Mutagenetix > Incidental Mutation

Incidental Mutation 'R5153:Flii'

395539

Institutional Source

Beutler Lab

Gene Symbol

Flii

Ensembl Gene

ENSMUSG00000002812

Gene Name

flightless I actin binding protein

Synonyms

Fliih, 3632430F08Rik

MMRRC Submission

042735-MU

Accession Numbers

Essential gene?

Essential (E-score: 1.000) question?

Stock #

R5153 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

60604969-60618089 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 60607512 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Leucine to Glutamine at position 882 (L882Q)

Ref Sequence

ENSEMBL: ENSMUSP00000002889 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000002889] [ENSMUST00000052346] [ENSMUST00000108719]

AlphaFold

Q9JJ28

Predicted Effect

possibly damaging
Transcript: ENSMUST00000002889
AA Change: L882Q

PolyPhen 2 Score 0.895 (Sensitivity: 0.82; Specificity: 0.94)

SMART Domains

Protein: ENSMUSP00000002889
Gene: ENSMUSG00000002812
AA Change: L882Q

Domain	Start	End	E-Value	Type
LRR	55	78	1.08e-1	SMART
LRR	103	126	4.08e0	SMART
LRR	127	149	2.27e1	SMART
LRR	150	173	1.25e-1	SMART
LRR	222	244	6.78e1	SMART
LRR	245	268	2.86e-1	SMART
LRR	269	291	3.78e-1	SMART
LRR	316	339	2.82e0	SMART
LRR	340	362	2.27e2	SMART
low complexity region	403	420	N/A	INTRINSIC
GEL	499	597	4.17e-25	SMART
GEL	617	709	1.72e-26	SMART
low complexity region	727	740	N/A	INTRINSIC
GEL	745	838	2.24e-25	SMART
GEL	905	1039	1.13e-3	SMART
GEL	1056	1152	7.28e-16	SMART
GEL	1167	1263	5.51e-25	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000052346

SMART Domains

Protein: ENSMUSP00000060749
Gene: ENSMUSG00000020536

Domain	Start	End	E-Value	Type
WD40	22	62	4.42e1	SMART
WD40	64	103	1.65e1	SMART
WD40	187	223	2.74e2	SMART
WD40	226	264	2.06e0	SMART
Pfam:LLGL	278	379	1.2e-43	PFAM
WD40	424	460	3.2e0	SMART
Blast:WD40	498	541	2e-13	BLAST
Blast:WD40	585	624	4e-9	BLAST
Pfam:Lgl_C	732	978	1.2e-7	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000108719

SMART Domains

Protein: ENSMUSP00000104359
Gene: ENSMUSG00000020536

Domain	Start	End	E-Value	Type
WD40	22	62	4.42e1	SMART
WD40	64	103	1.65e1	SMART
WD40	187	223	2.74e2	SMART
WD40	226	264	2.06e0	SMART
Pfam:LLGL	275	379	2e-48	PFAM
WD40	424	460	3.2e0	SMART
Blast:WD40	498	540	2e-13	BLAST
Blast:WD40	585	624	4e-9	BLAST
Pfam:Lgl_C	804	976	1.3e-8	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000154141

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000154465

Coding Region Coverage

1x: 99.3%
3x: 98.6%
10x: 97.3%
20x: 95.2%

Validation Efficiency

MGI Phenotype

FUNCTION: This gene encodes a protein with gelsolin-like repeats and an N-terminal leucine-rich repeat domain. The protein is similar to a Drosophila protein involved in early embryogenesis and the structural organization of indirect flight muscle. This protein may act as an actin-remodelling protein as well as a transcriptional coactivator. Homozygous knockout mice show embryonic lethality. This protein may act to regulate wound repair. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Oct 2014]
PHENOTYPE: Embryos homozygous for a knock-out allele are able to initiate uterine implantation but degenerate rapidly thereafter. Heterozygous mutant mice display enhanced wound healing with increased epithelial migration and improved wound contraction. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 83 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2300003K06Rik	A	T	11: 99,728,073 (GRCm39)	C257S	unknown	Het
4930596D02Rik	C	A	14: 35,532,212 (GRCm39)	R121L	probably benign	Het
Aadacl4fm1	T	A	4: 144,248,837 (GRCm39)	M68K	probably benign	Het
Acin1	A	G	14: 54,883,070 (GRCm39)	V194A	probably benign	Het
Acsm1	T	C	7: 119,239,950 (GRCm39)	I298T	possibly damaging	Het
Aoc1	A	G	6: 48,885,681 (GRCm39)	N729D	probably benign	Het
Apobr	C	T	7: 126,186,904 (GRCm39)	T20I	possibly damaging	Het
Arsb	A	G	13: 94,077,106 (GRCm39)	E491G	probably benign	Het
AW209491	C	G	13: 14,811,764 (GRCm39)	Q206E	probably benign	Het
Camsap1	A	T	2: 25,823,630 (GRCm39)	N1473K	probably damaging	Het
Casp8	A	G	1: 58,884,004 (GRCm39)	Q457R	probably benign	Het
Ccdc154	G	A	17: 25,387,315 (GRCm39)	A350T	probably damaging	Het
Cecr2	A	G	6: 120,711,521 (GRCm39)	E183G	probably benign	Het
Cep295	A	T	9: 15,268,925 (GRCm39)	S39T	probably benign	Het
Cep350	A	T	1: 155,811,692 (GRCm39)	I416K	probably damaging	Het
Cidea	C	T	18: 67,500,490 (GRCm39)	T184M	probably damaging	Het
Cnot10	G	A	9: 114,442,803 (GRCm39)	A468V	probably damaging	Het
Cstdc1	A	G	2: 148,625,360 (GRCm39)	Q98R	probably benign	Het
Defb22	A	T	2: 152,327,722 (GRCm39)	N154K	unknown	Het
Dnah17	A	T	11: 117,973,800 (GRCm39)	C1915*	probably null	Het
Dnah2	T	C	11: 69,411,759 (GRCm39)	T288A	possibly damaging	Het
Dop1b	T	A	16: 93,570,891 (GRCm39)	M1512K	probably damaging	Het
Dsp	T	G	13: 38,366,282 (GRCm39)	I572S	probably damaging	Het
Eepd1	A	G	9: 25,498,049 (GRCm39)	H378R	probably benign	Het
Elapor1	A	T	3: 108,380,063 (GRCm39)	Y349N	possibly damaging	Het
Emilin2	A	G	17: 71,580,497 (GRCm39)	M743T	possibly damaging	Het
Ext1	C	A	15: 52,939,213 (GRCm39)	W612L	probably damaging	Het
F2rl2	A	G	13: 95,833,620 (GRCm39)	T17A	probably benign	Het
Fbxl8	T	G	8: 105,993,739 (GRCm39)	C32G	probably damaging	Het
Fbxw17	A	G	13: 50,573,897 (GRCm39)	T38A	probably damaging	Het
Focad	T	G	4: 88,278,121 (GRCm39)	S1197A	unknown	Het
H1f11-ps	A	G	19: 47,159,356 (GRCm39)	V73A	probably damaging	Het
Heatr5b	G	A	17: 79,102,536 (GRCm39)	R1281*	probably null	Het
Khdc3	A	G	9: 73,010,720 (GRCm39)	Q190R	probably benign	Het
Krt9	T	A	11: 100,082,068 (GRCm39)	D244V	probably damaging	Het
Ldhd	T	C	8: 112,353,724 (GRCm39)	E463G	probably benign	Het
Lig4	A	T	8: 10,023,003 (GRCm39)	V259E	possibly damaging	Het
Luc7l3	A	T	11: 94,186,806 (GRCm39)		probably benign	Het
Man1a2	T	C	3: 100,563,579 (GRCm39)	E22G	probably damaging	Het
Mmp23	T	G	4: 155,735,797 (GRCm39)	D258A	probably damaging	Het
Msantd2	C	T	9: 37,434,509 (GRCm39)	R250*	probably null	Het
Mynn	T	C	3: 30,665,738 (GRCm39)	S457P	probably benign	Het
Nectin1	C	T	9: 43,714,795 (GRCm39)	H50Y	probably damaging	Het
Or10a3b	T	C	7: 108,444,906 (GRCm39)	I104V	probably benign	Het
Or2d3c	C	T	7: 106,525,776 (GRCm39)	V297M	possibly damaging	Het
Or4a47	G	A	2: 89,665,578 (GRCm39)	T237I	possibly damaging	Het
Or6c6c	A	G	10: 129,541,026 (GRCm39)	N93S	probably benign	Het
Pfkfb2	G	A	1: 130,629,527 (GRCm39)	T303M	probably damaging	Het
Pkhd1l1	A	G	15: 44,368,705 (GRCm39)	D841G	probably benign	Het
Plxna4	A	T	6: 32,201,094 (GRCm39)		probably null	Het
Podnl1	C	T	8: 84,857,272 (GRCm39)	H294Y	probably benign	Het
Ppig	T	A	2: 69,579,994 (GRCm39)	D509E	unknown	Het
Ppp1r16a	T	A	15: 76,578,596 (GRCm39)	Y433*	probably null	Het
Prdm1	A	C	10: 44,326,221 (GRCm39)	V134G	possibly damaging	Het
Prx	T	C	7: 27,217,901 (GRCm39)	S940P	probably damaging	Het
Ptprd	C	T	4: 75,930,339 (GRCm39)	V731I	probably damaging	Het
Qki	A	G	17: 10,457,820 (GRCm39)		probably null	Het
Rassf6	T	C	5: 90,754,699 (GRCm39)	K206R	possibly damaging	Het
Rdh16f2	G	A	10: 127,712,124 (GRCm39)	E194K	possibly damaging	Het
Rims1	C	A	1: 22,522,328 (GRCm39)	G457*	probably null	Het
Ripk1	T	G	13: 34,197,279 (GRCm39)	I123R	probably damaging	Het
Rnf111	A	T	9: 70,383,422 (GRCm39)	S170R	probably benign	Het
Shc3	A	T	13: 51,615,413 (GRCm39)	F181L	probably damaging	Het
Siglec1	A	C	2: 130,927,497 (GRCm39)	V103G	probably damaging	Het
Slc26a11	G	T	11: 119,268,085 (GRCm39)	A488S	possibly damaging	Het
Smoc2	A	T	17: 14,556,841 (GRCm39)	T97S	probably damaging	Het
Son	T	C	16: 91,451,910 (GRCm39)	I219T	possibly damaging	Het
Sptbn1	A	T	11: 30,071,510 (GRCm39)	I1474N	possibly damaging	Het
Syt16	A	T	12: 74,269,542 (GRCm39)	D127V	possibly damaging	Het
Tet1	G	T	10: 62,714,357 (GRCm39)	N479K	possibly damaging	Het
Thsd7a	G	A	6: 12,338,654 (GRCm39)	A1192V	probably benign	Het
Tmed3	G	A	9: 89,581,825 (GRCm39)	R213*	probably null	Het
Traj57	A	G	14: 54,396,016 (GRCm39)		probably benign	Het
Trpv1	G	T	11: 73,129,342 (GRCm39)	R86S	probably benign	Het
Usp48	T	A	4: 137,343,673 (GRCm39)	F434L	possibly damaging	Het
Vmn2r59	A	C	7: 41,691,834 (GRCm39)		probably null	Het
Vmn2r71	T	A	7: 85,268,430 (GRCm39)	I211N	possibly damaging	Het
Vps13b	T	A	15: 35,422,599 (GRCm39)	D186E	probably damaging	Het
Vps33a	A	G	5: 123,696,691 (GRCm39)	S321P	probably damaging	Het
Wdr12	A	T	1: 60,133,670 (GRCm39)	D19E	probably benign	Het
Zc3h12c	A	G	9: 52,037,947 (GRCm39)	F278L	probably damaging	Het
Zpld1	T	C	16: 55,067,007 (GRCm39)	T183A	probably damaging	Het
Zswim2	G	T	2: 83,770,010 (GRCm39)	T68K	possibly damaging	Het

Other mutations in Flii

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00225:Flii	APN	11	60,614,241 (GRCm39)	missense	probably benign	0.03
IGL00331:Flii	APN	11	60,606,659 (GRCm39)	missense	probably benign	0.40
IGL01530:Flii	APN	11	60,611,008 (GRCm39)	nonsense	probably null
IGL01678:Flii	APN	11	60,607,672 (GRCm39)	unclassified	probably benign
IGL01938:Flii	APN	11	60,605,942 (GRCm39)	missense	probably damaging	1.00
IGL02211:Flii	APN	11	60,609,124 (GRCm39)	unclassified	probably benign
IGL02626:Flii	APN	11	60,610,685 (GRCm39)	missense	probably benign	0.37
IGL03038:Flii	APN	11	60,615,658 (GRCm39)	missense	probably benign	0.01
IGL03412:Flii	APN	11	60,613,466 (GRCm39)	missense	probably damaging	0.99
R0135:Flii	UTSW	11	60,614,204 (GRCm39)	missense	probably damaging	0.99
R0350:Flii	UTSW	11	60,612,683 (GRCm39)	missense	probably damaging	1.00
R0355:Flii	UTSW	11	60,610,506 (GRCm39)	splice site	probably null
R0524:Flii	UTSW	11	60,610,887 (GRCm39)	missense	probably damaging	0.98
R0636:Flii	UTSW	11	60,606,378 (GRCm39)	missense	probably damaging	1.00
R0639:Flii	UTSW	11	60,613,823 (GRCm39)	splice site	probably null
R1515:Flii	UTSW	11	60,612,432 (GRCm39)	critical splice acceptor site	probably null
R1544:Flii	UTSW	11	60,610,518 (GRCm39)	critical splice donor site	probably null
R1782:Flii	UTSW	11	60,605,462 (GRCm39)	missense	probably benign
R2922:Flii	UTSW	11	60,609,742 (GRCm39)	missense	probably damaging	1.00
R3691:Flii	UTSW	11	60,610,583 (GRCm39)	missense	probably benign	0.03
R3753:Flii	UTSW	11	60,606,306 (GRCm39)	missense	probably benign
R3875:Flii	UTSW	11	60,611,318 (GRCm39)	missense	probably benign
R3876:Flii	UTSW	11	60,610,698 (GRCm39)	missense	possibly damaging	0.85
R3924:Flii	UTSW	11	60,610,902 (GRCm39)	missense	probably damaging	1.00
R4621:Flii	UTSW	11	60,606,937 (GRCm39)	missense	possibly damaging	0.95
R4789:Flii	UTSW	11	60,605,919 (GRCm39)	missense	probably benign	0.33
R5326:Flii	UTSW	11	60,609,688 (GRCm39)	missense	probably benign	0.30
R5340:Flii	UTSW	11	60,608,094 (GRCm39)	missense	probably damaging	0.99
R5364:Flii	UTSW	11	60,610,954 (GRCm39)	missense	probably benign	0.00
R5542:Flii	UTSW	11	60,609,688 (GRCm39)	missense	probably benign	0.30
R5592:Flii	UTSW	11	60,611,225 (GRCm39)	missense	probably benign	0.00
R5859:Flii	UTSW	11	60,607,137 (GRCm39)	nonsense	probably null
R5968:Flii	UTSW	11	60,611,038 (GRCm39)	missense	probably benign
R6009:Flii	UTSW	11	60,611,583 (GRCm39)	nonsense	probably null
R6287:Flii	UTSW	11	60,612,423 (GRCm39)	missense	probably damaging	1.00
R6368:Flii	UTSW	11	60,611,962 (GRCm39)	missense	probably damaging	1.00
R6997:Flii	UTSW	11	60,613,151 (GRCm39)	missense	probably benign	0.14
R7099:Flii	UTSW	11	60,611,481 (GRCm39)	missense	probably benign	0.05
R7324:Flii	UTSW	11	60,609,866 (GRCm39)	missense	probably benign
R7366:Flii	UTSW	11	60,611,945 (GRCm39)	missense	possibly damaging	0.67
R7371:Flii	UTSW	11	60,609,090 (GRCm39)	missense	probably benign	0.41
R7571:Flii	UTSW	11	60,611,962 (GRCm39)	missense	probably damaging	1.00
R7669:Flii	UTSW	11	60,613,490 (GRCm39)	missense	probably damaging	1.00
R7677:Flii	UTSW	11	60,610,971 (GRCm39)	missense	probably damaging	0.99
R7698:Flii	UTSW	11	60,610,918 (GRCm39)	missense	probably damaging	1.00
R8485:Flii	UTSW	11	60,607,063 (GRCm39)	missense	probably benign
R8821:Flii	UTSW	11	60,616,074 (GRCm39)	missense	probably benign	0.00
R8831:Flii	UTSW	11	60,616,074 (GRCm39)	missense	probably benign	0.00
R8839:Flii	UTSW	11	60,609,433 (GRCm39)	missense	possibly damaging	0.82
R9380:Flii	UTSW	11	60,606,297 (GRCm39)	missense	probably benign	0.23
R9448:Flii	UTSW	11	60,606,393 (GRCm39)	missense	probably benign	0.04
R9598:Flii	UTSW	11	60,617,991 (GRCm39)	missense	probably benign	0.01
RF011:Flii	UTSW	11	60,607,069 (GRCm39)	missense	probably benign	0.04
X0025:Flii	UTSW	11	60,612,534 (GRCm39)	missense	possibly damaging	0.62
Z1176:Flii	UTSW	11	60,613,139 (GRCm39)	missense	possibly damaging	0.69

Predicted Primers

PCR Primer
(F):5'- TGGCAGTCGAGTGAACTTGC -3'
(R):5'- ATGGCATTACACTGTTCAACAC -3'

Sequencing Primer
(F):5'- AGTGAACTTGCGGCCCTC -3'
(R):5'- CACAGGTGTTCAAGGCCAAGTTC -3'

Posted On

2016-06-21