Incidental Mutation 'R5132:Or5e1'
| ID |
395872 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or5e1
|
| Ensembl Gene |
ENSMUSG00000051200 |
| Gene Name |
olfactory receptor family 5 subfamily E member 1 |
| Synonyms |
GA_x6K02T2PBJ9-11084889-11085818, Olfr513, MOR195-1 |
| MMRRC Submission |
042720-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.189)
|
| Stock # |
R5132 (G1)
|
| Quality Score |
225 |
|
Status
|
Validated
|
| Chromosome |
7 |
| Chromosomal Location |
108354065-108354994 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to C
at 108354477 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Valine to Alanine
at position 138
(V138A)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000149440
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000055146]
[ENSMUST00000214670]
|
| AlphaFold |
Q8VFZ3 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000055146
AA Change: V138A
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
| SMART Domains |
Protein: ENSMUSP00000050578
Gene: ENSMUSG00000051200
AA Change: V138A
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
28 |
307 |
2.7e-55 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
33 |
304 |
2.3e-6 |
PFAM |
|
Pfam:7tm_1
|
39 |
289 |
2.8e-20 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000214670
AA Change: V138A
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
| Meta Mutation Damage Score |
0.6467 |
| Coding Region Coverage |
- 1x: 99.3%
- 3x: 98.6%
- 10x: 97.2%
- 20x: 94.8%
|
| Validation Efficiency |
100% (41/41) |
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 37 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Abl2 |
A |
T |
1: 156,469,402 (GRCm39) |
K785* |
probably null |
Het |
| Acad11 |
A |
T |
9: 104,003,791 (GRCm39) |
I628L |
probably benign |
Het |
| Ago1 |
T |
C |
4: 126,355,516 (GRCm39) |
I98V |
probably benign |
Het |
| Bach2 |
A |
G |
4: 32,563,396 (GRCm39) |
|
probably benign |
Het |
| Calr3 |
C |
T |
8: 73,185,212 (GRCm39) |
|
probably null |
Het |
| Cdc23 |
C |
A |
18: 34,784,742 (GRCm39) |
V7L |
unknown |
Het |
| Cdc42ep3 |
C |
T |
17: 79,642,803 (GRCm39) |
R39H |
probably damaging |
Het |
| Cyp2j5 |
T |
C |
4: 96,517,733 (GRCm39) |
Y493C |
probably damaging |
Het |
| Ddx19b |
A |
T |
8: 111,749,040 (GRCm39) |
D66E |
probably benign |
Het |
| Drosha |
A |
G |
15: 12,837,377 (GRCm39) |
D287G |
unknown |
Het |
| Gm8888 |
A |
G |
15: 96,664,892 (GRCm39) |
|
noncoding transcript |
Het |
| Gpr25 |
G |
T |
1: 136,188,103 (GRCm39) |
A170E |
probably damaging |
Het |
| Gria1 |
A |
G |
11: 57,180,225 (GRCm39) |
Y656C |
probably damaging |
Het |
| Grik5 |
C |
T |
7: 24,764,629 (GRCm39) |
V145I |
probably benign |
Het |
| Htt |
T |
C |
5: 35,063,023 (GRCm39) |
V2885A |
possibly damaging |
Het |
| Larp6 |
A |
G |
9: 60,644,493 (GRCm39) |
E211G |
probably damaging |
Het |
| Magi1 |
C |
A |
6: 93,660,072 (GRCm39) |
|
probably null |
Het |
| Mtbp |
A |
G |
15: 55,421,965 (GRCm39) |
S63G |
possibly damaging |
Het |
| Ndor1 |
A |
T |
2: 25,137,781 (GRCm39) |
S513T |
probably benign |
Het |
| Nsd3 |
A |
G |
8: 26,168,855 (GRCm39) |
D670G |
possibly damaging |
Het |
| Or10ag56 |
A |
T |
2: 87,139,282 (GRCm39) |
M50L |
probably damaging |
Het |
| Or4k49 |
T |
A |
2: 111,495,344 (GRCm39) |
Y258N |
probably damaging |
Het |
| Pcdh7 |
T |
C |
5: 57,885,463 (GRCm39) |
V1061A |
probably benign |
Het |
| Pdia4 |
A |
G |
6: 47,773,669 (GRCm39) |
I560T |
probably benign |
Het |
| Pomt2 |
A |
G |
12: 87,157,121 (GRCm39) |
F733L |
probably damaging |
Het |
| Pprc1 |
T |
C |
19: 46,061,121 (GRCm39) |
|
probably benign |
Het |
| Prkca |
T |
C |
11: 108,082,943 (GRCm39) |
|
probably benign |
Het |
| Pspc1 |
A |
T |
14: 56,960,707 (GRCm39) |
S473T |
probably benign |
Het |
| Rgs12 |
A |
G |
5: 35,147,156 (GRCm39) |
|
probably benign |
Het |
| Scn3a |
C |
T |
2: 65,298,548 (GRCm39) |
V1384I |
probably benign |
Het |
| Serpinb6a |
C |
T |
13: 34,102,305 (GRCm39) |
D307N |
probably benign |
Het |
| Smap2 |
T |
C |
4: 120,830,370 (GRCm39) |
E255G |
possibly damaging |
Het |
| Spmip6 |
A |
G |
4: 41,517,178 (GRCm39) |
|
probably benign |
Het |
| St7 |
A |
T |
6: 17,854,956 (GRCm39) |
I298F |
probably damaging |
Het |
| Tgm7 |
A |
G |
2: 120,934,700 (GRCm39) |
F93L |
probably damaging |
Het |
| Timm23 |
A |
T |
14: 31,915,902 (GRCm39) |
D56E |
probably damaging |
Het |
| Tmem170 |
A |
T |
8: 112,596,357 (GRCm39) |
M56K |
probably benign |
Het |
|
| Other mutations in Or5e1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02491:Or5e1
|
APN |
7 |
108,354,321 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03086:Or5e1
|
APN |
7 |
108,355,003 (GRCm39) |
utr 3 prime |
probably benign |
|
|
FR4340:Or5e1
|
UTSW |
7 |
108,354,161 (GRCm39) |
small insertion |
probably benign |
|
|
IGL02799:Or5e1
|
UTSW |
7 |
108,354,830 (GRCm39) |
missense |
probably benign |
|
|
R0218:Or5e1
|
UTSW |
7 |
108,354,781 (GRCm39) |
nonsense |
probably null |
|
|
R1103:Or5e1
|
UTSW |
7 |
108,354,090 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
R1251:Or5e1
|
UTSW |
7 |
108,354,114 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1450:Or5e1
|
UTSW |
7 |
108,354,719 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1582:Or5e1
|
UTSW |
7 |
108,354,317 (GRCm39) |
missense |
probably benign |
0.04 |
|
R1608:Or5e1
|
UTSW |
7 |
108,354,309 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1726:Or5e1
|
UTSW |
7 |
108,354,215 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1880:Or5e1
|
UTSW |
7 |
108,354,335 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1881:Or5e1
|
UTSW |
7 |
108,354,335 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2136:Or5e1
|
UTSW |
7 |
108,354,430 (GRCm39) |
missense |
possibly damaging |
0.58 |
|
R2216:Or5e1
|
UTSW |
7 |
108,354,819 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4006:Or5e1
|
UTSW |
7 |
108,354,468 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4603:Or5e1
|
UTSW |
7 |
108,354,834 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4881:Or5e1
|
UTSW |
7 |
108,354,612 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5426:Or5e1
|
UTSW |
7 |
108,354,924 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R5679:Or5e1
|
UTSW |
7 |
108,354,203 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R5848:Or5e1
|
UTSW |
7 |
108,354,781 (GRCm39) |
nonsense |
probably null |
|
|
R5911:Or5e1
|
UTSW |
7 |
108,354,882 (GRCm39) |
missense |
probably benign |
0.36 |
|
R6474:Or5e1
|
UTSW |
7 |
108,354,236 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7016:Or5e1
|
UTSW |
7 |
108,354,918 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7783:Or5e1
|
UTSW |
7 |
108,354,776 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8113:Or5e1
|
UTSW |
7 |
108,354,438 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8385:Or5e1
|
UTSW |
7 |
108,354,511 (GRCm39) |
nonsense |
probably null |
|
|
R9429:Or5e1
|
UTSW |
7 |
108,354,412 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R9746:Or5e1
|
UTSW |
7 |
108,354,639 (GRCm39) |
missense |
probably benign |
|
|
Z1088:Or5e1
|
UTSW |
7 |
108,354,311 (GRCm39) |
missense |
probably benign |
0.13 |
|
| Predicted Primers |
PCR Primer
(F):5'- GGCTTCACACGCCAATGTAC -3'
(R):5'- GATCAGAAGCTGCCTCTCTTTG -3'
Sequencing Primer
(F):5'- CTTCCATTGGGCCAAAAATGCTG -3'
(R):5'- CAGAAGCTGCCTCTCTTTGTTGTG -3'
|
| Posted On |
2016-06-21 |
Incidental Mutation