Mutagenetix > Incidental Mutation

Incidental Mutation 'R5283:Olfml2b'

402848

Institutional Source

Beutler Lab

Gene Symbol

Olfml2b

Ensembl Gene

ENSMUSG00000038463

Gene Name

olfactomedin-like 2B

Synonyms

4832415H08Rik, 1110018N05Rik, photomedin-2

MMRRC Submission

042868-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R5283 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

170472101-170510356 bp(+) (GRCm39)

Type of Mutation

nonsense

DNA Base Change (assembly)

C to T at 170508758 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Arginine to Stop codon at position 539 (R539*)

Ref Sequence

ENSEMBL: ENSMUSP00000047291 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000046792]

AlphaFold

Q3V1G4

Predicted Effect

probably null
Transcript: ENSMUST00000046792
AA Change: R539*

SMART Domains

Protein: ENSMUSP00000047291
Gene: ENSMUSG00000038463
AA Change: R539*

Domain	Start	End	E-Value	Type
signal peptide	1	20	N/A	INTRINSIC
coiled coil region	41	68	N/A	INTRINSIC
coiled coil region	179	213	N/A	INTRINSIC
low complexity region	233	238	N/A	INTRINSIC
Blast:OLF	254	306	1e-6	BLAST
low complexity region	308	319	N/A	INTRINSIC
low complexity region	343	382	N/A	INTRINSIC
OLF	492	746	4.76e-61	SMART

Coding Region Coverage

1x: 99.4%
3x: 98.9%
10x: 97.9%
20x: 96.7%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes an olfactomedin domain-containing protein. Most olfactomedin domain-containing proteins are secreted glycoproteins. [provided by RefSeq, Dec 2016]

Allele List at MGI

Other mutations in this stock

Total: 57 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Aamp	C	T	1: 74,323,165 (GRCm39)	E53K	possibly damaging	Het
Amotl1	T	C	9: 14,469,780 (GRCm39)	E651G	probably damaging	Het
Ankrd11	A	C	8: 123,610,921 (GRCm39)	V2655G	probably damaging	Het
Apbb1ip	G	A	2: 22,757,683 (GRCm39)	V434M	probably benign	Het
Atp5pd	T	C	11: 115,306,611 (GRCm39)	Y150C	probably damaging	Het
Ccdc13	T	A	9: 121,637,254 (GRCm39)	D75V	probably damaging	Het
Col4a4	C	T	1: 82,471,312 (GRCm39)	G681E	unknown	Het
Crh	T	C	3: 19,748,171 (GRCm39)	H157R	probably damaging	Het
Cstdc6	T	C	16: 36,142,205 (GRCm39)	D57G	probably damaging	Het
Dpp4	G	A	2: 62,190,680 (GRCm39)	T392I	probably damaging	Het
Ehd3	G	T	17: 74,127,498 (GRCm39)	A144S	probably benign	Het
Fnip2	A	T	3: 79,373,015 (GRCm39)	I1021N	probably damaging	Het
Fus	T	A	7: 127,584,719 (GRCm39)		probably benign	Het
Glo1	T	C	17: 30,819,047 (GRCm39)	T92A	probably benign	Het
Gm11595	G	A	11: 99,663,381 (GRCm39)	R100C	unknown	Het
Gm15130	A	C	2: 110,965,754 (GRCm39)	M165R	unknown	Het
Gon4l	T	C	3: 88,794,897 (GRCm39)	L700P	probably damaging	Het
Grm1	C	A	10: 10,608,936 (GRCm39)	D566Y	possibly damaging	Het
Guca1b	T	C	17: 47,702,195 (GRCm39)		probably benign	Het
Has3	A	G	8: 107,600,747 (GRCm39)	M70V	probably damaging	Het
Hydin	G	T	8: 111,178,612 (GRCm39)	C1069F	possibly damaging	Het
Ints1	A	C	5: 139,750,137 (GRCm39)	L920R	probably damaging	Het
Kdm2a	T	C	19: 4,381,297 (GRCm39)	I54V	probably benign	Het
Kpna2	G	A	11: 106,881,658 (GRCm39)	T324I	probably damaging	Het
Lrr1	T	C	12: 69,221,428 (GRCm39)	L190S	probably damaging	Het
Lrrc49	A	T	9: 60,594,461 (GRCm39)	H16Q	probably benign	Het
Mab21l4	C	T	1: 93,087,575 (GRCm39)	D93N	probably benign	Het
Mapkap1	A	G	2: 34,334,360 (GRCm39)	E147G	probably damaging	Het
Mrpl2	C	T	17: 46,959,992 (GRCm39)	R219W	possibly damaging	Het
Muc21	A	G	17: 35,932,224 (GRCm39)		probably benign	Het
Ndc80	A	G	17: 71,828,130 (GRCm39)	S66P	probably benign	Het
Notch1	A	G	2: 26,358,638 (GRCm39)	Y1398H	probably damaging	Het
Or6b9	T	A	7: 106,555,955 (GRCm39)	T63S	probably benign	Het
Pde7a	T	C	3: 19,314,420 (GRCm39)	T59A	probably damaging	Het
Plekhg1	G	A	10: 3,906,654 (GRCm39)	V524I	probably benign	Het
Plin4	T	A	17: 56,413,777 (GRCm39)	M283L	probably benign	Het
Prp2	C	T	6: 132,577,606 (GRCm39)	P298S	unknown	Het
Rap1gap2	G	A	11: 74,286,651 (GRCm39)	R550C	probably damaging	Het
Reln	G	A	5: 22,216,161 (GRCm39)	T1008I	probably damaging	Het
Rffl	T	C	11: 82,703,615 (GRCm39)	K103E	probably damaging	Het
Rmnd5b	A	T	11: 51,517,887 (GRCm39)	F156I	probably damaging	Het
Rtn4ip1	T	C	10: 43,778,461 (GRCm39)	I68T	probably damaging	Het
Samhd1	T	C	2: 156,951,412 (GRCm39)	I442V	possibly damaging	Het
Slc12a4	A	T	8: 106,677,326 (GRCm39)		probably null	Het
Slc35b1	G	T	11: 95,275,814 (GRCm39)		probably benign	Het
Ssh1	A	G	5: 114,088,606 (GRCm39)	V354A	probably damaging	Het
Stk33	T	C	7: 108,935,334 (GRCm39)	K153E	possibly damaging	Het
Stk4	C	T	2: 163,952,199 (GRCm39)	R19*	probably null	Het
Tas2r136	A	T	6: 132,754,374 (GRCm39)	I251N	probably damaging	Het
Tbr1	A	T	2: 61,635,244 (GRCm39)	T65S	probably benign	Het
Tkt	C	T	14: 30,282,575 (GRCm39)	S124F	probably damaging	Het
Tll1	T	C	8: 64,555,000 (GRCm39)	I228V	possibly damaging	Het
Tmem236	A	G	2: 14,179,644 (GRCm39)	I82V	probably benign	Het
Vmn2r110	T	C	17: 20,800,899 (GRCm39)	Q511R	probably benign	Het
Vmn2r98	T	C	17: 19,300,981 (GRCm39)	M661T	probably benign	Het
Vps13a	T	A	19: 16,655,334 (GRCm39)	K1898I	probably damaging	Het
Zc3h12a	T	C	4: 125,020,558 (GRCm39)	E95G	probably benign	Het

Other mutations in Olfml2b

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00422:Olfml2b	APN	1	170,496,635 (GRCm39)	missense	probably damaging	0.96
IGL01871:Olfml2b	APN	1	170,489,924 (GRCm39)	splice site	probably benign
IGL02475:Olfml2b	APN	1	170,509,743 (GRCm39)	missense	probably damaging	1.00
IGL02657:Olfml2b	APN	1	170,508,645 (GRCm39)	missense	probably benign	0.00
IGL03375:Olfml2b	APN	1	170,477,401 (GRCm39)	missense	probably benign	0.35
PIT4280001:Olfml2b	UTSW	1	170,475,305 (GRCm39)	missense	probably damaging	1.00
R0040:Olfml2b	UTSW	1	170,496,320 (GRCm39)	missense	probably benign	0.00
R0194:Olfml2b	UTSW	1	170,508,684 (GRCm39)	missense	possibly damaging	0.89
R0834:Olfml2b	UTSW	1	170,475,413 (GRCm39)	missense	probably benign	0.00
R1218:Olfml2b	UTSW	1	170,477,351 (GRCm39)	missense	probably damaging	1.00
R1386:Olfml2b	UTSW	1	170,508,731 (GRCm39)	missense	probably damaging	0.97
R1420:Olfml2b	UTSW	1	170,496,596 (GRCm39)	missense	probably benign	0.01
R1699:Olfml2b	UTSW	1	170,472,642 (GRCm39)	missense	possibly damaging	0.89
R1730:Olfml2b	UTSW	1	170,509,358 (GRCm39)	missense	probably damaging	1.00
R1755:Olfml2b	UTSW	1	170,509,346 (GRCm39)	missense	probably damaging	1.00
R1869:Olfml2b	UTSW	1	170,496,812 (GRCm39)	missense	probably damaging	0.96
R2295:Olfml2b	UTSW	1	170,490,107 (GRCm39)	splice site	probably benign
R2394:Olfml2b	UTSW	1	170,477,319 (GRCm39)	missense	possibly damaging	0.82
R3784:Olfml2b	UTSW	1	170,509,551 (GRCm39)	missense	probably damaging	0.96
R4523:Olfml2b	UTSW	1	170,496,791 (GRCm39)	missense	probably benign
R4611:Olfml2b	UTSW	1	170,472,516 (GRCm39)	missense	probably damaging	0.99
R4900:Olfml2b	UTSW	1	170,489,947 (GRCm39)	missense	probably damaging	1.00
R5201:Olfml2b	UTSW	1	170,496,433 (GRCm39)	missense	probably benign
R5245:Olfml2b	UTSW	1	170,496,443 (GRCm39)	missense	probably benign
R5268:Olfml2b	UTSW	1	170,477,330 (GRCm39)	missense	probably damaging	1.00
R5348:Olfml2b	UTSW	1	170,489,995 (GRCm39)	missense	probably benign	0.02
R5408:Olfml2b	UTSW	1	170,472,545 (GRCm39)	missense	probably damaging	1.00
R5673:Olfml2b	UTSW	1	170,509,698 (GRCm39)	missense	probably damaging	1.00
R5758:Olfml2b	UTSW	1	170,496,833 (GRCm39)	critical splice donor site	probably null
R5893:Olfml2b	UTSW	1	170,490,042 (GRCm39)	missense	probably benign
R6290:Olfml2b	UTSW	1	170,477,359 (GRCm39)	nonsense	probably null
R6380:Olfml2b	UTSW	1	170,496,800 (GRCm39)	missense	probably benign	0.00
R6778:Olfml2b	UTSW	1	170,472,639 (GRCm39)	missense	probably damaging	1.00
R7155:Olfml2b	UTSW	1	170,494,354 (GRCm39)	missense	probably benign	0.01
R7538:Olfml2b	UTSW	1	170,477,402 (GRCm39)	missense	possibly damaging	0.79
R8354:Olfml2b	UTSW	1	170,509,793 (GRCm39)	missense	possibly damaging	0.96
R8377:Olfml2b	UTSW	1	170,496,353 (GRCm39)	missense	probably damaging	0.99
R8792:Olfml2b	UTSW	1	170,508,669 (GRCm39)	missense	possibly damaging	0.68

Predicted Primers

PCR Primer
(F):5'- ACCTCTCTTCTCCATTAGGAAGG -3'
(R):5'- GGTTCAAGCTCATCCGTATCC -3'

Sequencing Primer
(F):5'- CTCTTCTCCATTAGGAAGGTGCAAG -3'
(R):5'- TATCCCCGGACCTGGAAC -3'

Posted On

2016-07-22