Incidental Mutation 'IGL03136:Spam1'
ID 410551
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Spam1
Ensembl Gene ENSMUSG00000029682
Gene Name sperm adhesion molecule 1
Synonyms Ph-20
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # IGL03136
Quality Score
Status
Chromosome 6
Chromosomal Location 24791187-24801047 bp(+) (GRCm39)
Type of Mutation splice site
DNA Base Change (assembly) C to T at 24797010 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000143970 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000031693] [ENSMUST00000202331] [ENSMUST00000202569]
AlphaFold P48794
Predicted Effect probably benign
Transcript: ENSMUST00000031693
SMART Domains Protein: ENSMUSP00000031693
Gene: ENSMUSG00000029682

DomainStartEndE-ValueType
Pfam:Glyco_hydro_56 42 373 4.5e-136 PFAM
Blast:EGF 376 439 5e-13 BLAST
Predicted Effect probably benign
Transcript: ENSMUST00000202331
SMART Domains Protein: ENSMUSP00000143944
Gene: ENSMUSG00000029682

DomainStartEndE-ValueType
Pfam:Glyco_hydro_56 42 373 4.5e-136 PFAM
Blast:EGF 376 439 5e-13 BLAST
Predicted Effect probably benign
Transcript: ENSMUST00000202569
SMART Domains Protein: ENSMUSP00000143970
Gene: ENSMUSG00000029682

DomainStartEndE-ValueType
Pfam:Glyco_hydro_56 42 373 4.5e-136 PFAM
Blast:EGF 376 439 5e-13 BLAST
Predicted Effect noncoding transcript
Transcript: ENSMUST00000202786
Coding Region Coverage
Validation Efficiency
MGI Phenotype PHENOTYPE: Male homozygotes for a targeted null mutation are normally fertile, but in vitro their sperm are slower at clearing cells from the cumulus mass. [provided by MGI curators]
Allele List at MGI

All alleles(1) : Targeted, knock-out(1)

Other mutations in this stock
Total: 45 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
5730522E02Rik A G 11: 25,719,122 (GRCm39) L7S unknown Het
Abr C T 11: 76,316,121 (GRCm39) W571* probably null Het
Adam18 A T 8: 25,131,852 (GRCm39) C420S probably damaging Het
Akap5 G T 12: 76,376,649 (GRCm39) E694* probably null Het
Bbs1 T C 19: 4,941,019 (GRCm39) K565R probably benign Het
Brix1 A G 15: 10,478,852 (GRCm39) F189S probably damaging Het
Cnot4 C A 6: 35,028,176 (GRCm39) R480L probably damaging Het
Ctu2 A G 8: 123,205,940 (GRCm39) probably benign Het
Dhcr7 A G 7: 143,401,103 (GRCm39) H422R probably damaging Het
Dock1 A G 7: 134,770,118 (GRCm39) M1793V probably benign Het
Dock7 A G 4: 98,892,028 (GRCm39) F853L probably damaging Het
Fkbp15 G A 4: 62,258,466 (GRCm39) probably benign Het
Ftsj3 C T 11: 106,144,639 (GRCm39) D117N probably damaging Het
Gphn A G 12: 78,528,107 (GRCm39) I142V possibly damaging Het
Hsd3b1 G A 3: 98,760,301 (GRCm39) A230V probably damaging Het
Hydin G A 8: 111,145,156 (GRCm39) A836T probably benign Het
Ift52 G T 2: 162,867,254 (GRCm39) E71* probably null Het
Ms4a14 T C 19: 11,281,775 (GRCm39) D261G possibly damaging Het
Nid1 G A 13: 13,675,084 (GRCm39) V935I probably benign Het
Nrap T C 19: 56,330,687 (GRCm39) K1008E possibly damaging Het
Nup210 A C 6: 91,005,843 (GRCm39) V1340G probably benign Het
Or2aj4 A T 16: 19,385,103 (GRCm39) F177I probably damaging Het
Or5b94 T A 19: 12,652,331 (GRCm39) I254N probably damaging Het
Or8d6 T C 9: 39,854,332 (GRCm39) Y259H probably damaging Het
Pcdhb15 C A 18: 37,608,067 (GRCm39) T433N probably damaging Het
Pdcd6ip T A 9: 113,520,567 (GRCm39) N139I probably damaging Het
Pgbd1 A G 13: 21,617,609 (GRCm39) V80A possibly damaging Het
Pigw A G 11: 84,768,603 (GRCm39) I242T probably benign Het
Prtg T G 9: 72,764,267 (GRCm39) V580G possibly damaging Het
Ptpn13 T A 5: 103,691,329 (GRCm39) N1065K possibly damaging Het
Qrich1 G A 9: 108,422,117 (GRCm39) R577H probably damaging Het
Ryr3 G A 2: 112,506,319 (GRCm39) probably benign Het
Selenoi T C 5: 30,462,725 (GRCm39) Y197H probably damaging Het
Slc47a2 A G 11: 61,201,591 (GRCm39) C343R probably benign Het
Smurf2 A T 11: 106,721,874 (GRCm39) D527E probably benign Het
Stkld1 T C 2: 26,841,435 (GRCm39) V460A probably benign Het
Tgoln1 G A 6: 72,591,096 (GRCm39) R339W probably damaging Het
Tprg1 T C 16: 25,231,512 (GRCm39) probably benign Het
Treml1 T G 17: 48,671,879 (GRCm39) probably benign Het
Ttc39b A T 4: 83,155,517 (GRCm39) V497E probably damaging Het
Vmn1r223 A G 13: 23,433,933 (GRCm39) T176A possibly damaging Het
Vmn2r75 A T 7: 85,797,911 (GRCm39) I634N possibly damaging Het
Vps13c A G 9: 67,857,592 (GRCm39) E2608G probably damaging Het
Zfp575 A G 7: 24,285,381 (GRCm39) C87R probably damaging Het
Zfp790 T A 7: 29,529,320 (GRCm39) Y668* probably null Het
Other mutations in Spam1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00535:Spam1 APN 6 24,796,722 (GRCm39) nonsense probably null
IGL02152:Spam1 APN 6 24,800,802 (GRCm39) utr 3 prime probably benign
IGL02377:Spam1 APN 6 24,796,696 (GRCm39) missense probably damaging 1.00
IGL02666:Spam1 APN 6 24,796,123 (GRCm39) missense possibly damaging 0.67
IGL02968:Spam1 APN 6 24,796,442 (GRCm39) missense possibly damaging 0.84
IGL03004:Spam1 APN 6 24,796,913 (GRCm39) missense probably damaging 1.00
I2288:Spam1 UTSW 6 24,796,477 (GRCm39) missense probably benign 0.00
I2289:Spam1 UTSW 6 24,796,477 (GRCm39) missense probably benign 0.00
R0279:Spam1 UTSW 6 24,800,418 (GRCm39) missense probably benign
R0454:Spam1 UTSW 6 24,797,837 (GRCm39) missense probably damaging 0.99
R0486:Spam1 UTSW 6 24,796,394 (GRCm39) missense probably damaging 1.00
R0734:Spam1 UTSW 6 24,796,948 (GRCm39) missense probably benign 0.17
R0811:Spam1 UTSW 6 24,796,886 (GRCm39) missense probably damaging 1.00
R0812:Spam1 UTSW 6 24,796,886 (GRCm39) missense probably damaging 1.00
R1294:Spam1 UTSW 6 24,796,906 (GRCm39) missense probably benign 0.12
R1703:Spam1 UTSW 6 24,796,256 (GRCm39) missense probably damaging 1.00
R2156:Spam1 UTSW 6 24,796,267 (GRCm39) missense probably damaging 1.00
R2163:Spam1 UTSW 6 24,796,846 (GRCm39) missense probably benign 0.33
R2762:Spam1 UTSW 6 24,796,642 (GRCm39) missense possibly damaging 0.94
R2970:Spam1 UTSW 6 24,796,724 (GRCm39) missense probably damaging 1.00
R4646:Spam1 UTSW 6 24,800,586 (GRCm39) missense probably benign 0.01
R4664:Spam1 UTSW 6 24,796,661 (GRCm39) missense probably benign 0.01
R4923:Spam1 UTSW 6 24,796,655 (GRCm39) missense probably damaging 1.00
R5452:Spam1 UTSW 6 24,800,731 (GRCm39) missense probably benign 0.00
R5589:Spam1 UTSW 6 24,796,109 (GRCm39) missense probably benign 0.01
R5591:Spam1 UTSW 6 24,800,545 (GRCm39) missense probably damaging 0.99
R5861:Spam1 UTSW 6 24,796,570 (GRCm39) missense probably benign
R6481:Spam1 UTSW 6 24,796,929 (GRCm39) missense probably benign 0.01
R6564:Spam1 UTSW 6 24,796,355 (GRCm39) missense possibly damaging 0.90
R6754:Spam1 UTSW 6 24,796,315 (GRCm39) missense probably damaging 0.97
R7103:Spam1 UTSW 6 24,800,583 (GRCm39) missense probably benign 0.00
R7462:Spam1 UTSW 6 24,796,907 (GRCm39) missense probably damaging 0.99
R7559:Spam1 UTSW 6 24,800,452 (GRCm39) missense probably damaging 1.00
R8127:Spam1 UTSW 6 24,796,970 (GRCm39) missense possibly damaging 0.95
R8677:Spam1 UTSW 6 24,796,984 (GRCm39) missense probably benign 0.13
R9356:Spam1 UTSW 6 24,800,565 (GRCm39) missense probably damaging 1.00
R9783:Spam1 UTSW 6 24,796,226 (GRCm39) missense probably benign 0.01
X0022:Spam1 UTSW 6 24,797,885 (GRCm39) missense possibly damaging 0.52
Z1176:Spam1 UTSW 6 24,800,322 (GRCm39) missense probably damaging 1.00
Posted On 2016-08-02