Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL03001:Cnbd2'

407369

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Cnbd2

Ensembl Gene

ENSMUSG00000038085

Gene Name

cyclic nucleotide binding domain containing 2

Synonyms

4921517L17Rik, 5430421B09Rik

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.067) question?

Stock #

IGL03001

Quality Score

Status

Chromosome

Chromosomal Location

156154219-156217558 bp(+) (GRCm39)

Type of Mutation

critical splice donor site (2 bp from exon)

DNA Base Change (assembly)

T to C at 156175554 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000105208 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000037096] [ENSMUST00000073942] [ENSMUST00000109580]

AlphaFold

Q9D5U8

Predicted Effect

probably null
Transcript: ENSMUST00000037096

SMART Domains

Protein: ENSMUSP00000041268
Gene: ENSMUSG00000038085

Domain	Start	End	E-Value	Type
low complexity region	45	68	N/A	INTRINSIC
cNMP	206	332	1.78e-7	SMART
Blast:cNMP	376	443	4e-19	BLAST

Predicted Effect

probably null
Transcript: ENSMUST00000073942

SMART Domains

Protein: ENSMUSP00000073598
Gene: ENSMUSG00000038085

Domain	Start	End	E-Value	Type
cNMP	89	215	1.78e-7	SMART

Predicted Effect

probably null
Transcript: ENSMUST00000109580

SMART Domains

Protein: ENSMUSP00000105208
Gene: ENSMUSG00000038085

Domain	Start	End	E-Value	Type
cNMP	77	203	1.78e-7	SMART
Blast:cNMP	247	314	3e-19	BLAST

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000125395

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000131801

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000154227

Coding Region Coverage

Validation Efficiency

MGI Phenotype

PHENOTYPE: Mice homozygous for a knock-out allele exhibit reduced male fertility associated with impaired spermiogenesis and development of flagellum bending. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 63 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acan	A	C	7: 78,761,042 (GRCm39)	D1918A	probably damaging	Het
Ahcy	C	A	2: 154,906,748 (GRCm39)	D182Y	probably damaging	Het
Aldob	T	G	4: 49,542,844 (GRCm39)	D110A	probably damaging	Het
Alkbh8	A	T	9: 3,344,602 (GRCm39)	M53L	probably benign	Het
Aqr	T	C	2: 113,977,400 (GRCm39)	D363G	probably benign	Het
Asxl3	A	G	18: 22,650,455 (GRCm39)	R815G	probably damaging	Het
Atf4	T	A	15: 80,140,858 (GRCm39)	W83R	probably damaging	Het
Baz1a	A	T	12: 54,969,896 (GRCm39)	M587K	possibly damaging	Het
Btbd8	T	C	5: 107,645,708 (GRCm39)	I9T	probably damaging	Het
Cactin	T	A	10: 81,161,568 (GRCm39)	I700N	probably damaging	Het
Catsperg2	T	C	7: 29,424,504 (GRCm39)	S95G	probably benign	Het
Cd1d1	C	T	3: 86,905,468 (GRCm39)	S175N	probably benign	Het
Chd4	C	A	6: 125,078,529 (GRCm39)	A217E	possibly damaging	Het
Cntnap5c	G	A	17: 58,362,634 (GRCm39)	C329Y	probably damaging	Het
Col12a1	C	T	9: 79,540,955 (GRCm39)	G2391R	probably damaging	Het
Col5a3	T	A	9: 20,719,040 (GRCm39)	D238V	unknown	Het
Cuedc1	T	C	11: 88,073,315 (GRCm39)	V160A	probably benign	Het
Depdc5	T	C	5: 33,102,434 (GRCm39)	V342A	possibly damaging	Het
Dnah6	T	C	6: 73,126,123 (GRCm39)	D1338G	probably benign	Het
Dpyd	T	C	3: 118,710,891 (GRCm39)	V433A	probably benign	Het
Epb41l5	T	C	1: 119,545,374 (GRCm39)	H179R	probably damaging	Het
Fbf1	T	C	11: 116,056,712 (GRCm39)		probably benign	Het
Flnb	T	C	14: 7,934,680 (GRCm38)	S2251P	probably damaging	Het
Fsip2	A	T	2: 82,820,968 (GRCm39)		probably benign	Het
Grin2b	C	T	6: 135,716,113 (GRCm39)	V735M	probably damaging	Het
Itpr3	T	G	17: 27,308,586 (GRCm39)		probably benign	Het
Lingo4	C	T	3: 94,309,703 (GRCm39)	R214C	probably damaging	Het
Lrp1b	C	T	2: 40,817,901 (GRCm39)	R2329H	probably damaging	Het
Lrrc47	T	C	4: 154,100,450 (GRCm39)	L342P	probably damaging	Het
Mmp15	T	C	8: 96,094,845 (GRCm39)	S240P	probably damaging	Het
Ndufaf4	T	A	4: 24,901,747 (GRCm39)	N95K	probably benign	Het
Nms	C	T	1: 38,980,993 (GRCm39)	P60S	probably benign	Het
Npas3	A	T	12: 53,547,975 (GRCm39)	Y77F	probably damaging	Het
Or2ak7	T	G	11: 58,574,702 (GRCm39)	M1R	probably null	Het
Or51f5	G	T	7: 102,424,460 (GRCm39)	C243F	probably damaging	Het
Or5d43	T	A	2: 88,105,189 (GRCm39)	D68V	probably damaging	Het
Or8d2b	A	G	9: 38,789,374 (GRCm39)	M301V	probably benign	Het
Or9m2	T	A	2: 87,820,493 (GRCm39)	Y13N	probably benign	Het
Or9s27	T	A	1: 92,516,273 (GRCm39)	S74T	probably damaging	Het
Picalm	T	C	7: 89,831,454 (GRCm39)	V429A	probably benign	Het
Pkhd1l1	T	A	15: 44,421,400 (GRCm39)	I3056N	probably damaging	Het
Pomt1	G	T	2: 32,134,338 (GRCm39)	M286I	probably benign	Het
Popdc2	A	T	16: 38,189,881 (GRCm39)	Y176F	probably benign	Het
Psg21	A	T	7: 18,386,410 (GRCm39)	M192K	probably benign	Het
Psma1	C	A	7: 113,865,674 (GRCm39)	A219S	probably benign	Het
Rad21l	T	G	2: 151,510,389 (GRCm39)	H22P	probably damaging	Het
Rnf213	A	G	11: 119,370,767 (GRCm39)	T4791A	probably damaging	Het
Sdk2	A	G	11: 113,712,452 (GRCm39)	V1609A	probably benign	Het
Sema3e	T	A	5: 14,291,057 (GRCm39)	S606T	probably benign	Het
Slc16a4	A	T	3: 107,218,858 (GRCm39)	R486S	possibly damaging	Het
Slc17a3	T	C	13: 24,040,767 (GRCm39)	L331P	probably damaging	Het
Slc38a11	A	T	2: 65,184,159 (GRCm39)	V164D	probably damaging	Het
Slc38a6	A	G	12: 73,383,827 (GRCm39)	I173V	probably benign	Het
Synpo2	T	C	3: 122,873,604 (GRCm39)	T1121A	probably benign	Het
Tfcp2	T	C	15: 100,426,302 (GRCm39)	D83G	possibly damaging	Het
Thnsl1	A	G	2: 21,216,455 (GRCm39)	T70A	probably damaging	Het
Tnfrsf21	A	G	17: 43,398,786 (GRCm39)	I631V	probably damaging	Het
Tor2a	C	A	2: 32,647,329 (GRCm39)	H6Q	possibly damaging	Het
Ttn	T	C	2: 76,565,267 (GRCm39)	N19993S	probably benign	Het
Vps53	T	C	11: 76,029,150 (GRCm39)	E119G	probably damaging	Het
Zkscan6	T	C	11: 65,705,495 (GRCm39)	W69R	probably damaging	Het
Zng1	T	C	19: 24,900,002 (GRCm39)	K301E	probably benign	Het
Zswim8	T	C	14: 20,764,459 (GRCm39)	S610P	probably damaging	Het

Other mutations in Cnbd2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01146:Cnbd2	APN	2	156,154,534 (GRCm39)	unclassified	probably benign
IGL01472:Cnbd2	APN	2	156,217,268 (GRCm39)	missense	probably damaging	1.00
IGL01738:Cnbd2	APN	2	156,217,537 (GRCm39)	utr 3 prime	probably benign
IGL01825:Cnbd2	APN	2	156,180,629 (GRCm39)	missense	probably damaging	1.00
IGL03057:Cnbd2	APN	2	156,209,592 (GRCm39)	missense	possibly damaging	0.80
R1006:Cnbd2	UTSW	2	156,170,328 (GRCm39)	missense	possibly damaging	0.86
R1080:Cnbd2	UTSW	2	156,181,193 (GRCm39)	missense	probably benign	0.28
R1428:Cnbd2	UTSW	2	156,181,204 (GRCm39)	critical splice donor site	probably null
R1592:Cnbd2	UTSW	2	156,177,322 (GRCm39)	missense	probably benign	0.30
R1601:Cnbd2	UTSW	2	156,175,551 (GRCm39)	missense	probably damaging	0.98
R1637:Cnbd2	UTSW	2	156,215,644 (GRCm39)	missense	probably damaging	1.00
R2259:Cnbd2	UTSW	2	156,177,192 (GRCm39)	missense	probably damaging	1.00
R2352:Cnbd2	UTSW	2	156,177,275 (GRCm39)	missense	probably damaging	1.00
R4106:Cnbd2	UTSW	2	156,177,318 (GRCm39)	missense	probably damaging	1.00
R4109:Cnbd2	UTSW	2	156,177,318 (GRCm39)	missense	probably damaging	1.00
R4479:Cnbd2	UTSW	2	156,175,573 (GRCm39)	intron	probably benign
R4857:Cnbd2	UTSW	2	156,209,485 (GRCm39)	missense	probably benign	0.01
R4893:Cnbd2	UTSW	2	156,207,104 (GRCm39)	missense	probably damaging	0.97
R4899:Cnbd2	UTSW	2	156,181,141 (GRCm39)	missense	probably benign	0.00
R5070:Cnbd2	UTSW	2	156,177,318 (GRCm39)	missense	probably damaging	1.00
R5446:Cnbd2	UTSW	2	156,209,581 (GRCm39)	missense	possibly damaging	0.95
R5784:Cnbd2	UTSW	2	156,180,577 (GRCm39)	missense	probably damaging	1.00
R6197:Cnbd2	UTSW	2	156,217,494 (GRCm39)	missense	possibly damaging	0.86
R7009:Cnbd2	UTSW	2	156,161,954 (GRCm39)	missense	probably benign	0.00
R7221:Cnbd2	UTSW	2	156,215,581 (GRCm39)	missense	probably benign	0.01
R7577:Cnbd2	UTSW	2	156,170,296 (GRCm39)	missense	possibly damaging	0.93
R7699:Cnbd2	UTSW	2	156,217,326 (GRCm39)	missense	probably benign	0.00
R8146:Cnbd2	UTSW	2	156,170,281 (GRCm39)	missense	probably damaging	1.00
R8893:Cnbd2	UTSW	2	156,154,460 (GRCm39)	missense	unknown
R9135:Cnbd2	UTSW	2	156,217,488 (GRCm39)	missense	probably damaging	0.97
R9715:Cnbd2	UTSW	2	156,183,547 (GRCm39)	missense	probably benign	0.13
R9734:Cnbd2	UTSW	2	156,180,540 (GRCm39)	missense	possibly damaging	0.91
X0002:Cnbd2	UTSW	2	156,180,617 (GRCm39)	missense	probably benign	0.22

Posted On

2016-08-02