Incidental Mutation 'R5172:Acmsd'
| ID |
398776 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Acmsd
|
| Ensembl Gene |
ENSMUSG00000026348 |
| Gene Name |
amino carboxymuconate semialdehyde decarboxylase |
| Synonyms |
|
| MMRRC Submission |
042752-MU
|
| Accession Numbers |
|
| Essential gene? |
Non essential
(E-score: 0.000)
|
| Stock # |
R5172 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
1 |
| Chromosomal Location |
127657150-127695715 bp(+) (GRCm39) |
| Type of Mutation |
nonsense |
| DNA Base Change (assembly) |
C to T
at 127681585 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Arginine to Stop codon
at position 183
(R183*)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000048482
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000038006]
|
| AlphaFold |
Q8R519 |
| Predicted Effect |
probably null
Transcript: ENSMUST00000038006
AA Change: R183*
|
| SMART Domains |
Protein: ENSMUSP00000048482
Gene: ENSMUSG00000026348
AA Change: R183*
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Amidohydro_2
|
3 |
330 |
7.8e-78 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000185310
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000186537
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000188163
|
| Coding Region Coverage |
- 1x: 99.3%
- 3x: 98.7%
- 10x: 97.5%
- 20x: 95.9%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The neuronal excitotoxin quinolinate is an intermediate in the de novo synthesis pathway of NAD from tryptophan, and has been implicated in the pathogenesis of several neurodegenerative disorders. Quinolinate is derived from alpha-amino-beta-carboxy-muconate-epsilon-semialdehyde (ACMS). ACMSD (ACMS decarboxylase; EC 4.1.1.45) can divert ACMS to a benign catabolite and thus prevent the accumulation of quinolinate from ACMS.[supplied by OMIM, Oct 2004]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 42 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Abcc3 |
T |
C |
11: 94,266,434 (GRCm39) |
Y52C |
probably damaging |
Het |
| Anxa2 |
T |
A |
9: 69,392,533 (GRCm39) |
D127E |
probably damaging |
Het |
| Atrnl1 |
T |
A |
19: 57,673,945 (GRCm39) |
Y593* |
probably null |
Het |
| Atxn2 |
C |
T |
5: 121,933,098 (GRCm39) |
|
probably null |
Het |
| Ccl6 |
A |
T |
11: 83,480,169 (GRCm39) |
Y66N |
probably damaging |
Het |
| Ccng1 |
A |
G |
11: 40,642,113 (GRCm39) |
V223A |
probably benign |
Het |
| Cfap44 |
T |
C |
16: 44,269,556 (GRCm39) |
Y1187H |
probably benign |
Het |
| Cfc1 |
A |
T |
1: 34,575,011 (GRCm39) |
I10F |
probably benign |
Het |
| Chrne |
T |
A |
11: 70,506,352 (GRCm39) |
T365S |
probably benign |
Het |
| Clec4b1 |
G |
T |
6: 123,048,414 (GRCm39) |
R183L |
probably benign |
Het |
| Csmd2 |
A |
C |
4: 128,371,190 (GRCm39) |
Q1926P |
probably benign |
Het |
| Dmpk |
C |
G |
7: 18,821,944 (GRCm39) |
L301V |
probably benign |
Het |
| Dzip1 |
T |
A |
14: 119,124,563 (GRCm39) |
Q570L |
probably damaging |
Het |
| Fam149a |
T |
A |
8: 45,797,690 (GRCm39) |
Q507L |
probably damaging |
Het |
| Frem3 |
T |
C |
8: 81,339,195 (GRCm39) |
V496A |
probably benign |
Het |
| Fryl |
A |
T |
5: 73,259,016 (GRCm39) |
D589E |
possibly damaging |
Het |
| Hemk1 |
T |
C |
9: 107,206,631 (GRCm39) |
E4G |
possibly damaging |
Het |
| Igkv4-80 |
A |
C |
6: 68,993,649 (GRCm39) |
S81A |
probably benign |
Het |
| Kcnh7 |
T |
C |
2: 62,569,508 (GRCm39) |
D796G |
possibly damaging |
Het |
| Lemd2 |
G |
T |
17: 27,414,356 (GRCm39) |
S326* |
probably null |
Het |
| Mdc1 |
T |
C |
17: 36,163,982 (GRCm39) |
S1177P |
probably benign |
Het |
| Mfsd4b4 |
A |
G |
10: 39,770,083 (GRCm39) |
F78S |
probably damaging |
Het |
| Mmgt2 |
T |
A |
11: 62,555,954 (GRCm39) |
F101I |
possibly damaging |
Het |
| Myo18a |
T |
C |
11: 77,714,924 (GRCm39) |
L785P |
probably damaging |
Het |
| Nup155 |
C |
A |
15: 8,139,026 (GRCm39) |
Q33K |
probably benign |
Het |
| Or52r1c |
T |
C |
7: 102,734,884 (GRCm39) |
L48P |
probably damaging |
Het |
| Or5w19 |
A |
G |
2: 87,699,171 (GRCm39) |
T279A |
probably benign |
Het |
| Otx1 |
C |
A |
11: 21,947,037 (GRCm39) |
A91S |
probably damaging |
Het |
| Pank1 |
A |
T |
19: 34,818,202 (GRCm39) |
C112* |
probably null |
Het |
| Pcmtd1 |
T |
A |
1: 7,233,485 (GRCm39) |
M23K |
probably benign |
Het |
| Rere |
A |
T |
4: 150,654,726 (GRCm39) |
R419S |
unknown |
Het |
| Rpf1 |
T |
C |
3: 146,218,050 (GRCm39) |
R155G |
possibly damaging |
Het |
| Sema7a |
A |
G |
9: 57,864,961 (GRCm39) |
T421A |
probably benign |
Het |
| Sharpin |
A |
G |
15: 76,231,741 (GRCm39) |
S323P |
probably benign |
Het |
| Slamf6 |
A |
G |
1: 171,764,147 (GRCm39) |
E180G |
probably benign |
Het |
| Snd1 |
T |
G |
6: 28,886,615 (GRCm39) |
V874G |
possibly damaging |
Het |
| Sult6b2 |
A |
T |
6: 142,743,657 (GRCm39) |
V123D |
probably damaging |
Het |
| Tpk1 |
A |
T |
6: 43,536,951 (GRCm39) |
|
probably null |
Het |
| Vmn1r160 |
A |
T |
7: 22,570,761 (GRCm39) |
N38I |
probably damaging |
Het |
| Wdr93 |
T |
A |
7: 79,402,241 (GRCm39) |
I180N |
probably damaging |
Het |
| Ythdf3 |
C |
T |
3: 16,258,198 (GRCm39) |
T119I |
probably damaging |
Het |
| Zc3h18 |
T |
G |
8: 123,134,159 (GRCm39) |
|
probably benign |
Het |
|
| Other mutations in Acmsd |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01586:Acmsd
|
APN |
1 |
127,687,447 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02203:Acmsd
|
APN |
1 |
127,666,342 (GRCm39) |
splice site |
probably benign |
|
|
IGL02209:Acmsd
|
APN |
1 |
127,687,492 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02429:Acmsd
|
APN |
1 |
127,687,453 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02577:Acmsd
|
APN |
1 |
127,667,696 (GRCm39) |
missense |
probably benign |
0.05 |
|
IGL02724:Acmsd
|
APN |
1 |
127,676,822 (GRCm39) |
missense |
possibly damaging |
0.84 |
|
IGL03215:Acmsd
|
APN |
1 |
127,685,750 (GRCm39) |
nonsense |
probably null |
|
|
H8562:Acmsd
|
UTSW |
1 |
127,676,795 (GRCm39) |
missense |
probably benign |
|
|
R0535:Acmsd
|
UTSW |
1 |
127,693,680 (GRCm39) |
missense |
probably benign |
0.10 |
|
R0551:Acmsd
|
UTSW |
1 |
127,694,070 (GRCm39) |
missense |
probably benign |
0.05 |
|
R0593:Acmsd
|
UTSW |
1 |
127,666,340 (GRCm39) |
splice site |
probably benign |
|
|
R1282:Acmsd
|
UTSW |
1 |
127,666,297 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R1633:Acmsd
|
UTSW |
1 |
127,681,592 (GRCm39) |
missense |
probably benign |
0.33 |
|
R1800:Acmsd
|
UTSW |
1 |
127,687,493 (GRCm39) |
nonsense |
probably null |
|
|
R3018:Acmsd
|
UTSW |
1 |
127,676,853 (GRCm39) |
missense |
probably benign |
0.11 |
|
R4195:Acmsd
|
UTSW |
1 |
127,676,931 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4196:Acmsd
|
UTSW |
1 |
127,676,931 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4288:Acmsd
|
UTSW |
1 |
127,666,309 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4591:Acmsd
|
UTSW |
1 |
127,676,934 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R5637:Acmsd
|
UTSW |
1 |
127,694,050 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R6147:Acmsd
|
UTSW |
1 |
127,657,157 (GRCm39) |
start gained |
probably benign |
|
|
R7055:Acmsd
|
UTSW |
1 |
127,681,570 (GRCm39) |
missense |
probably benign |
0.10 |
|
R7261:Acmsd
|
UTSW |
1 |
127,687,561 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7398:Acmsd
|
UTSW |
1 |
127,657,172 (GRCm39) |
start gained |
probably benign |
|
|
R8030:Acmsd
|
UTSW |
1 |
127,676,898 (GRCm39) |
missense |
possibly damaging |
0.50 |
|
R9081:Acmsd
|
UTSW |
1 |
127,687,468 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
X0067:Acmsd
|
UTSW |
1 |
127,687,468 (GRCm39) |
missense |
probably benign |
0.42 |
|
Z1176:Acmsd
|
UTSW |
1 |
127,673,539 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Predicted Primers |
PCR Primer
(F):5'- GCAGGACTAAATTGGTCAAGGAATC -3'
(R):5'- TCCAGACACAAGATACTGTAAAGG -3'
Sequencing Primer
(F):5'- AGTCTCCCCCAGATAACTTC -3'
(R):5'- CTGCCTAGAAGAAGTTCAGATTAGCC -3'
|
| Posted On |
2016-07-06 |
Incidental Mutation