Incidental Mutation 'R5241:Map3k8'
| ID |
400869 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Map3k8
|
| Ensembl Gene |
ENSMUSG00000024235 |
| Gene Name |
mitogen-activated protein kinase kinase kinase 8 |
| Synonyms |
Tpl2, Cot, Cot/Tpl2, Tpl-2, c-COT |
| MMRRC Submission |
042812-MU
|
| Accession Numbers |
|
| Essential gene? |
Non essential
(E-score: 0.000)
|
| Stock # |
R5241 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
18 |
| Chromosomal Location |
4331325-4352978 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to C
at 4340750 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Glutamic Acid to Glycine
at position 188
(E188G)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000025078
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000025078]
[ENSMUST00000173930]
|
| AlphaFold |
Q07174 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000025078
AA Change: E188G
PolyPhen 2
Score 0.978 (Sensitivity: 0.76; Specificity: 0.96)
|
| SMART Domains |
Protein: ENSMUSP00000025078
Gene: ENSMUSG00000024235
AA Change: E188G
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:Pkinase
|
137 |
388 |
1.1e-47 |
PFAM |
|
Pfam:Pkinase_Tyr
|
139 |
386 |
4.6e-26 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000105472
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000173930
|
| SMART Domains |
Protein: ENSMUSP00000133469
Gene: ENSMUSG00000024235
| Domain | Start | End | E-Value | Type |
|---|
|
SCOP:d1phk__
|
146 |
169 |
2e-4 |
SMART |
|
| Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.3%
- 10x: 96.2%
- 20x: 91.8%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene is an oncogene that encodes a member of the serine/threonine protein kinase family. The encoded protein localizes to the cytoplasm and can activate both the MAP kinase and JNK kinase pathways. This protein was shown to activate IkappaB kinases, and thus induce the nuclear production of NF-kappaB. This protein was also found to promote the production of TNF-alpha and IL-2 during T lymphocyte activation. This gene may also utilize a downstream in-frame translation start codon, and thus produce an isoform containing a shorter N-terminus. The shorter isoform has been shown to display weaker transforming activity. Alternate splicing results in multiple transcript variants that encode the same protein. [provided by RefSeq, Sep 2011]
PHENOTYPE: Mutant mice resist endotoxic shock. Their MHC II expression is enhanced. Macrophages' TNF-alpha response to viruses and to all TLR ligands is impaired. Macrophage and T-cell secretion of other cytokines in response to various TLR ligands or OVA is aberrant. Anti-OVA Ig classes are abnormally skewed. [provided by MGI curators]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 39 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| A930033H14Rik |
A |
G |
10: 69,048,581 (GRCm39) |
|
probably null |
Het |
| Adgrb3 |
T |
C |
1: 25,150,871 (GRCm39) |
T881A |
possibly damaging |
Het |
| Adgrv1 |
A |
T |
13: 81,637,048 (GRCm39) |
C3464* |
probably null |
Het |
| Afp |
A |
G |
5: 90,649,473 (GRCm39) |
M347V |
probably benign |
Het |
| Apc2 |
A |
G |
10: 80,148,068 (GRCm39) |
T1041A |
probably benign |
Het |
| Atl1 |
T |
C |
12: 70,005,887 (GRCm39) |
S398P |
possibly damaging |
Het |
| Atp8b4 |
G |
A |
2: 126,225,646 (GRCm39) |
P528L |
probably benign |
Het |
| Bahcc1 |
C |
A |
11: 120,162,229 (GRCm39) |
P176T |
probably damaging |
Het |
| Bsnd |
A |
G |
4: 106,345,182 (GRCm39) |
V88A |
probably benign |
Het |
| Dnah7c |
T |
A |
1: 46,569,660 (GRCm39) |
F687Y |
probably benign |
Het |
| Dok6 |
T |
C |
18: 89,616,913 (GRCm39) |
I23M |
possibly damaging |
Het |
| Fcgbp |
A |
T |
7: 27,784,624 (GRCm39) |
D228V |
probably damaging |
Het |
| Gatad2a |
G |
A |
8: 70,370,667 (GRCm39) |
Q107* |
probably null |
Het |
| Glis3 |
G |
T |
19: 28,327,423 (GRCm39) |
T663K |
probably benign |
Het |
| Gm10784 |
T |
A |
13: 50,099,129 (GRCm39) |
|
noncoding transcript |
Het |
| Gsdmc2 |
C |
T |
15: 63,696,743 (GRCm39) |
R476H |
probably benign |
Het |
| Gsdmc3 |
A |
G |
15: 63,735,995 (GRCm39) |
S202P |
possibly damaging |
Het |
| Mccc1 |
T |
A |
3: 36,028,345 (GRCm39) |
Q487L |
probably benign |
Het |
| Msantd1 |
A |
G |
5: 35,078,813 (GRCm39) |
D116G |
probably damaging |
Het |
| Myh1 |
T |
A |
11: 67,095,275 (GRCm39) |
S212T |
probably benign |
Het |
| Nr1h4 |
A |
G |
10: 89,319,351 (GRCm39) |
Y158H |
probably damaging |
Het |
| Or4p19 |
T |
C |
2: 88,242,442 (GRCm39) |
T187A |
possibly damaging |
Het |
| Or51f1e |
T |
C |
7: 102,747,524 (GRCm39) |
V192A |
probably benign |
Het |
| Or6k8-ps1 |
T |
A |
1: 173,979,667 (GRCm39) |
I195N |
probably benign |
Het |
| Pcnt |
A |
T |
10: 76,269,451 (GRCm39) |
H272Q |
probably benign |
Het |
| Pdia5 |
T |
C |
16: 35,250,145 (GRCm39) |
N242S |
probably benign |
Het |
| Pkd1l2 |
A |
T |
8: 117,761,857 (GRCm39) |
D1441E |
probably damaging |
Het |
| Runx2 |
G |
T |
17: 44,950,664 (GRCm39) |
Y203* |
probably null |
Het |
| Sdr9c7 |
T |
G |
10: 127,745,659 (GRCm39) |
I257S |
probably benign |
Het |
| Slitrk1 |
A |
G |
14: 109,150,444 (GRCm39) |
M89T |
probably benign |
Het |
| St14 |
G |
T |
9: 31,011,714 (GRCm39) |
C397* |
probably null |
Het |
| Tas2r123 |
T |
C |
6: 132,824,181 (GRCm39) |
I26T |
probably benign |
Het |
| Tmem144 |
A |
T |
3: 79,721,431 (GRCm39) |
M329K |
probably benign |
Het |
| Tmem252 |
T |
C |
19: 24,651,491 (GRCm39) |
M20T |
probably benign |
Het |
| Umodl1 |
T |
C |
17: 31,203,066 (GRCm39) |
V473A |
probably benign |
Het |
| Wdr70 |
A |
G |
15: 8,108,700 (GRCm39) |
C149R |
probably benign |
Het |
| Xirp2 |
C |
T |
2: 67,312,704 (GRCm39) |
R58* |
probably null |
Het |
| Zer1 |
A |
C |
2: 29,994,982 (GRCm39) |
L471R |
probably damaging |
Het |
| Zfp101 |
C |
T |
17: 33,601,210 (GRCm39) |
C182Y |
probably benign |
Het |
|
| Other mutations in Map3k8 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02458:Map3k8
|
APN |
18 |
4,334,660 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02483:Map3k8
|
APN |
18 |
4,349,318 (GRCm39) |
utr 5 prime |
probably benign |
|
|
IGL03174:Map3k8
|
APN |
18 |
4,349,247 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Flojo
|
UTSW |
18 |
4,339,548 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
gnostic_gospel
|
UTSW |
18 |
4,333,965 (GRCm39) |
missense |
probably damaging |
1.00 |
|
juicy
|
UTSW |
18 |
4,339,552 (GRCm39) |
missense |
probably damaging |
0.99 |
|
Sluggish
|
UTSW |
18 |
4,339,608 (GRCm39) |
splice site |
probably benign |
|
|
R0304:Map3k8
|
UTSW |
18 |
4,339,552 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R0569:Map3k8
|
UTSW |
18 |
4,349,162 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1748:Map3k8
|
UTSW |
18 |
4,334,766 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1793:Map3k8
|
UTSW |
18 |
4,332,389 (GRCm39) |
nonsense |
probably null |
|
|
R2310:Map3k8
|
UTSW |
18 |
4,349,001 (GRCm39) |
missense |
probably benign |
|
|
R3625:Map3k8
|
UTSW |
18 |
4,333,965 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4786:Map3k8
|
UTSW |
18 |
4,340,647 (GRCm39) |
nonsense |
probably null |
|
|
R4921:Map3k8
|
UTSW |
18 |
4,349,124 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
R4930:Map3k8
|
UTSW |
18 |
4,349,215 (GRCm39) |
nonsense |
probably null |
|
|
R4934:Map3k8
|
UTSW |
18 |
4,339,548 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R4956:Map3k8
|
UTSW |
18 |
4,339,530 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5549:Map3k8
|
UTSW |
18 |
4,340,762 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R6317:Map3k8
|
UTSW |
18 |
4,348,979 (GRCm39) |
critical splice donor site |
probably null |
|
|
R6326:Map3k8
|
UTSW |
18 |
4,340,651 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6910:Map3k8
|
UTSW |
18 |
4,340,801 (GRCm39) |
missense |
probably benign |
0.03 |
|
R7010:Map3k8
|
UTSW |
18 |
4,334,060 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7247:Map3k8
|
UTSW |
18 |
4,334,036 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7300:Map3k8
|
UTSW |
18 |
4,349,076 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R7348:Map3k8
|
UTSW |
18 |
4,340,561 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7903:Map3k8
|
UTSW |
18 |
4,349,162 (GRCm39) |
missense |
probably benign |
0.00 |
|
R8302:Map3k8
|
UTSW |
18 |
4,334,064 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R8676:Map3k8
|
UTSW |
18 |
4,343,137 (GRCm39) |
missense |
probably benign |
0.01 |
|
R8847:Map3k8
|
UTSW |
18 |
4,333,889 (GRCm39) |
missense |
|
|
|
R9068:Map3k8
|
UTSW |
18 |
4,340,557 (GRCm39) |
missense |
probably benign |
0.36 |
|
R9352:Map3k8
|
UTSW |
18 |
4,349,170 (GRCm39) |
missense |
probably benign |
|
|
R9460:Map3k8
|
UTSW |
18 |
4,349,277 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9526:Map3k8
|
UTSW |
18 |
4,333,869 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9548:Map3k8
|
UTSW |
18 |
4,349,141 (GRCm39) |
missense |
probably benign |
|
|
R9632:Map3k8
|
UTSW |
18 |
4,339,546 (GRCm39) |
missense |
probably damaging |
0.98 |
|
| Predicted Primers |
PCR Primer
(F):5'- GGATCACTTTCTTGGAGTGCAG -3'
(R):5'- GGTAAACATTTCTTGACACCACGG -3'
Sequencing Primer
(F):5'- GTGCAGAAAATCAAGTCCCTTG -3'
(R):5'- CGGTGCTCTGTTATACACATCAAGG -3'
|
| Posted On |
2016-07-06 |
Incidental Mutation