Incidental Mutation 'R5197:Ift74'
ID 400324
Institutional Source Beutler Lab
Gene Symbol Ift74
Ensembl Gene ENSMUSG00000028576
Gene Name intraflagellar transport 74
Synonyms Cmg1, Ccdc2, 1700029H06Rik, b2b796Clo
MMRRC Submission 042773-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R5197 (G1)
Quality Score 225
Status Validated
Chromosome 4
Chromosomal Location 94502728-94581466 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 94550833 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Aspartic acid to Glutamic Acid at position 328 (D328E)
Ref Sequence ENSEMBL: ENSMUSP00000102721 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000030311] [ENSMUST00000107104]
AlphaFold Q8BKE9
Predicted Effect probably benign
Transcript: ENSMUST00000030311
AA Change: D328E

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
SMART Domains Protein: ENSMUSP00000030311
Gene: ENSMUSG00000028576
AA Change: D328E

DomainStartEndE-ValueType
low complexity region 22 33 N/A INTRINSIC
low complexity region 47 62 N/A INTRINSIC
coiled coil region 98 271 N/A INTRINSIC
coiled coil region 302 382 N/A INTRINSIC
coiled coil region 430 490 N/A INTRINSIC
coiled coil region 512 546 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000104728
Predicted Effect probably benign
Transcript: ENSMUST00000107104
AA Change: D328E

PolyPhen 2 Score 0.002 (Sensitivity: 0.99; Specificity: 0.30)
SMART Domains Protein: ENSMUSP00000102721
Gene: ENSMUSG00000028576
AA Change: D328E

DomainStartEndE-ValueType
low complexity region 22 33 N/A INTRINSIC
low complexity region 47 62 N/A INTRINSIC
coiled coil region 98 271 N/A INTRINSIC
coiled coil region 302 352 N/A INTRINSIC
Meta Mutation Damage Score 0.0662 question?
Coding Region Coverage
  • 1x: 99.3%
  • 3x: 98.7%
  • 10x: 97.3%
  • 20x: 95.5%
Validation Efficiency 99% (67/68)
MGI Phenotype PHENOTYPE: Mice homozygous for an ENU-induced mutation exhibit complex congenital heart disease associated with heterotaxy. [provided by MGI curators]
Allele List at MGI

All alleles(23) : Targeted(2) Gene trapped(21)

Other mutations in this stock
Total: 64 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Acsbg1 T C 9: 54,529,866 (GRCm39) E247G possibly damaging Het
Adgra3 A G 5: 50,118,096 (GRCm39) F1151L probably benign Het
Afg3l2 G T 18: 67,554,329 (GRCm39) L458M probably damaging Het
Aldh4a1 A C 4: 139,375,612 (GRCm39) probably benign Het
Anln A T 9: 22,264,077 (GRCm39) probably null Het
Aste1 T C 9: 105,282,253 (GRCm39) S74P probably damaging Het
Atp6v0e2 G A 6: 48,517,051 (GRCm39) R77H probably benign Het
Brpf1 A G 6: 113,296,902 (GRCm39) D962G possibly damaging Het
Btbd2 T C 10: 80,482,253 (GRCm39) D249G probably damaging Het
Catsper3 T C 13: 55,955,989 (GRCm39) probably null Het
Cfap43 A G 19: 47,885,811 (GRCm39) L268P probably damaging Het
Cftr T C 6: 18,255,413 (GRCm39) V540A probably benign Het
Col22a1 C T 15: 71,881,255 (GRCm39) G32D probably damaging Het
Col5a2 G T 1: 45,432,241 (GRCm39) P804Q probably benign Het
Cyp2d41-ps A G 15: 82,662,981 (GRCm39) noncoding transcript Het
Cyp39a1 T G 17: 44,057,429 (GRCm39) L423V possibly damaging Het
Elmo1 T G 13: 20,748,607 (GRCm39) V484G probably benign Het
Eps8 C A 6: 137,467,288 (GRCm39) Q656H probably damaging Het
Eps8 T C 6: 137,467,289 (GRCm39) Q656R possibly damaging Het
Fshb T C 2: 106,887,854 (GRCm39) D55G possibly damaging Het
Garin1a G T 6: 29,281,221 (GRCm39) probably benign Het
H3c4 T A 13: 23,760,304 (GRCm39) L110Q probably damaging Het
Herc1 C A 9: 66,355,786 (GRCm39) Q2346K probably damaging Het
Htr3b T C 9: 48,856,815 (GRCm39) D221G probably benign Het
Kif21b A T 1: 136,072,363 (GRCm39) K23M probably damaging Het
Lgr6 C T 1: 134,921,748 (GRCm39) A199T probably damaging Het
Lipc T A 9: 70,705,673 (GRCm39) E470V probably benign Het
Lrrc4 G T 6: 28,830,142 (GRCm39) T68K probably damaging Het
Lrrc63 T A 14: 75,322,322 (GRCm39) H594L possibly damaging Het
Mfsd14a A T 3: 116,442,150 (GRCm39) probably benign Het
Mob2 T C 7: 141,563,274 (GRCm39) probably null Het
Nckap5 T A 1: 126,150,410 (GRCm39) H105L possibly damaging Het
Ngef C A 1: 87,437,090 (GRCm39) G133* probably null Het
Or14j2 T G 17: 37,886,111 (GRCm39) I68L probably benign Het
Or1e16 AGCGGTCGTAGGC AGC 11: 73,286,480 (GRCm39) probably null Het
Or2t1 T A 14: 14,328,462 (GRCm38) M117K probably damaging Het
Or52s1 G A 7: 102,861,207 (GRCm39) V47I probably benign Het
Or5b120 G T 19: 13,479,748 (GRCm39) V14F possibly damaging Het
Or5g23 T C 2: 85,438,791 (GRCm39) I154M probably benign Het
Pard3 A G 8: 127,800,040 (GRCm39) probably null Het
Pgm2 C T 5: 64,263,175 (GRCm39) A274V possibly damaging Het
Ppp1r9a T A 6: 5,156,177 (GRCm39) S1144R probably damaging Het
Pramel23 A C 4: 143,424,632 (GRCm39) C270W possibly damaging Het
Prkcq C T 2: 11,304,227 (GRCm39) P590L probably damaging Het
Psmd13 T A 7: 140,474,374 (GRCm39) probably null Het
Rab3gap1 T A 1: 127,816,931 (GRCm39) D63E probably benign Het
Rag2 C A 2: 101,461,085 (GRCm39) T465K probably damaging Het
Rnase6 A G 14: 51,367,670 (GRCm39) M21V unknown Het
Rufy4 T C 1: 74,186,822 (GRCm39) C537R probably damaging Het
Ryr2 A T 13: 11,653,316 (GRCm39) probably null Het
Sash1 T G 10: 8,615,989 (GRCm39) R624S probably damaging Het
Slc1a2 A G 2: 102,586,460 (GRCm39) I355V probably benign Het
Srrm2 T C 17: 24,036,358 (GRCm39) S1097P probably benign Het
Sugct C T 13: 17,497,861 (GRCm39) A271T probably damaging Het
Tdrd7 T C 4: 46,034,350 (GRCm39) V1065A probably damaging Het
Tmprss6 T A 15: 78,338,389 (GRCm39) Y307F probably damaging Het
Tram1 T C 1: 13,642,126 (GRCm39) N216S probably benign Het
Ttk T C 9: 83,721,394 (GRCm39) V93A probably benign Het
Ubr4 A G 4: 139,195,408 (GRCm39) Y1210C probably damaging Het
Wdr7 A G 18: 63,871,937 (GRCm39) K364E probably benign Het
Xrcc2 G T 5: 25,897,656 (GRCm39) H98N probably benign Het
Zdhhc11 A G 13: 74,113,688 (GRCm39) I77V probably benign Het
Zfp54 C T 17: 21,654,442 (GRCm39) S312L probably benign Het
Zfp647 G A 15: 76,796,285 (GRCm39) P125L probably damaging Het
Other mutations in Ift74
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00944:Ift74 APN 4 94,581,259 (GRCm39) missense probably damaging 1.00
IGL01534:Ift74 APN 4 94,568,181 (GRCm39) missense probably benign 0.00
IGL01701:Ift74 APN 4 94,550,895 (GRCm39) missense possibly damaging 0.94
IGL02155:Ift74 APN 4 94,567,488 (GRCm39) missense probably benign
IGL02455:Ift74 APN 4 94,524,068 (GRCm39) nonsense probably null
IGL02877:Ift74 APN 4 94,513,018 (GRCm39) critical splice donor site probably null
IGL03389:Ift74 APN 4 94,510,149 (GRCm39) missense possibly damaging 0.57
P0005:Ift74 UTSW 4 94,550,813 (GRCm39) splice site probably benign
PIT4243001:Ift74 UTSW 4 94,575,141 (GRCm39) missense possibly damaging 0.94
R0211:Ift74 UTSW 4 94,567,492 (GRCm39) missense probably benign 0.05
R0211:Ift74 UTSW 4 94,567,492 (GRCm39) missense probably benign 0.05
R1019:Ift74 UTSW 4 94,524,072 (GRCm39) missense probably benign 0.20
R1240:Ift74 UTSW 4 94,581,174 (GRCm39) splice site probably null
R1699:Ift74 UTSW 4 94,573,940 (GRCm39) missense probably benign 0.09
R1937:Ift74 UTSW 4 94,550,883 (GRCm39) missense probably benign 0.10
R2114:Ift74 UTSW 4 94,515,496 (GRCm39) missense probably benign 0.00
R2116:Ift74 UTSW 4 94,515,496 (GRCm39) missense probably benign 0.00
R2117:Ift74 UTSW 4 94,515,496 (GRCm39) missense probably benign 0.00
R2181:Ift74 UTSW 4 94,520,951 (GRCm39) missense probably damaging 0.98
R2680:Ift74 UTSW 4 94,541,265 (GRCm39) missense probably damaging 1.00
R3434:Ift74 UTSW 4 94,510,089 (GRCm39) critical splice acceptor site probably null
R3435:Ift74 UTSW 4 94,510,089 (GRCm39) critical splice acceptor site probably null
R4080:Ift74 UTSW 4 94,541,149 (GRCm39) splice site probably null
R4379:Ift74 UTSW 4 94,568,171 (GRCm39) missense probably benign 0.00
R4777:Ift74 UTSW 4 94,541,234 (GRCm39) missense probably benign 0.00
R5934:Ift74 UTSW 4 94,520,971 (GRCm39) missense probably benign
R5994:Ift74 UTSW 4 94,579,961 (GRCm39) missense possibly damaging 0.86
R6639:Ift74 UTSW 4 94,552,496 (GRCm39) intron probably benign
R6781:Ift74 UTSW 4 94,515,539 (GRCm39) missense probably damaging 1.00
R7156:Ift74 UTSW 4 94,549,189 (GRCm39) missense possibly damaging 0.95
R7239:Ift74 UTSW 4 94,541,187 (GRCm39) missense probably benign 0.00
R7899:Ift74 UTSW 4 94,510,214 (GRCm39) missense possibly damaging 0.90
R8814:Ift74 UTSW 4 94,550,873 (GRCm39) nonsense probably null
R8944:Ift74 UTSW 4 94,510,128 (GRCm39) missense probably damaging 1.00
R9029:Ift74 UTSW 4 94,506,271 (GRCm39) missense probably benign 0.11
R9112:Ift74 UTSW 4 94,575,103 (GRCm39) missense probably benign 0.00
R9615:Ift74 UTSW 4 94,550,822 (GRCm39) critical splice acceptor site probably null
Predicted Primers PCR Primer
(F):5'- TTGCTCACCAGACACAAAATTG -3'
(R):5'- CAGTTAAGTTGGGCGTATCATAG -3'

Sequencing Primer
(F):5'- TCATCCAAAGGCTGCTAGTG -3'
(R):5'- GCATCTGTTCAGATGCGT -3'
Posted On 2016-07-06