Incidental Mutation 'R5172:Kcnh7'
| ID |
398783 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Kcnh7
|
| Ensembl Gene |
ENSMUSG00000059742 |
| Gene Name |
potassium voltage-gated channel, subfamily H (eag-related), member 7 |
| Synonyms |
erg3, 9330137I11Rik, Kv11.3 |
| MMRRC Submission |
042752-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.100)
|
| Stock # |
R5172 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
2 |
| Chromosomal Location |
62524428-63014980 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to C
at 62569508 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Aspartic acid to Glycine
at position 796
(D796G)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000074563
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000075052]
|
| AlphaFold |
Q9ER47 |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000075052
AA Change: D796G
PolyPhen 2
Score 0.878 (Sensitivity: 0.82; Specificity: 0.94)
|
| SMART Domains |
Protein: ENSMUSP00000074563
Gene: ENSMUSG00000059742
AA Change: D796G
| Domain | Start | End | E-Value | Type |
|---|
|
PAS
|
20 |
87 |
8.97e0 |
SMART |
|
PAC
|
93 |
135 |
3.48e-1 |
SMART |
|
Pfam:Ion_trans
|
407 |
674 |
4.9e-39 |
PFAM |
|
Pfam:Ion_trans_2
|
588 |
668 |
3.2e-13 |
PFAM |
|
cNMP
|
745 |
863 |
1.5e-23 |
SMART |
|
low complexity region
|
921 |
940 |
N/A |
INTRINSIC |
|
coiled coil region
|
1022 |
1058 |
N/A |
INTRINSIC |
|
low complexity region
|
1114 |
1127 |
N/A |
INTRINSIC |
|
| Coding Region Coverage |
- 1x: 99.3%
- 3x: 98.7%
- 10x: 97.5%
- 20x: 95.9%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Voltage-gated potassium (Kv) channels represent the most complex class of voltage-gated ion channels from both functional and structural standpoints. Their diverse functions include regulating neurotransmitter release, heart rate, insulin secretion, neuronal excitability, epithelial electrolyte transport, smooth muscle contraction, and cell volume. This gene encodes a member of the potassium channel, voltage-gated, subfamily H. This member is a pore-forming (alpha) subunit. There are at least two alternatively spliced transcript variants derived from this gene and encoding distinct isoforms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 42 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Abcc3 |
T |
C |
11: 94,266,434 (GRCm39) |
Y52C |
probably damaging |
Het |
| Acmsd |
C |
T |
1: 127,681,585 (GRCm39) |
R183* |
probably null |
Het |
| Anxa2 |
T |
A |
9: 69,392,533 (GRCm39) |
D127E |
probably damaging |
Het |
| Atrnl1 |
T |
A |
19: 57,673,945 (GRCm39) |
Y593* |
probably null |
Het |
| Atxn2 |
C |
T |
5: 121,933,098 (GRCm39) |
|
probably null |
Het |
| Ccl6 |
A |
T |
11: 83,480,169 (GRCm39) |
Y66N |
probably damaging |
Het |
| Ccng1 |
A |
G |
11: 40,642,113 (GRCm39) |
V223A |
probably benign |
Het |
| Cfap44 |
T |
C |
16: 44,269,556 (GRCm39) |
Y1187H |
probably benign |
Het |
| Cfc1 |
A |
T |
1: 34,575,011 (GRCm39) |
I10F |
probably benign |
Het |
| Chrne |
T |
A |
11: 70,506,352 (GRCm39) |
T365S |
probably benign |
Het |
| Clec4b1 |
G |
T |
6: 123,048,414 (GRCm39) |
R183L |
probably benign |
Het |
| Csmd2 |
A |
C |
4: 128,371,190 (GRCm39) |
Q1926P |
probably benign |
Het |
| Dmpk |
C |
G |
7: 18,821,944 (GRCm39) |
L301V |
probably benign |
Het |
| Dzip1 |
T |
A |
14: 119,124,563 (GRCm39) |
Q570L |
probably damaging |
Het |
| Fam149a |
T |
A |
8: 45,797,690 (GRCm39) |
Q507L |
probably damaging |
Het |
| Frem3 |
T |
C |
8: 81,339,195 (GRCm39) |
V496A |
probably benign |
Het |
| Fryl |
A |
T |
5: 73,259,016 (GRCm39) |
D589E |
possibly damaging |
Het |
| Hemk1 |
T |
C |
9: 107,206,631 (GRCm39) |
E4G |
possibly damaging |
Het |
| Igkv4-80 |
A |
C |
6: 68,993,649 (GRCm39) |
S81A |
probably benign |
Het |
| Lemd2 |
G |
T |
17: 27,414,356 (GRCm39) |
S326* |
probably null |
Het |
| Mdc1 |
T |
C |
17: 36,163,982 (GRCm39) |
S1177P |
probably benign |
Het |
| Mfsd4b4 |
A |
G |
10: 39,770,083 (GRCm39) |
F78S |
probably damaging |
Het |
| Mmgt2 |
T |
A |
11: 62,555,954 (GRCm39) |
F101I |
possibly damaging |
Het |
| Myo18a |
T |
C |
11: 77,714,924 (GRCm39) |
L785P |
probably damaging |
Het |
| Nup155 |
C |
A |
15: 8,139,026 (GRCm39) |
Q33K |
probably benign |
Het |
| Or52r1c |
T |
C |
7: 102,734,884 (GRCm39) |
L48P |
probably damaging |
Het |
| Or5w19 |
A |
G |
2: 87,699,171 (GRCm39) |
T279A |
probably benign |
Het |
| Otx1 |
C |
A |
11: 21,947,037 (GRCm39) |
A91S |
probably damaging |
Het |
| Pank1 |
A |
T |
19: 34,818,202 (GRCm39) |
C112* |
probably null |
Het |
| Pcmtd1 |
T |
A |
1: 7,233,485 (GRCm39) |
M23K |
probably benign |
Het |
| Rere |
A |
T |
4: 150,654,726 (GRCm39) |
R419S |
unknown |
Het |
| Rpf1 |
T |
C |
3: 146,218,050 (GRCm39) |
R155G |
possibly damaging |
Het |
| Sema7a |
A |
G |
9: 57,864,961 (GRCm39) |
T421A |
probably benign |
Het |
| Sharpin |
A |
G |
15: 76,231,741 (GRCm39) |
S323P |
probably benign |
Het |
| Slamf6 |
A |
G |
1: 171,764,147 (GRCm39) |
E180G |
probably benign |
Het |
| Snd1 |
T |
G |
6: 28,886,615 (GRCm39) |
V874G |
possibly damaging |
Het |
| Sult6b2 |
A |
T |
6: 142,743,657 (GRCm39) |
V123D |
probably damaging |
Het |
| Tpk1 |
A |
T |
6: 43,536,951 (GRCm39) |
|
probably null |
Het |
| Vmn1r160 |
A |
T |
7: 22,570,761 (GRCm39) |
N38I |
probably damaging |
Het |
| Wdr93 |
T |
A |
7: 79,402,241 (GRCm39) |
I180N |
probably damaging |
Het |
| Ythdf3 |
C |
T |
3: 16,258,198 (GRCm39) |
T119I |
probably damaging |
Het |
| Zc3h18 |
T |
G |
8: 123,134,159 (GRCm39) |
|
probably benign |
Het |
|
| Other mutations in Kcnh7 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00513:Kcnh7
|
APN |
2 |
62,595,035 (GRCm39) |
missense |
probably benign |
0.01 |
|
IGL00693:Kcnh7
|
APN |
2 |
62,564,598 (GRCm39) |
missense |
probably benign |
0.06 |
|
IGL00776:Kcnh7
|
APN |
2 |
62,680,720 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL00956:Kcnh7
|
APN |
2 |
62,607,983 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01651:Kcnh7
|
APN |
2 |
62,564,628 (GRCm39) |
missense |
possibly damaging |
0.47 |
|
IGL01780:Kcnh7
|
APN |
2 |
62,667,507 (GRCm39) |
missense |
probably benign |
0.17 |
|
IGL01859:Kcnh7
|
APN |
2 |
62,552,132 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL02213:Kcnh7
|
APN |
2 |
62,569,706 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02302:Kcnh7
|
APN |
2 |
62,536,402 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02526:Kcnh7
|
APN |
2 |
62,680,781 (GRCm39) |
missense |
possibly damaging |
0.46 |
|
IGL02850:Kcnh7
|
APN |
2 |
62,618,029 (GRCm39) |
nonsense |
probably null |
|
|
IGL02989:Kcnh7
|
APN |
2 |
62,552,269 (GRCm39) |
missense |
probably benign |
|
|
IGL02990:Kcnh7
|
APN |
2 |
62,536,330 (GRCm39) |
missense |
probably benign |
0.11 |
|
G1citation:Kcnh7
|
UTSW |
2 |
62,618,248 (GRCm39) |
missense |
probably damaging |
1.00 |
|
LCD18:Kcnh7
|
UTSW |
2 |
62,880,143 (GRCm39) |
intron |
probably benign |
|
|
R0129:Kcnh7
|
UTSW |
2 |
62,546,503 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0622:Kcnh7
|
UTSW |
2 |
62,667,633 (GRCm39) |
splice site |
probably null |
|
|
R0638:Kcnh7
|
UTSW |
2 |
62,607,854 (GRCm39) |
missense |
probably benign |
0.13 |
|
R1006:Kcnh7
|
UTSW |
2 |
62,546,527 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1200:Kcnh7
|
UTSW |
2 |
62,607,739 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1330:Kcnh7
|
UTSW |
2 |
62,607,755 (GRCm39) |
missense |
possibly damaging |
0.56 |
|
R1614:Kcnh7
|
UTSW |
2 |
62,680,948 (GRCm39) |
missense |
probably benign |
0.03 |
|
R1782:Kcnh7
|
UTSW |
2 |
62,566,513 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1861:Kcnh7
|
UTSW |
2 |
62,607,736 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R1862:Kcnh7
|
UTSW |
2 |
62,618,098 (GRCm39) |
missense |
possibly damaging |
0.46 |
|
R2197:Kcnh7
|
UTSW |
2 |
62,607,950 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2510:Kcnh7
|
UTSW |
2 |
62,552,261 (GRCm39) |
missense |
probably benign |
|
|
R2988:Kcnh7
|
UTSW |
2 |
62,552,172 (GRCm39) |
missense |
probably benign |
0.20 |
|
R3024:Kcnh7
|
UTSW |
2 |
62,595,007 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3433:Kcnh7
|
UTSW |
2 |
62,552,261 (GRCm39) |
missense |
probably benign |
|
|
R4415:Kcnh7
|
UTSW |
2 |
62,536,417 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4540:Kcnh7
|
UTSW |
2 |
62,569,530 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4570:Kcnh7
|
UTSW |
2 |
62,667,439 (GRCm39) |
missense |
possibly damaging |
0.91 |
|
R4827:Kcnh7
|
UTSW |
2 |
62,546,564 (GRCm39) |
missense |
probably benign |
|
|
R4990:Kcnh7
|
UTSW |
2 |
62,564,632 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5822:Kcnh7
|
UTSW |
2 |
62,546,582 (GRCm39) |
missense |
probably benign |
|
|
R5996:Kcnh7
|
UTSW |
2 |
63,014,441 (GRCm39) |
start gained |
probably benign |
|
|
R6142:Kcnh7
|
UTSW |
2 |
62,569,704 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R6226:Kcnh7
|
UTSW |
2 |
62,607,903 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6244:Kcnh7
|
UTSW |
2 |
63,012,570 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6304:Kcnh7
|
UTSW |
2 |
62,594,960 (GRCm39) |
nonsense |
probably null |
|
|
R6400:Kcnh7
|
UTSW |
2 |
62,569,688 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6430:Kcnh7
|
UTSW |
2 |
62,680,876 (GRCm39) |
missense |
probably benign |
0.04 |
|
R6483:Kcnh7
|
UTSW |
2 |
62,676,118 (GRCm39) |
missense |
probably benign |
0.06 |
|
R6614:Kcnh7
|
UTSW |
2 |
62,607,940 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6753:Kcnh7
|
UTSW |
2 |
62,680,721 (GRCm39) |
missense |
probably benign |
|
|
R6822:Kcnh7
|
UTSW |
2 |
62,618,248 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6863:Kcnh7
|
UTSW |
2 |
62,618,029 (GRCm39) |
missense |
possibly damaging |
0.83 |
|
R7104:Kcnh7
|
UTSW |
2 |
62,618,031 (GRCm39) |
missense |
possibly damaging |
0.82 |
|
R7116:Kcnh7
|
UTSW |
2 |
62,707,614 (GRCm39) |
missense |
probably benign |
0.02 |
|
R7263:Kcnh7
|
UTSW |
2 |
62,566,314 (GRCm39) |
splice site |
probably null |
|
|
R7657:Kcnh7
|
UTSW |
2 |
62,566,379 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7855:Kcnh7
|
UTSW |
2 |
62,667,538 (GRCm39) |
nonsense |
probably null |
|
|
R7968:Kcnh7
|
UTSW |
2 |
62,566,444 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8183:Kcnh7
|
UTSW |
2 |
62,533,321 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R8343:Kcnh7
|
UTSW |
2 |
62,680,879 (GRCm39) |
missense |
probably benign |
0.01 |
|
R8405:Kcnh7
|
UTSW |
2 |
62,533,446 (GRCm39) |
missense |
probably benign |
0.04 |
|
R8411:Kcnh7
|
UTSW |
2 |
62,594,952 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8493:Kcnh7
|
UTSW |
2 |
62,681,003 (GRCm39) |
missense |
probably benign |
0.31 |
|
R8744:Kcnh7
|
UTSW |
2 |
63,012,433 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R8988:Kcnh7
|
UTSW |
2 |
62,552,209 (GRCm39) |
missense |
|
|
|
R9082:Kcnh7
|
UTSW |
2 |
62,607,878 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9206:Kcnh7
|
UTSW |
2 |
62,607,947 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9272:Kcnh7
|
UTSW |
2 |
62,618,097 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9382:Kcnh7
|
UTSW |
2 |
62,667,612 (GRCm39) |
missense |
probably benign |
0.01 |
|
R9674:Kcnh7
|
UTSW |
2 |
62,595,060 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9771:Kcnh7
|
UTSW |
2 |
62,569,719 (GRCm39) |
missense |
probably damaging |
1.00 |
|
X0011:Kcnh7
|
UTSW |
2 |
62,595,067 (GRCm39) |
missense |
probably damaging |
0.99 |
|
Z1088:Kcnh7
|
UTSW |
2 |
63,014,412 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1088:Kcnh7
|
UTSW |
2 |
62,566,447 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Predicted Primers |
PCR Primer
(F):5'- ACCATGAAGCTGAGATCATGC -3'
(R):5'- TACAAAACTGCAAAGCCTTTCG -3'
Sequencing Primer
(F):5'- GACCTCAAATGTCTAAATAGCTGTC -3'
(R):5'- CTGCAAAGCCTTTCGAGGAG -3'
|
| Posted On |
2016-07-06 |
Incidental Mutation