Mutagenetix > Incidental Mutation

Incidental Mutation 'R5095:Gm5414'

395847

Institutional Source

Beutler Lab

Gene Symbol

Gm5414

Ensembl Gene

ENSMUSG00000064232

Gene Name

predicted gene 5414

Synonyms

MMRRC Submission

042684-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.136) question?

Stock #

R5095 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

101532463-101536623 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to G at 101532473 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Asparagine to Threonine at position 550 (N550T)

Ref Sequence

ENSEMBL: ENSMUSP00000059101 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000062879]

AlphaFold

Q6IFZ8

Predicted Effect

probably benign
Transcript: ENSMUST00000062879
AA Change: N550T

PolyPhen 2 Score 0.015 (Sensitivity: 0.96; Specificity: 0.79)

SMART Domains

Protein: ENSMUSP00000059101
Gene: ENSMUSG00000064232
AA Change: N550T

Domain	Start	End	E-Value	Type
Pfam:Keratin_2_head	15	148	3.3e-29	PFAM
Filament	151	464	1.4e-143	SMART
low complexity region	489	507	N/A	INTRINSIC
low complexity region	511	549	N/A	INTRINSIC

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 99.3%
3x: 98.7%
10x: 97.4%
20x: 95.5%

Validation Efficiency

98% (59/60)

Allele List at MGI

Other mutations in this stock

Total: 53 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700021A07Rik	G	C	10: 21,301,492 (GRCm39)		noncoding transcript	Het
Adgrv1	C	T	13: 81,243,606 (GRCm39)	V6265I	probably benign	Het
Agbl1	G	A	7: 76,369,881 (GRCm39)	G660D	probably damaging	Het
Arap2	A	G	5: 62,811,392 (GRCm39)	Y1140H	probably damaging	Het
Atp6v1c1	T	C	15: 38,679,657 (GRCm39)		probably null	Het
C1rb	A	T	6: 124,557,272 (GRCm39)	R470W	possibly damaging	Het
Caskin2	T	C	11: 115,691,564 (GRCm39)	T1074A	probably benign	Het
Cdh19	T	A	1: 110,882,391 (GRCm39)	T34S	probably benign	Het
Csnk1a1	T	A	18: 61,708,547 (GRCm39)	Y175N	probably damaging	Het
F2	CAGAAAG	CAG	2: 91,465,302 (GRCm39)		probably benign	Het
Flt4	T	A	11: 49,517,986 (GRCm39)	V342D	possibly damaging	Het
Frmd5	A	T	2: 121,379,402 (GRCm39)	C394S	possibly damaging	Het
Hcn3	C	A	3: 89,057,230 (GRCm39)	R456L	probably damaging	Het
Htt	T	C	5: 34,981,739 (GRCm39)	V893A	possibly damaging	Het
Ift46	A	G	9: 44,698,146 (GRCm39)	D203G	probably damaging	Het
Itga10	G	T	3: 96,555,480 (GRCm39)	V145L	probably benign	Het
Kcnh6	A	G	11: 105,908,080 (GRCm39)	D232G	possibly damaging	Het
Mbtd1	T	C	11: 93,820,497 (GRCm39)	S431P	probably damaging	Het
Mmp27	T	A	9: 7,572,159 (GRCm39)	W120R	probably damaging	Het
Mmp27	A	T	9: 7,579,001 (GRCm39)	D418V	probably damaging	Het
Myo5a	A	G	9: 75,059,302 (GRCm39)	D510G	probably damaging	Het
Myo5a	A	T	9: 75,091,671 (GRCm39)	K1179*	probably null	Het
Neto1	T	C	18: 86,416,406 (GRCm39)	S38P	probably benign	Het
Nos3	A	G	5: 24,573,916 (GRCm39)		probably benign	Het
Nuggc	C	T	14: 65,872,539 (GRCm39)	R512*	probably null	Het
Oas1e	T	A	5: 120,932,329 (GRCm39)	K105*	probably null	Het
Omd	T	A	13: 49,743,174 (GRCm39)	S75T	possibly damaging	Het
Or10a3m	T	C	7: 108,313,019 (GRCm39)	F141S	probably damaging	Het
Or2n1c	A	C	17: 38,519,208 (GRCm39)	E24A	possibly damaging	Het
Pbrm1	A	G	14: 30,754,487 (GRCm39)	N190S	probably benign	Het
Picalm	T	C	7: 89,819,841 (GRCm39)	F85L	probably damaging	Het
Polg	A	G	7: 79,110,048 (GRCm39)	V360A	possibly damaging	Het
Prex1	T	C	2: 166,423,841 (GRCm39)	D1017G	probably damaging	Het
Prss56	G	C	1: 87,115,833 (GRCm39)	R569P	probably damaging	Het
Rab6b	G	A	9: 103,017,583 (GRCm39)	G25R	probably damaging	Het
Rdh10	A	G	1: 16,201,609 (GRCm39)	T332A	probably benign	Het
Rheb	A	T	5: 25,012,639 (GRCm39)	M115K	probably benign	Het
Rnf149	A	T	1: 39,594,737 (GRCm39)	D321E	probably benign	Het
Rps28	C	T	17: 34,042,177 (GRCm39)		probably null	Het
Slc6a20b	A	G	9: 123,424,119 (GRCm39)	V616A	probably benign	Het
Smarcc2	A	G	10: 128,305,169 (GRCm39)	K300R	probably damaging	Het
Sparcl1	C	T	5: 104,233,629 (GRCm39)	M573I	probably damaging	Het
Spata31h1	G	T	10: 82,119,501 (GRCm39)	A4503E	probably damaging	Het
Srp68	C	T	11: 116,139,573 (GRCm39)	V459M	probably damaging	Het
Stxbp4	C	T	11: 90,439,801 (GRCm39)	V346I	probably benign	Het
Syne2	A	G	12: 75,999,600 (GRCm39)	D2331G	probably damaging	Het
Ttn	A	T	2: 76,564,536 (GRCm39)	Y28534N	probably damaging	Het
Usp44	A	T	10: 93,682,707 (GRCm39)	I386F	possibly damaging	Het
Vmn2r15	T	C	5: 109,436,317 (GRCm39)		probably null	Het
Vmn2r72	T	A	7: 85,387,061 (GRCm39)	L834F	probably damaging	Het
Vps13b	T	A	15: 35,923,348 (GRCm39)	I3741K	probably damaging	Het
Zdbf2	A	G	1: 63,348,232 (GRCm39)	T2204A	possibly damaging	Het
Zfp607b	T	A	7: 27,393,061 (GRCm39)		probably benign	Het

Other mutations in Gm5414

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01011:Gm5414	APN	15	101,536,569 (GRCm39)	missense	probably benign	0.00
IGL01774:Gm5414	APN	15	101,535,410 (GRCm39)	missense	probably benign	0.13
IGL01939:Gm5414	APN	15	101,534,105 (GRCm39)	splice site	probably benign
IGL02205:Gm5414	APN	15	101,534,304 (GRCm39)	missense	probably benign	0.44
IGL02411:Gm5414	APN	15	101,536,269 (GRCm39)	missense	probably benign	0.05
IGL02720:Gm5414	APN	15	101,533,990 (GRCm39)	missense	probably damaging	1.00
IGL02900:Gm5414	APN	15	101,536,242 (GRCm39)	missense	probably damaging	0.99
IGL03283:Gm5414	APN	15	101,535,522 (GRCm39)	missense	probably damaging	1.00
PIT4480001:Gm5414	UTSW	15	101,536,181 (GRCm39)	missense	probably damaging	1.00
PIT4504001:Gm5414	UTSW	15	101,534,258 (GRCm39)	missense	probably damaging	0.98
R1905:Gm5414	UTSW	15	101,533,075 (GRCm39)	missense	probably damaging	1.00
R2070:Gm5414	UTSW	15	101,536,495 (GRCm39)	missense	possibly damaging	0.52
R3011:Gm5414	UTSW	15	101,534,047 (GRCm39)	missense	probably damaging	1.00
R3033:Gm5414	UTSW	15	101,533,044 (GRCm39)	missense	probably damaging	1.00
R4074:Gm5414	UTSW	15	101,533,988 (GRCm39)	missense	probably benign
R4257:Gm5414	UTSW	15	101,533,107 (GRCm39)	missense	probably damaging	1.00
R4396:Gm5414	UTSW	15	101,534,101 (GRCm39)	missense	probably damaging	1.00
R4648:Gm5414	UTSW	15	101,536,543 (GRCm39)	missense	possibly damaging	0.72
R4912:Gm5414	UTSW	15	101,533,445 (GRCm39)	missense	possibly damaging	0.46
R5135:Gm5414	UTSW	15	101,536,203 (GRCm39)	missense	probably damaging	0.97
R5177:Gm5414	UTSW	15	101,534,252 (GRCm39)	missense	possibly damaging	0.91
R5330:Gm5414	UTSW	15	101,533,099 (GRCm39)	missense	probably damaging	1.00
R5331:Gm5414	UTSW	15	101,533,099 (GRCm39)	missense	probably damaging	1.00
R5432:Gm5414	UTSW	15	101,533,069 (GRCm39)	missense	probably damaging	1.00
R5521:Gm5414	UTSW	15	101,536,422 (GRCm39)	missense	probably benign	0.33
R5623:Gm5414	UTSW	15	101,534,246 (GRCm39)	missense	probably damaging	1.00
R6781:Gm5414	UTSW	15	101,534,096 (GRCm39)	missense	possibly damaging	0.91
R8298:Gm5414	UTSW	15	101,532,605 (GRCm39)	missense	unknown
R8912:Gm5414	UTSW	15	101,536,620 (GRCm39)	missense	possibly damaging	0.94
R9092:Gm5414	UTSW	15	101,536,345 (GRCm39)	missense	probably benign	0.01
R9721:Gm5414	UTSW	15	101,536,582 (GRCm39)	nonsense	probably null
RF001:Gm5414	UTSW	15	101,536,388 (GRCm39)	missense	probably benign

Predicted Primers

PCR Primer
(F):5'- ATTGTACACCAGCCCTAAATTTCTC -3'
(R):5'- CTATGACAGTGCAGGTGGTG -3'

Sequencing Primer
(F):5'- TACACCAGCCCTAAATTTCTCATAAG -3'
(R):5'- GCGAACAGAAACCATGGCCTG -3'

Posted On

2016-06-21