Incidental Mutation 'R5105:Or1q1'
| ID |
401967 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or1q1
|
| Ensembl Gene |
ENSMUSG00000055838 |
| Gene Name |
olfactory receptor family 1 subfamily Q member 1 |
| Synonyms |
GA_x6K02T2NLDC-33688556-33689482, MOR138-3, Olfr357 |
| MMRRC Submission |
042693-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.097)
|
| Stock # |
R5105 (G1)
|
| Quality Score |
225 |
|
Status
|
Validated
|
| Chromosome |
2 |
| Chromosomal Location |
36886824-36887750 bp(+) (GRCm39) |
| Type of Mutation |
splice site (4706 bp from exon) |
| DNA Base Change (assembly) |
G to A
at 36887469 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000150781
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000069578]
[ENSMUST00000213218]
[ENSMUST00000216437]
|
| AlphaFold |
Q8VFP4 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000069578
AA Change: A216T
PolyPhen 2
Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)
|
| SMART Domains |
Protein: ENSMUSP00000066272
Gene: ENSMUSG00000055838
AA Change: A216T
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
307 |
3.6e-53 |
PFAM |
|
Pfam:7tm_1
|
41 |
290 |
1.2e-20 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000213218
AA Change: A216T
PolyPhen 2
Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000216437
|
| Meta Mutation Damage Score |
0.2852 |
| Coding Region Coverage |
- 1x: 99.3%
- 3x: 98.7%
- 10x: 97.5%
- 20x: 95.8%
|
| Validation Efficiency |
96% (52/54) |
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 47 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Btbd8 |
T |
G |
5: 107,658,337 (GRCm39) |
S1124A |
possibly damaging |
Het |
| Camsap1 |
A |
G |
2: 25,830,941 (GRCm39) |
S445P |
probably damaging |
Het |
| Ccdc92 |
G |
A |
5: 124,912,858 (GRCm39) |
P224S |
probably damaging |
Het |
| Cep135 |
T |
C |
5: 76,741,939 (GRCm39) |
V125A |
probably benign |
Het |
| Cep192 |
T |
A |
18: 67,999,612 (GRCm39) |
C2159S |
probably benign |
Het |
| Col1a1 |
G |
T |
11: 94,833,211 (GRCm39) |
R404L |
unknown |
Het |
| Col6a3 |
A |
T |
1: 90,725,862 (GRCm39) |
M1382K |
possibly damaging |
Het |
| Cyp4a12b |
T |
C |
4: 115,290,958 (GRCm39) |
S329P |
probably damaging |
Het |
| Dclk1 |
T |
G |
3: 55,163,360 (GRCm39) |
S151A |
probably benign |
Het |
| Ddhd1 |
A |
T |
14: 45,894,864 (GRCm39) |
V202E |
probably benign |
Het |
| Dlx6 |
AGG |
AG |
6: 6,865,180 (GRCm39) |
|
probably null |
Het |
| Dnah10 |
A |
G |
5: 124,888,546 (GRCm39) |
E3050G |
probably benign |
Het |
| Dync1h1 |
T |
A |
12: 110,584,366 (GRCm39) |
F590I |
probably damaging |
Het |
| Eif4b |
T |
C |
15: 101,992,631 (GRCm39) |
Y63H |
probably benign |
Het |
| Fscb |
T |
C |
12: 64,520,110 (GRCm39) |
E452G |
possibly damaging |
Het |
| Gpx3 |
A |
T |
11: 54,797,980 (GRCm39) |
T39S |
possibly damaging |
Het |
| Grin2b |
T |
A |
6: 135,709,439 (GRCm39) |
Y1369F |
probably benign |
Het |
| Kank4 |
A |
T |
4: 98,667,396 (GRCm39) |
N350K |
probably benign |
Het |
| Kdm5d |
A |
G |
Y: 941,752 (GRCm39) |
K1318E |
probably benign |
Het |
| Large1 |
A |
T |
8: 73,578,872 (GRCm39) |
Y444* |
probably null |
Het |
| Lhx3 |
TCCTACGGGCCGGCCC |
TCC |
2: 26,091,435 (GRCm39) |
|
probably null |
Het |
| Lrrc47 |
A |
G |
4: 154,096,673 (GRCm39) |
Q156R |
probably damaging |
Het |
| Lrriq4 |
T |
C |
3: 30,704,632 (GRCm39) |
L220P |
probably damaging |
Het |
| Matn2 |
A |
G |
15: 34,355,814 (GRCm39) |
D273G |
possibly damaging |
Het |
| Myo18b |
T |
A |
5: 112,988,644 (GRCm39) |
I981F |
probably damaging |
Het |
| Or2n1c |
A |
C |
17: 38,519,208 (GRCm39) |
E24A |
possibly damaging |
Het |
| Or5aq1 |
A |
G |
2: 86,966,554 (GRCm39) |
I37T |
probably benign |
Het |
| Or6b13 |
A |
G |
7: 139,782,462 (GRCm39) |
Y74H |
probably damaging |
Het |
| Or8d6 |
T |
C |
9: 39,853,694 (GRCm39) |
V46A |
probably benign |
Het |
| Pkdrej |
T |
C |
15: 85,700,585 (GRCm39) |
T1784A |
probably damaging |
Het |
| Ppp3cb |
A |
G |
14: 20,559,490 (GRCm39) |
V422A |
possibly damaging |
Het |
| Rlf |
G |
A |
4: 121,007,564 (GRCm39) |
T472I |
probably damaging |
Het |
| Scaf11 |
T |
C |
15: 96,318,313 (GRCm39) |
E417G |
probably damaging |
Het |
| Shisa2 |
A |
T |
14: 59,867,263 (GRCm39) |
T172S |
possibly damaging |
Het |
| Siglec1 |
T |
A |
2: 130,922,320 (GRCm39) |
Q585L |
possibly damaging |
Het |
| Sorcs1 |
A |
T |
19: 50,213,579 (GRCm39) |
M716K |
possibly damaging |
Het |
| Sparcl1 |
C |
T |
5: 104,233,629 (GRCm39) |
M573I |
probably damaging |
Het |
| Stxbp5l |
C |
A |
16: 36,962,734 (GRCm39) |
V774F |
probably benign |
Het |
| Tcaf3 |
A |
G |
6: 42,568,259 (GRCm39) |
F699S |
probably damaging |
Het |
| Tmem87b |
T |
C |
2: 128,673,509 (GRCm39) |
V251A |
probably damaging |
Het |
| Trpc6 |
T |
A |
9: 8,649,471 (GRCm39) |
N560K |
probably benign |
Het |
| Trpv4 |
T |
A |
5: 114,764,981 (GRCm39) |
I678F |
probably damaging |
Het |
| Ttc3 |
A |
T |
16: 94,267,793 (GRCm39) |
H1935L |
possibly damaging |
Het |
| Vmn2r59 |
T |
A |
7: 41,696,529 (GRCm39) |
Y71F |
probably benign |
Het |
| Wdfy3 |
A |
G |
5: 102,003,415 (GRCm39) |
I2900T |
probably damaging |
Het |
| Zfp184 |
A |
G |
13: 22,143,799 (GRCm39) |
T502A |
possibly damaging |
Het |
| Zmym6 |
A |
G |
4: 127,017,551 (GRCm39) |
I1019V |
probably benign |
Het |
|
| Other mutations in Or1q1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01561:Or1q1
|
APN |
2 |
36,886,955 (GRCm39) |
missense |
probably benign |
|
|
IGL02043:Or1q1
|
APN |
2 |
36,887,477 (GRCm39) |
nonsense |
probably null |
|
|
IGL02277:Or1q1
|
APN |
2 |
36,887,196 (GRCm39) |
splice site |
probably null |
|
|
IGL03037:Or1q1
|
APN |
2 |
36,887,560 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL03378:Or1q1
|
APN |
2 |
36,886,915 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0212:Or1q1
|
UTSW |
2 |
36,887,644 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
R0212:Or1q1
|
UTSW |
2 |
36,887,335 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R1334:Or1q1
|
UTSW |
2 |
36,886,872 (GRCm39) |
missense |
probably benign |
0.27 |
|
R1704:Or1q1
|
UTSW |
2 |
36,886,896 (GRCm39) |
missense |
probably benign |
0.34 |
|
R2020:Or1q1
|
UTSW |
2 |
36,887,664 (GRCm39) |
missense |
possibly damaging |
0.85 |
|
R2364:Or1q1
|
UTSW |
2 |
36,887,577 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4700:Or1q1
|
UTSW |
2 |
36,887,515 (GRCm39) |
missense |
probably benign |
0.01 |
|
R5234:Or1q1
|
UTSW |
2 |
36,887,107 (GRCm39) |
missense |
probably benign |
|
|
R5557:Or1q1
|
UTSW |
2 |
36,887,358 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5966:Or1q1
|
UTSW |
2 |
36,886,957 (GRCm39) |
missense |
possibly damaging |
0.96 |
|
R6480:Or1q1
|
UTSW |
2 |
36,887,007 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7046:Or1q1
|
UTSW |
2 |
36,887,173 (GRCm39) |
missense |
probably benign |
0.39 |
|
R7350:Or1q1
|
UTSW |
2 |
36,886,873 (GRCm39) |
missense |
possibly damaging |
0.84 |
|
R7583:Or1q1
|
UTSW |
2 |
36,887,092 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8128:Or1q1
|
UTSW |
2 |
36,887,673 (GRCm39) |
missense |
probably benign |
0.13 |
|
R8196:Or1q1
|
UTSW |
2 |
36,886,873 (GRCm39) |
missense |
possibly damaging |
0.84 |
|
R8475:Or1q1
|
UTSW |
2 |
36,887,066 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R8867:Or1q1
|
UTSW |
2 |
36,887,691 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9550:Or1q1
|
UTSW |
2 |
36,887,137 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9627:Or1q1
|
UTSW |
2 |
36,887,665 (GRCm39) |
missense |
|
|
|
R9716:Or1q1
|
UTSW |
2 |
36,887,290 (GRCm39) |
missense |
probably damaging |
0.98 |
|
Z1088:Or1q1
|
UTSW |
2 |
36,887,717 (GRCm39) |
missense |
possibly damaging |
0.96 |
|
| Predicted Primers |
PCR Primer
(F):5'- GGTGGCTCTATGTCATGTCCTC -3'
(R):5'- TACATGACTGTCACAATGCGGC -3'
Sequencing Primer
(F):5'- ATGCCCTGCTGCACACC -3'
(R):5'- GGCCCTTGACCACTGAGTAACTAG -3'
|
| Posted On |
2016-07-22 |
Incidental Mutation