Mutagenetix > Incidental Mutation

Incidental Mutation 'R5237:Rsrc2'

398510

Institutional Source

Beutler Lab

Gene Symbol

Rsrc2

Ensembl Gene

ENSMUSG00000029422

Gene Name

arginine/serine-rich coiled-coil 2

Synonyms

1500011J06Rik

MMRRC Submission

042808-MU

Accession Numbers

Essential gene?

Probably essential (E-score: 0.932) question?

Stock #

R5237 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

123866489-123887477 bp(-) (GRCm39)

Type of Mutation

utr 5 prime

DNA Base Change (assembly)

T to C at 123877645 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000138301 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000050827] [ENSMUST00000057795] [ENSMUST00000111515] [ENSMUST00000182015] [ENSMUST00000182093] [ENSMUST00000182241] [ENSMUST00000182309] [ENSMUST00000182489] [ENSMUST00000182556] [ENSMUST00000182955] [ENSMUST00000183147] [ENSMUST00000182411]

AlphaFold

A2RTL5

Predicted Effect

unknown
Transcript: ENSMUST00000050827
AA Change: D112G

SMART Domains

Protein: ENSMUSP00000050563
Gene: ENSMUSG00000029422
AA Change: D112G

Domain	Start	End	E-Value	Type
low complexity region	36	54	N/A	INTRINSIC
low complexity region	108	208	N/A	INTRINSIC
low complexity region	209	226	N/A	INTRINSIC
coiled coil region	228	272	N/A	INTRINSIC
low complexity region	294	308	N/A	INTRINSIC
Pfam:SMAP	354	423	6.7e-21	PFAM

Predicted Effect

unknown
Transcript: ENSMUST00000057795
AA Change: D112G

SMART Domains

Protein: ENSMUSP00000049942
Gene: ENSMUSG00000029422
AA Change: D112G

Domain	Start	End	E-Value	Type
low complexity region	50	150	N/A	INTRINSIC
low complexity region	151	168	N/A	INTRINSIC
coiled coil region	170	214	N/A	INTRINSIC
low complexity region	236	250	N/A	INTRINSIC
Pfam:SMAP	295	365	4.7e-16	PFAM

Predicted Effect

unknown
Transcript: ENSMUST00000111515
AA Change: D112G

SMART Domains

Protein: ENSMUSP00000107140
Gene: ENSMUSG00000029422
AA Change: D112G

Domain	Start	End	E-Value	Type
low complexity region	50	150	N/A	INTRINSIC
low complexity region	151	168	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000181980

Predicted Effect

probably benign
Transcript: ENSMUST00000182015

SMART Domains

Protein: ENSMUSP00000138210
Gene: ENSMUSG00000029422

Domain	Start	End	E-Value	Type
low complexity region	36	69	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000182093

Predicted Effect

probably benign
Transcript: ENSMUST00000182241

SMART Domains

Protein: ENSMUSP00000138162
Gene: ENSMUSG00000029422

Domain	Start	End	E-Value	Type
low complexity region	36	69	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000182744

Predicted Effect

unknown
Transcript: ENSMUST00000182309
AA Change: D170G

SMART Domains

Protein: ENSMUSP00000138691
Gene: ENSMUSG00000029422
AA Change: D170G

Domain	Start	End	E-Value	Type
low complexity region	36	54	N/A	INTRINSIC
low complexity region	108	208	N/A	INTRINSIC
low complexity region	209	226	N/A	INTRINSIC
coiled coil region	228	272	N/A	INTRINSIC
low complexity region	294	308	N/A	INTRINSIC
Pfam:SMAP	353	423	4.7e-16	PFAM

Predicted Effect

unknown
Transcript: ENSMUST00000182489
AA Change: D123G

SMART Domains

Protein: ENSMUSP00000138518
Gene: ENSMUSG00000029422
AA Change: D123G

Domain	Start	End	E-Value	Type
internal_repeat_1	10	46	8.8e-5	PROSPERO
low complexity region	61	161	N/A	INTRINSIC
low complexity region	162	179	N/A	INTRINSIC
coiled coil region	181	225	N/A	INTRINSIC
low complexity region	247	261	N/A	INTRINSIC
Pfam:SMAP	306	376	4e-16	PFAM

Predicted Effect

unknown
Transcript: ENSMUST00000182556
AA Change: D112G

SMART Domains

Protein: ENSMUSP00000138631
Gene: ENSMUSG00000029422
AA Change: D112G

Domain	Start	End	E-Value	Type
low complexity region	50	150	N/A	INTRINSIC
low complexity region	151	168	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000182948

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000182809

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000182968

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000182542

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000182612

Predicted Effect

probably benign
Transcript: ENSMUST00000182584

Predicted Effect

probably benign
Transcript: ENSMUST00000182955

SMART Domains

Protein: ENSMUSP00000138280
Gene: ENSMUSG00000029422

Domain	Start	End	E-Value	Type
coiled coil region	1	41	N/A	INTRINSIC
low complexity region	63	77	N/A	INTRINSIC
Pfam:SMAP	122	192	1.8e-16	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000183147

Predicted Effect

probably benign
Transcript: ENSMUST00000182861

Predicted Effect

probably benign
Transcript: ENSMUST00000182411

SMART Domains

Protein: ENSMUSP00000138439
Gene: ENSMUSG00000029422

Domain	Start	End	E-Value	Type
low complexity region	36	54	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000183253

Meta Mutation Damage Score

0.0660

Coding Region Coverage

1x: 99.2%
3x: 98.5%
10x: 96.9%
20x: 94.5%

Validation Efficiency

100% (76/76)

Allele List at MGI

Other mutations in this stock

Total: 66 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Aadacl4	G	A	4: 144,349,850 (GRCm39)	W369*	probably null	Het
Adamts3	A	T	5: 89,923,236 (GRCm39)	M190K	probably benign	Het
Adamtsl1	T	C	4: 86,303,906 (GRCm39)		probably null	Het
Adcy1	A	T	11: 7,099,553 (GRCm39)	I678L	probably benign	Het
Agtrap	A	G	4: 148,166,817 (GRCm39)	S27P	probably benign	Het
Ankrd24	C	A	10: 81,478,379 (GRCm39)		probably benign	Het
Atg2a	G	T	19: 6,296,844 (GRCm39)	V383L	probably benign	Het
Ccdc40	T	C	11: 119,150,802 (GRCm39)	V1105A	probably benign	Het
Cenpf	A	T	1: 189,391,730 (GRCm39)	S684T	probably benign	Het
Cog7	A	G	7: 121,550,444 (GRCm39)	L360P	probably damaging	Het
Col12a1	T	A	9: 79,607,544 (GRCm39)	Q428L	probably benign	Het
Col4a1	G	A	8: 11,295,068 (GRCm39)		probably benign	Het
Cpeb2	G	A	5: 43,443,099 (GRCm39)	C930Y	probably damaging	Het
Cul9	T	C	17: 46,854,393 (GRCm39)	D103G	probably benign	Het
Cyb5a	T	G	18: 84,889,689 (GRCm39)	F39L	probably damaging	Het
Cyp2d12	T	A	15: 82,442,207 (GRCm39)		probably null	Het
Dnah7a	A	C	1: 53,486,690 (GRCm39)		probably null	Het
Efcab9	A	T	11: 32,472,832 (GRCm39)	I205K	probably benign	Het
Ezh1	A	G	11: 101,107,819 (GRCm39)		probably null	Het
Galnt6	C	A	15: 100,591,274 (GRCm39)	C610F	probably damaging	Het
Gata4	C	T	14: 63,478,075 (GRCm39)	A175T	probably benign	Het
Gcc1	A	T	6: 28,420,651 (GRCm39)	I222K	probably benign	Het
Gm5591	T	A	7: 38,221,631 (GRCm39)	H146L	probably benign	Het
H2-T23	C	T	17: 36,341,258 (GRCm39)		probably null	Het
Hmcn2	T	A	2: 31,304,728 (GRCm39)	I3124N	probably benign	Het
Hsf2	C	A	10: 57,382,317 (GRCm39)	D364E	probably benign	Het
Il15ra	A	G	2: 11,738,016 (GRCm39)	T250A	possibly damaging	Het
Large2	T	C	2: 92,197,487 (GRCm39)	E372G	probably benign	Het
Map2	A	G	1: 66,478,169 (GRCm39)		probably benign	Het
Med24	T	C	11: 98,601,609 (GRCm39)	Y524C	probably damaging	Het
Mfsd6l	C	A	11: 68,448,096 (GRCm39)	Q316K	probably benign	Het
Mroh6	T	C	15: 75,757,840 (GRCm39)	T417A	possibly damaging	Het
Mymk	T	C	2: 26,952,200 (GRCm39)	*181W	probably null	Het
Nup210l	A	G	3: 90,087,505 (GRCm39)	T1093A	probably benign	Het
Or10al4	T	A	17: 38,037,268 (GRCm39)	C118S	probably damaging	Het
Or10p1	A	G	10: 129,443,732 (GRCm39)	V206A	probably benign	Het
Or52w1	A	T	7: 105,018,513 (GRCm39)	K327*	probably null	Het
Or8b54	C	T	9: 38,687,252 (GRCm39)	R234W	probably damaging	Het
Papola	T	C	12: 105,793,219 (GRCm39)	V513A	probably benign	Het
Pex26	T	A	6: 121,162,806 (GRCm39)	L119Q	probably damaging	Het
Phldb2	T	C	16: 45,568,249 (GRCm39)	I1219V	probably damaging	Het
Plch2	A	G	4: 155,095,251 (GRCm39)	V64A	probably benign	Het
Plekho1	A	G	3: 95,902,937 (GRCm39)	V24A	probably damaging	Het
Pon2	A	C	6: 5,265,455 (GRCm39)	S311A	probably benign	Het
Pramel31	G	T	4: 144,089,041 (GRCm39)	E120*	probably null	Het
Selenov	T	C	7: 27,987,572 (GRCm39)	D295G	probably damaging	Het
Serpina10	T	A	12: 103,595,075 (GRCm39)	Y48F	probably benign	Het
Setbp1	T	A	18: 78,900,190 (GRCm39)	D1159V	possibly damaging	Het
Setx	C	T	2: 29,036,995 (GRCm39)	T1160I	probably benign	Het
Sin3b	A	C	8: 73,459,971 (GRCm39)		probably null	Het
Skint11	A	G	4: 114,102,042 (GRCm39)	K352E	possibly damaging	Het
Slitrk5	T	A	14: 111,919,118 (GRCm39)	V914E	possibly damaging	Het
Srgap1	A	G	10: 121,643,788 (GRCm39)	Y633H	probably damaging	Het
Stard9	A	G	2: 120,529,839 (GRCm39)	D2032G	probably damaging	Het
Sv2c	G	A	13: 96,118,391 (GRCm39)	T486I	possibly damaging	Het
Tesk1	T	C	4: 43,447,100 (GRCm39)	F496S	probably damaging	Het
Tfg	T	A	16: 56,533,071 (GRCm39)	E29D	possibly damaging	Het
Tnc	G	A	4: 63,880,333 (GRCm39)	T2038I	probably damaging	Het
Tor4a	T	G	2: 25,084,976 (GRCm39)	N309T	probably damaging	Het
Trim69	A	G	2: 122,003,821 (GRCm39)	T257A	probably benign	Het
Trpm6	C	T	19: 18,790,828 (GRCm39)	A621V	probably damaging	Het
Ttn	A	T	2: 76,641,587 (GRCm39)	L5176Q	possibly damaging	Het
Vmn1r6	A	C	6: 56,980,179 (GRCm39)	Q258H	probably damaging	Het
Vmn2r84	A	G	10: 130,221,863 (GRCm39)	C786R	probably damaging	Het
Xylt2	T	C	11: 94,557,953 (GRCm39)	D638G	probably benign	Het
Zfp934	A	G	13: 62,665,652 (GRCm39)	C330R	probably damaging	Het

Other mutations in Rsrc2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00646:Rsrc2	APN	5	123,877,685 (GRCm39)	utr 5 prime	probably benign
IGL03268:Rsrc2	APN	5	123,878,790 (GRCm39)	nonsense	probably null
PIT4519001:Rsrc2	UTSW	5	123,883,135 (GRCm39)	missense	unknown
R0254:Rsrc2	UTSW	5	123,878,910 (GRCm39)	utr 5 prime	probably benign
R2889:Rsrc2	UTSW	5	123,874,620 (GRCm39)	critical splice donor site	probably benign
R3875:Rsrc2	UTSW	5	123,874,691 (GRCm39)	utr 5 prime	probably benign
R4914:Rsrc2	UTSW	5	123,877,613 (GRCm39)	utr 5 prime	probably benign
R5200:Rsrc2	UTSW	5	123,877,562 (GRCm39)	nonsense	probably null
R5473:Rsrc2	UTSW	5	123,869,150 (GRCm39)	missense	probably damaging	1.00
R6263:Rsrc2	UTSW	5	123,877,751 (GRCm39)	start gained	probably benign
R6657:Rsrc2	UTSW	5	123,877,630 (GRCm39)	utr 5 prime	probably benign
R6806:Rsrc2	UTSW	5	123,877,594 (GRCm39)	utr 5 prime	probably benign
R7145:Rsrc2	UTSW	5	123,877,630 (GRCm39)	utr 5 prime	probably benign
R8894:Rsrc2	UTSW	5	123,878,793 (GRCm39)	missense	unknown
R9648:Rsrc2	UTSW	5	123,877,688 (GRCm39)	missense	unknown
R9768:Rsrc2	UTSW	5	123,868,561 (GRCm39)	missense	probably benign	0.08
X0020:Rsrc2	UTSW	5	123,867,286 (GRCm39)	missense	probably damaging	0.97

Predicted Primers

PCR Primer
(F):5'- GTAAAGCACGCTCACTGAGAC -3'
(R):5'- CCCTGTCTTGATAGCATATTTTGGG -3'

Sequencing Primer
(F):5'- GCTCACTGAGACAACAACTAGG -3'
(R):5'- TCAAAAGGTCAAGGTCTGCCTG -3'

Posted On

2016-07-06