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000198026
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000196763
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000198425
|
SMART Domains |
Protein: ENSMUSP00000142659 Gene: ENSMUSG00000032480
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
70 |
117 |
6.77e-5 |
PROSPERO |
low complexity region
|
211 |
222 |
N/A |
INTRINSIC |
internal_repeat_1
|
262 |
308 |
6.77e-5 |
PROSPERO |
low complexity region
|
315 |
336 |
N/A |
INTRINSIC |
DEXDc
|
455 |
644 |
9.66e-29 |
SMART |
low complexity region
|
673 |
683 |
N/A |
INTRINSIC |
HELICc
|
705 |
810 |
1.63e-17 |
SMART |
HA2
|
873 |
963 |
5.16e-22 |
SMART |
Pfam:OB_NTP_bind
|
975 |
1129 |
1.8e-7 |
PFAM |
low complexity region
|
1194 |
1202 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000197928
|
SMART Domains |
Protein: ENSMUSP00000142549 Gene: ENSMUSG00000032480
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
47 |
94 |
6.21e-5 |
PROSPERO |
low complexity region
|
188 |
199 |
N/A |
INTRINSIC |
internal_repeat_1
|
239 |
285 |
6.21e-5 |
PROSPERO |
low complexity region
|
292 |
313 |
N/A |
INTRINSIC |
DEXDc
|
432 |
621 |
9.66e-29 |
SMART |
low complexity region
|
650 |
660 |
N/A |
INTRINSIC |
HELICc
|
682 |
787 |
1.63e-17 |
SMART |
HA2
|
850 |
940 |
5.16e-22 |
SMART |
Pfam:OB_NTP_bind
|
952 |
1106 |
2.1e-7 |
PFAM |
low complexity region
|
1171 |
1179 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000199332
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000199529
|
SMART Domains |
Protein: ENSMUSP00000142489 Gene: ENSMUSG00000032480
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
47 |
94 |
6.21e-5 |
PROSPERO |
low complexity region
|
188 |
199 |
N/A |
INTRINSIC |
internal_repeat_1
|
239 |
285 |
6.21e-5 |
PROSPERO |
low complexity region
|
292 |
313 |
N/A |
INTRINSIC |
DEXDc
|
432 |
621 |
9.66e-29 |
SMART |
low complexity region
|
650 |
660 |
N/A |
INTRINSIC |
HELICc
|
682 |
787 |
1.63e-17 |
SMART |
HA2
|
850 |
940 |
5.16e-22 |
SMART |
Pfam:OB_NTP_bind
|
952 |
1106 |
2.1e-7 |
PFAM |
low complexity region
|
1171 |
1179 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000196171
|
SMART Domains |
Protein: ENSMUSP00000143616 Gene: ENSMUSG00000032480
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
39 |
86 |
5.84e-5 |
PROSPERO |
low complexity region
|
180 |
191 |
N/A |
INTRINSIC |
internal_repeat_1
|
231 |
277 |
5.84e-5 |
PROSPERO |
low complexity region
|
284 |
305 |
N/A |
INTRINSIC |
DEXDc
|
424 |
613 |
9.66e-29 |
SMART |
low complexity region
|
642 |
652 |
N/A |
INTRINSIC |
HELICc
|
674 |
779 |
1.63e-17 |
SMART |
HA2
|
842 |
932 |
5.16e-22 |
SMART |
Pfam:OB_NTP_bind
|
947 |
1097 |
2.8e-9 |
PFAM |
low complexity region
|
1163 |
1171 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000199985
AA Change: L5*
|
Predicted Effect |
probably null
Transcript: ENSMUST00000199548
AA Change: L216*
|
SMART Domains |
Protein: ENSMUSP00000143408 Gene: ENSMUSG00000032479 AA Change: L216*
Domain | Start | End | E-Value | Type |
low complexity region
|
99 |
109 |
N/A |
INTRINSIC |
Pfam:Tubulin-binding
|
116 |
146 |
1.1e-13 |
PFAM |
Pfam:Tubulin-binding
|
147 |
177 |
7.9e-17 |
PFAM |
Pfam:Tubulin-binding
|
178 |
208 |
4.1e-16 |
PFAM |
Pfam:Tubulin-binding
|
209 |
240 |
2.8e-9 |
PFAM |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000200480
AA Change: L23*
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000200066
|
SMART Domains |
Protein: ENSMUSP00000143371 Gene: ENSMUSG00000032480
Domain | Start | End | E-Value | Type |
internal_repeat_1
|
47 |
94 |
6.21e-5 |
PROSPERO |
low complexity region
|
188 |
199 |
N/A |
INTRINSIC |
internal_repeat_1
|
239 |
285 |
6.21e-5 |
PROSPERO |
low complexity region
|
292 |
313 |
N/A |
INTRINSIC |
DEXDc
|
432 |
621 |
9.66e-29 |
SMART |
low complexity region
|
650 |
660 |
N/A |
INTRINSIC |
HELICc
|
682 |
787 |
1.63e-17 |
SMART |
HA2
|
850 |
940 |
5.16e-22 |
SMART |
Pfam:OB_NTP_bind
|
952 |
1106 |
2.1e-7 |
PFAM |
low complexity region
|
1171 |
1179 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000200593
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000199693
|
Meta Mutation Damage Score |
0.9755 |
Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.3%
- 10x: 95.8%
- 20x: 90.4%
|
Validation Efficiency |
97% (89/92) |
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a major non-neuronal microtubule-associated protein. This protein contains a domain similar to the microtubule-binding domains of neuronal microtubule-associated protein (MAP2) and microtubule-associated protein tau (MAPT/TAU). This protein promotes microtubule assembly, and has been shown to counteract destabilization of interphase microtubule catastrophe promotion. Cyclin B was found to interact with this protein, which targets cell division cycle 2 (CDC2) kinase to microtubules. The phosphorylation of this protein affects microtubule properties and cell cycle progression. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Aug 2008] PHENOTYPE: Mice homozygous for a gene trapped allele are viable and do not display any overt phenotypic abnormalities. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 77 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Aamp |
A |
G |
1: 74,321,698 (GRCm39) |
S76P |
probably damaging |
Het |
Acot8 |
A |
G |
2: 164,641,610 (GRCm39) |
|
probably benign |
Het |
Angptl7 |
A |
G |
4: 148,582,468 (GRCm39) |
F143L |
probably benign |
Het |
Atxn7l1 |
A |
G |
12: 33,408,686 (GRCm39) |
T283A |
probably benign |
Het |
Bltp1 |
T |
A |
3: 37,094,655 (GRCm39) |
|
probably benign |
Het |
Bltp1 |
T |
C |
3: 37,095,539 (GRCm39) |
M1016T |
probably damaging |
Het |
Brd3 |
G |
T |
2: 27,340,589 (GRCm39) |
|
probably benign |
Het |
C130026L21Rik |
T |
A |
5: 111,729,702 (GRCm39) |
|
noncoding transcript |
Het |
Cbr4 |
T |
G |
8: 61,948,238 (GRCm39) |
|
probably null |
Het |
Ccl19 |
A |
G |
4: 42,756,268 (GRCm39) |
|
probably null |
Het |
Ccl2 |
G |
T |
11: 81,927,333 (GRCm39) |
C34F |
probably damaging |
Het |
Dnah12 |
A |
T |
14: 26,456,852 (GRCm39) |
T873S |
probably benign |
Het |
Dnah2 |
T |
C |
11: 69,338,992 (GRCm39) |
N3118S |
probably damaging |
Het |
Elapor2 |
A |
G |
5: 9,478,488 (GRCm39) |
T451A |
probably damaging |
Het |
Epb41l1 |
C |
A |
2: 156,366,859 (GRCm39) |
P564Q |
possibly damaging |
Het |
Extl3 |
A |
T |
14: 65,313,481 (GRCm39) |
M567K |
probably benign |
Het |
Fhip2a |
T |
C |
19: 57,374,737 (GRCm39) |
I704T |
possibly damaging |
Het |
Foxf2 |
T |
C |
13: 31,811,158 (GRCm39) |
S366P |
probably benign |
Het |
Gamt |
T |
A |
10: 80,094,788 (GRCm39) |
T186S |
probably benign |
Het |
Gcn1 |
T |
A |
5: 115,744,730 (GRCm39) |
M1642K |
probably damaging |
Het |
Gm21738 |
T |
A |
14: 19,415,957 (GRCm38) |
Y194F |
probably benign |
Het |
Golga1 |
A |
T |
2: 38,937,747 (GRCm39) |
M115K |
probably damaging |
Het |
Hapstr1 |
T |
A |
16: 8,661,073 (GRCm39) |
D183E |
probably damaging |
Het |
Herc3 |
A |
G |
6: 58,871,524 (GRCm39) |
|
probably null |
Het |
Hes2 |
C |
A |
4: 152,244,331 (GRCm39) |
L39I |
possibly damaging |
Het |
Hopx |
C |
A |
5: 77,242,899 (GRCm39) |
|
probably benign |
Het |
Idi1 |
C |
T |
13: 8,938,078 (GRCm39) |
P175S |
probably damaging |
Het |
Ifit1bl1 |
A |
T |
19: 34,571,481 (GRCm39) |
C325* |
probably null |
Het |
Ighv7-3 |
T |
C |
12: 114,116,953 (GRCm39) |
I70V |
probably benign |
Het |
Kcnq3 |
T |
C |
15: 66,157,746 (GRCm39) |
T110A |
probably benign |
Het |
Kif5a |
T |
C |
10: 127,075,708 (GRCm39) |
D451G |
possibly damaging |
Het |
Lama3 |
A |
G |
18: 12,715,668 (GRCm39) |
E1708G |
probably benign |
Het |
Lrriq4 |
T |
A |
3: 30,705,086 (GRCm39) |
D371E |
probably damaging |
Het |
Lyst |
T |
A |
13: 13,810,649 (GRCm39) |
V773E |
probably damaging |
Het |
Mapkbp1 |
G |
T |
2: 119,845,982 (GRCm39) |
|
probably benign |
Het |
Mrpl30 |
A |
T |
1: 37,936,791 (GRCm39) |
D52V |
possibly damaging |
Het |
Or10ag57 |
A |
T |
2: 87,219,002 (GRCm39) |
T318S |
probably benign |
Het |
Or13j1 |
A |
T |
4: 43,706,259 (GRCm39) |
L103Q |
probably damaging |
Het |
Pard3b |
T |
A |
1: 62,200,320 (GRCm39) |
H286Q |
probably benign |
Het |
Parp4 |
A |
G |
14: 56,873,188 (GRCm39) |
K1144R |
possibly damaging |
Het |
Pdcd11 |
C |
A |
19: 47,095,554 (GRCm39) |
S625R |
probably benign |
Het |
Pkhd1l1 |
T |
C |
15: 44,321,012 (GRCm39) |
S22P |
probably benign |
Het |
Prss32 |
A |
T |
17: 24,078,221 (GRCm39) |
E302D |
possibly damaging |
Het |
Prss45 |
A |
G |
9: 110,669,538 (GRCm39) |
K205E |
probably damaging |
Het |
Puf60 |
T |
A |
15: 75,942,323 (GRCm39) |
I500F |
probably damaging |
Het |
Ryr3 |
A |
T |
2: 112,470,516 (GRCm39) |
I4623N |
probably damaging |
Het |
Sh3bp5l |
T |
A |
11: 58,228,950 (GRCm39) |
|
probably benign |
Het |
Slc3a1 |
T |
G |
17: 85,340,273 (GRCm39) |
Y232D |
probably damaging |
Het |
Slc8a3 |
A |
G |
12: 81,260,906 (GRCm39) |
Y608H |
probably damaging |
Het |
Socs7 |
G |
T |
11: 97,269,469 (GRCm39) |
R429L |
probably benign |
Het |
Sorcs3 |
C |
A |
19: 48,748,390 (GRCm39) |
N786K |
possibly damaging |
Het |
Sp4 |
A |
T |
12: 118,218,207 (GRCm39) |
M680K |
probably benign |
Het |
Tas2r131 |
T |
C |
6: 132,934,540 (GRCm39) |
T90A |
probably damaging |
Het |
Tasor2 |
A |
T |
13: 3,624,000 (GRCm39) |
H1983Q |
probably benign |
Het |
Tbx21 |
T |
C |
11: 97,005,536 (GRCm39) |
H143R |
probably benign |
Het |
Tg |
T |
A |
15: 66,699,231 (GRCm39) |
C833* |
probably null |
Het |
Tmem245 |
A |
G |
4: 56,925,057 (GRCm39) |
S355P |
probably benign |
Het |
Tmem86b |
G |
A |
7: 4,631,465 (GRCm39) |
P191S |
possibly damaging |
Het |
Tnc |
A |
G |
4: 63,936,223 (GRCm39) |
C238R |
probably damaging |
Het |
Tnn |
T |
A |
1: 159,968,308 (GRCm39) |
E361D |
probably benign |
Het |
Tpp2 |
T |
C |
1: 44,040,633 (GRCm39) |
V298A |
possibly damaging |
Het |
Trav7-6 |
A |
G |
14: 53,954,536 (GRCm39) |
N22S |
probably damaging |
Het |
Trim75 |
T |
C |
8: 65,435,091 (GRCm39) |
|
probably null |
Het |
Trrap |
T |
A |
5: 144,763,527 (GRCm39) |
I2492N |
probably damaging |
Het |
Ufl1 |
G |
T |
4: 25,254,773 (GRCm39) |
A561E |
probably benign |
Het |
Uqcc1 |
A |
G |
2: 155,752,341 (GRCm39) |
V86A |
probably damaging |
Het |
Vmn1r184 |
A |
G |
7: 25,966,793 (GRCm39) |
I180V |
possibly damaging |
Het |
Vmn1r185 |
A |
G |
7: 26,310,920 (GRCm39) |
F195S |
possibly damaging |
Het |
Vmn2r4 |
A |
C |
3: 64,306,019 (GRCm39) |
|
probably null |
Het |
Vmn2r87 |
T |
C |
10: 130,308,298 (GRCm39) |
T647A |
probably damaging |
Het |
Vps13d |
A |
T |
4: 144,813,336 (GRCm39) |
H198Q |
probably damaging |
Het |
Wdfy4 |
T |
C |
14: 32,874,627 (GRCm39) |
T154A |
possibly damaging |
Het |
Xirp2 |
A |
G |
2: 67,347,478 (GRCm39) |
M3240V |
probably benign |
Het |
Zfp101 |
T |
C |
17: 33,600,872 (GRCm39) |
R295G |
possibly damaging |
Het |
Zfp619 |
G |
A |
7: 39,184,938 (GRCm39) |
V323I |
probably benign |
Het |
Zfy1 |
A |
T |
Y: 726,004 (GRCm39) |
I587N |
possibly damaging |
Het |
Zswim6 |
C |
T |
13: 107,863,110 (GRCm39) |
|
noncoding transcript |
Het |
|
Other mutations in Map4 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00565:Map4
|
APN |
9 |
109,901,672 (GRCm39) |
splice site |
probably benign |
|
IGL01331:Map4
|
APN |
9 |
109,863,869 (GRCm39) |
missense |
probably benign |
0.04 |
IGL01599:Map4
|
APN |
9 |
109,863,836 (GRCm39) |
missense |
probably benign |
0.26 |
IGL01631:Map4
|
APN |
9 |
109,892,201 (GRCm39) |
unclassified |
probably benign |
|
IGL02208:Map4
|
APN |
9 |
109,807,938 (GRCm39) |
start codon destroyed |
probably null |
1.00 |
IGL02455:Map4
|
APN |
9 |
109,828,901 (GRCm39) |
missense |
probably benign |
0.15 |
IGL02625:Map4
|
APN |
9 |
109,893,485 (GRCm39) |
missense |
probably damaging |
1.00 |
PIT4486001:Map4
|
UTSW |
9 |
109,901,682 (GRCm39) |
missense |
probably damaging |
1.00 |
R0149:Map4
|
UTSW |
9 |
109,896,692 (GRCm39) |
missense |
probably damaging |
0.96 |
R0384:Map4
|
UTSW |
9 |
109,863,696 (GRCm39) |
missense |
probably damaging |
0.99 |
R0392:Map4
|
UTSW |
9 |
109,907,113 (GRCm39) |
missense |
probably damaging |
1.00 |
R0496:Map4
|
UTSW |
9 |
109,868,918 (GRCm39) |
intron |
probably benign |
|
R0526:Map4
|
UTSW |
9 |
109,866,346 (GRCm39) |
splice site |
probably null |
|
R0555:Map4
|
UTSW |
9 |
109,808,171 (GRCm39) |
splice site |
probably benign |
|
R0571:Map4
|
UTSW |
9 |
109,865,834 (GRCm39) |
missense |
probably benign |
0.00 |
R0698:Map4
|
UTSW |
9 |
109,897,856 (GRCm39) |
nonsense |
probably null |
|
R0762:Map4
|
UTSW |
9 |
109,867,546 (GRCm39) |
intron |
probably benign |
|
R0862:Map4
|
UTSW |
9 |
109,808,037 (GRCm39) |
missense |
probably damaging |
1.00 |
R0864:Map4
|
UTSW |
9 |
109,808,037 (GRCm39) |
missense |
probably damaging |
1.00 |
R1168:Map4
|
UTSW |
9 |
109,864,032 (GRCm39) |
missense |
probably benign |
0.00 |
R1238:Map4
|
UTSW |
9 |
109,897,648 (GRCm39) |
missense |
probably benign |
0.00 |
R1735:Map4
|
UTSW |
9 |
109,864,023 (GRCm39) |
missense |
probably benign |
0.00 |
R1869:Map4
|
UTSW |
9 |
109,897,996 (GRCm39) |
missense |
possibly damaging |
0.95 |
R1869:Map4
|
UTSW |
9 |
109,864,032 (GRCm39) |
missense |
probably benign |
0.00 |
R2196:Map4
|
UTSW |
9 |
109,900,116 (GRCm39) |
missense |
probably damaging |
1.00 |
R2264:Map4
|
UTSW |
9 |
109,910,525 (GRCm39) |
missense |
probably damaging |
1.00 |
R2507:Map4
|
UTSW |
9 |
109,866,551 (GRCm39) |
intron |
probably benign |
|
R2512:Map4
|
UTSW |
9 |
109,863,770 (GRCm39) |
missense |
possibly damaging |
0.48 |
R3087:Map4
|
UTSW |
9 |
109,882,257 (GRCm39) |
missense |
possibly damaging |
0.84 |
R3154:Map4
|
UTSW |
9 |
109,828,860 (GRCm39) |
missense |
probably benign |
0.19 |
R3498:Map4
|
UTSW |
9 |
109,864,280 (GRCm39) |
missense |
probably benign |
0.03 |
R3547:Map4
|
UTSW |
9 |
109,881,266 (GRCm39) |
missense |
possibly damaging |
0.61 |
R3751:Map4
|
UTSW |
9 |
109,867,742 (GRCm39) |
intron |
probably benign |
|
R4036:Map4
|
UTSW |
9 |
109,861,283 (GRCm39) |
missense |
possibly damaging |
0.47 |
R4423:Map4
|
UTSW |
9 |
109,896,662 (GRCm39) |
missense |
probably damaging |
1.00 |
R4505:Map4
|
UTSW |
9 |
109,861,253 (GRCm39) |
missense |
probably benign |
0.01 |
R4561:Map4
|
UTSW |
9 |
109,881,439 (GRCm39) |
missense |
possibly damaging |
0.91 |
R4577:Map4
|
UTSW |
9 |
109,910,489 (GRCm39) |
missense |
possibly damaging |
0.48 |
R4601:Map4
|
UTSW |
9 |
109,881,887 (GRCm39) |
missense |
possibly damaging |
0.75 |
R4795:Map4
|
UTSW |
9 |
109,864,331 (GRCm39) |
missense |
probably benign |
0.00 |
R4801:Map4
|
UTSW |
9 |
109,864,325 (GRCm39) |
missense |
probably benign |
0.15 |
R4802:Map4
|
UTSW |
9 |
109,864,325 (GRCm39) |
missense |
probably benign |
0.15 |
R4999:Map4
|
UTSW |
9 |
109,867,445 (GRCm39) |
intron |
probably benign |
|
R5020:Map4
|
UTSW |
9 |
109,897,868 (GRCm39) |
missense |
probably benign |
0.02 |
R5021:Map4
|
UTSW |
9 |
109,867,157 (GRCm39) |
nonsense |
probably null |
|
R5451:Map4
|
UTSW |
9 |
109,866,851 (GRCm39) |
intron |
probably benign |
|
R5452:Map4
|
UTSW |
9 |
109,866,851 (GRCm39) |
intron |
probably benign |
|
R5453:Map4
|
UTSW |
9 |
109,866,851 (GRCm39) |
intron |
probably benign |
|
R5492:Map4
|
UTSW |
9 |
109,881,450 (GRCm39) |
missense |
possibly damaging |
0.68 |
R5532:Map4
|
UTSW |
9 |
109,863,746 (GRCm39) |
missense |
probably benign |
0.24 |
R5602:Map4
|
UTSW |
9 |
109,881,768 (GRCm39) |
missense |
possibly damaging |
0.84 |
R5628:Map4
|
UTSW |
9 |
109,910,915 (GRCm39) |
missense |
probably benign |
0.04 |
R5896:Map4
|
UTSW |
9 |
109,901,702 (GRCm39) |
missense |
possibly damaging |
0.91 |
R6017:Map4
|
UTSW |
9 |
109,863,687 (GRCm39) |
missense |
probably benign |
0.00 |
R6084:Map4
|
UTSW |
9 |
109,893,360 (GRCm39) |
missense |
probably damaging |
1.00 |
R6294:Map4
|
UTSW |
9 |
109,831,814 (GRCm39) |
missense |
possibly damaging |
0.82 |
R6397:Map4
|
UTSW |
9 |
109,856,784 (GRCm39) |
missense |
possibly damaging |
0.78 |
R6773:Map4
|
UTSW |
9 |
109,863,993 (GRCm39) |
missense |
probably benign |
0.00 |
R6997:Map4
|
UTSW |
9 |
109,881,982 (GRCm39) |
missense |
probably benign |
0.35 |
R7141:Map4
|
UTSW |
9 |
109,807,938 (GRCm39) |
start codon destroyed |
probably null |
1.00 |
R7187:Map4
|
UTSW |
9 |
109,882,201 (GRCm39) |
missense |
probably benign |
0.03 |
R7320:Map4
|
UTSW |
9 |
109,910,585 (GRCm39) |
missense |
probably benign |
0.24 |
R7469:Map4
|
UTSW |
9 |
109,856,865 (GRCm39) |
splice site |
probably null |
|
R7479:Map4
|
UTSW |
9 |
109,897,892 (GRCm39) |
missense |
possibly damaging |
0.94 |
R7487:Map4
|
UTSW |
9 |
109,856,783 (GRCm39) |
missense |
probably damaging |
1.00 |
R7690:Map4
|
UTSW |
9 |
109,828,861 (GRCm39) |
missense |
probably damaging |
0.99 |
R7780:Map4
|
UTSW |
9 |
109,863,720 (GRCm39) |
missense |
probably benign |
0.00 |
R7998:Map4
|
UTSW |
9 |
109,908,929 (GRCm39) |
missense |
probably damaging |
1.00 |
R8028:Map4
|
UTSW |
9 |
109,897,812 (GRCm39) |
missense |
probably damaging |
1.00 |
R8557:Map4
|
UTSW |
9 |
109,893,370 (GRCm39) |
splice site |
probably null |
|
R8950:Map4
|
UTSW |
9 |
109,901,702 (GRCm39) |
missense |
possibly damaging |
0.91 |
R8972:Map4
|
UTSW |
9 |
109,864,185 (GRCm39) |
missense |
probably benign |
|
R9145:Map4
|
UTSW |
9 |
109,855,268 (GRCm39) |
missense |
probably damaging |
0.99 |
R9297:Map4
|
UTSW |
9 |
109,882,480 (GRCm39) |
missense |
probably benign |
0.02 |
R9332:Map4
|
UTSW |
9 |
109,864,223 (GRCm39) |
missense |
probably benign |
0.00 |
R9354:Map4
|
UTSW |
9 |
109,897,847 (GRCm39) |
missense |
probably benign |
|
R9419:Map4
|
UTSW |
9 |
109,882,029 (GRCm39) |
missense |
possibly damaging |
0.92 |
R9430:Map4
|
UTSW |
9 |
109,863,760 (GRCm39) |
missense |
probably benign |
0.41 |
R9437:Map4
|
UTSW |
9 |
109,864,155 (GRCm39) |
missense |
possibly damaging |
0.46 |
R9718:Map4
|
UTSW |
9 |
109,901,774 (GRCm39) |
critical splice donor site |
probably null |
|
Z1177:Map4
|
UTSW |
9 |
109,897,591 (GRCm39) |
critical splice acceptor site |
probably null |
|
|
Predicted Primers |
PCR Primer
(F):5'- TAGGCATGCAGTGGTTCGAG -3'
(R):5'- ACTCCTGAAGAAACTGAGGGGC -3'
Sequencing Primer
(F):5'- GCCTTCCCTCCACAATAGG -3'
(R):5'- CGGTGACAGGCCCACTAAG -3'
|
Posted On |
2016-06-15 |