Incidental Mutation 'IGL03151:Vmn1r170'
| ID |
411092 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Vmn1r170
|
| Ensembl Gene |
ENSMUSG00000094187 |
| Gene Name |
vomeronasal 1 receptor 170 |
| Synonyms |
Gm5999 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.064)
|
| Stock # |
IGL03151
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
7 |
| Chromosomal Location |
23305600-23306514 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
G to A
at 23306002 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Valine to Methionine
at position 135
(V135M)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000127655
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000170166]
|
| AlphaFold |
K7N6W9 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000170166
AA Change: V135M
PolyPhen 2
Score 0.348 (Sensitivity: 0.90; Specificity: 0.89)
|
| SMART Domains |
Protein: ENSMUSP00000127655
Gene: ENSMUSG00000094187
AA Change: V135M
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:TAS2R
|
8 |
296 |
1.8e-13 |
PFAM |
|
Pfam:7tm_1
|
30 |
287 |
3.6e-6 |
PFAM |
|
Pfam:V1R
|
42 |
295 |
1.4e-20 |
PFAM |
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 34 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Acot1 |
G |
A |
12: 84,061,326 (GRCm39) |
A211T |
probably damaging |
Het |
| Ampd1 |
T |
C |
3: 102,999,786 (GRCm39) |
|
probably null |
Het |
| Armc3 |
T |
G |
2: 19,243,509 (GRCm39) |
L75R |
probably damaging |
Het |
| Atp9b |
T |
C |
18: 80,820,065 (GRCm39) |
D573G |
probably benign |
Het |
| Baz1a |
T |
A |
12: 54,955,934 (GRCm39) |
|
probably null |
Het |
| C1ra |
A |
T |
6: 124,496,730 (GRCm39) |
I389F |
probably benign |
Het |
| Ccdc87 |
T |
A |
19: 4,891,585 (GRCm39) |
N692K |
probably benign |
Het |
| Ccr9 |
A |
G |
9: 123,603,638 (GRCm39) |
|
probably benign |
Het |
| Ces4a |
G |
T |
8: 105,874,829 (GRCm39) |
|
probably null |
Het |
| Dazap1 |
G |
A |
10: 80,116,754 (GRCm39) |
|
probably benign |
Het |
| Dock5 |
A |
G |
14: 68,103,516 (GRCm39) |
Y45H |
probably damaging |
Het |
| Eloa |
A |
T |
4: 135,737,732 (GRCm39) |
Y409* |
probably null |
Het |
| Fam170a |
A |
G |
18: 50,414,708 (GRCm39) |
E118G |
probably damaging |
Het |
| Fut2 |
C |
T |
7: 45,300,193 (GRCm39) |
G193E |
possibly damaging |
Het |
| Glra1 |
C |
T |
11: 55,418,206 (GRCm39) |
V180I |
probably damaging |
Het |
| Il17rb |
T |
C |
14: 29,728,810 (GRCm39) |
T28A |
probably benign |
Het |
| Ints9 |
T |
A |
14: 65,269,789 (GRCm39) |
V493E |
possibly damaging |
Het |
| Kcnq5 |
C |
T |
1: 21,605,293 (GRCm39) |
C204Y |
probably damaging |
Het |
| Npc1 |
A |
T |
18: 12,352,332 (GRCm39) |
N122K |
probably benign |
Het |
| Or2b4 |
G |
A |
17: 38,116,159 (GRCm39) |
G41D |
probably damaging |
Het |
| Podnl1 |
G |
A |
8: 84,858,818 (GRCm39) |
V548I |
probably benign |
Het |
| Prss21 |
A |
G |
17: 24,088,376 (GRCm39) |
T114A |
probably damaging |
Het |
| Prss59 |
A |
G |
6: 40,902,946 (GRCm39) |
F142S |
probably damaging |
Het |
| Rab10 |
G |
A |
12: 3,299,812 (GRCm39) |
T193M |
probably benign |
Het |
| Serpini1 |
T |
A |
3: 75,520,603 (GRCm39) |
S67T |
probably benign |
Het |
| Slc35b1 |
T |
C |
11: 95,281,212 (GRCm39) |
|
probably null |
Het |
| Sorbs2 |
A |
T |
8: 46,252,750 (GRCm39) |
H388L |
probably benign |
Het |
| Tfap2c |
T |
A |
2: 172,399,110 (GRCm39) |
C427* |
probably null |
Het |
| Trappc14 |
A |
G |
5: 138,260,934 (GRCm39) |
L237S |
possibly damaging |
Het |
| Ttn |
G |
T |
2: 76,632,732 (GRCm39) |
F14107L |
probably damaging |
Het |
| Upf1 |
G |
T |
8: 70,788,037 (GRCm39) |
T774K |
probably damaging |
Het |
| Vmn2r14 |
C |
T |
5: 109,364,260 (GRCm39) |
C552Y |
probably damaging |
Het |
| Zfp367 |
A |
G |
13: 64,293,445 (GRCm39) |
I147T |
probably damaging |
Het |
| Zfp952 |
T |
C |
17: 33,221,982 (GRCm39) |
S116P |
probably benign |
Het |
|
| Other mutations in Vmn1r170 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02005:Vmn1r170
|
APN |
7 |
23,306,338 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02150:Vmn1r170
|
APN |
7 |
23,306,465 (GRCm39) |
nonsense |
probably null |
|
|
IGL02216:Vmn1r170
|
APN |
7 |
23,305,915 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02749:Vmn1r170
|
APN |
7 |
23,305,716 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL02807:Vmn1r170
|
APN |
7 |
23,305,760 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02828:Vmn1r170
|
APN |
7 |
23,305,943 (GRCm39) |
missense |
probably damaging |
0.99 |
|
IGL02971:Vmn1r170
|
APN |
7 |
23,305,759 (GRCm39) |
missense |
possibly damaging |
0.81 |
|
IGL03073:Vmn1r170
|
APN |
7 |
23,306,273 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0079:Vmn1r170
|
UTSW |
7 |
23,305,735 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R0266:Vmn1r170
|
UTSW |
7 |
23,305,906 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0980:Vmn1r170
|
UTSW |
7 |
23,305,759 (GRCm39) |
missense |
possibly damaging |
0.81 |
|
R1345:Vmn1r170
|
UTSW |
7 |
23,305,787 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1620:Vmn1r170
|
UTSW |
7 |
23,305,754 (GRCm39) |
missense |
probably benign |
0.30 |
|
R1713:Vmn1r170
|
UTSW |
7 |
23,306,288 (GRCm39) |
missense |
probably benign |
0.30 |
|
R1745:Vmn1r170
|
UTSW |
7 |
23,305,759 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R1974:Vmn1r170
|
UTSW |
7 |
23,305,906 (GRCm39) |
missense |
probably benign |
0.00 |
|
R2163:Vmn1r170
|
UTSW |
7 |
23,306,462 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3812:Vmn1r170
|
UTSW |
7 |
23,305,717 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4583:Vmn1r170
|
UTSW |
7 |
23,306,087 (GRCm39) |
missense |
probably benign |
0.25 |
|
R5309:Vmn1r170
|
UTSW |
7 |
23,305,880 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R5378:Vmn1r170
|
UTSW |
7 |
23,305,963 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5379:Vmn1r170
|
UTSW |
7 |
23,306,054 (GRCm39) |
missense |
possibly damaging |
0.81 |
|
R5661:Vmn1r170
|
UTSW |
7 |
23,306,231 (GRCm39) |
missense |
possibly damaging |
0.82 |
|
R5673:Vmn1r170
|
UTSW |
7 |
23,305,630 (GRCm39) |
missense |
possibly damaging |
0.58 |
|
R6181:Vmn1r170
|
UTSW |
7 |
23,305,692 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R6192:Vmn1r170
|
UTSW |
7 |
23,305,934 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7467:Vmn1r170
|
UTSW |
7 |
23,306,320 (GRCm39) |
missense |
not run |
|
|
R7667:Vmn1r170
|
UTSW |
7 |
23,306,473 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8458:Vmn1r170
|
UTSW |
7 |
23,306,321 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
R8699:Vmn1r170
|
UTSW |
7 |
23,306,080 (GRCm39) |
nonsense |
probably null |
|
|
R8927:Vmn1r170
|
UTSW |
7 |
23,305,814 (GRCm39) |
missense |
possibly damaging |
0.82 |
|
R8928:Vmn1r170
|
UTSW |
7 |
23,305,814 (GRCm39) |
missense |
possibly damaging |
0.82 |
|
R9269:Vmn1r170
|
UTSW |
7 |
23,306,263 (GRCm39) |
missense |
probably benign |
0.02 |
|
R9569:Vmn1r170
|
UTSW |
7 |
23,306,294 (GRCm39) |
missense |
probably benign |
0.19 |
|
X0060:Vmn1r170
|
UTSW |
7 |
23,306,368 (GRCm39) |
missense |
possibly damaging |
0.50 |
|
Z1176:Vmn1r170
|
UTSW |
7 |
23,305,835 (GRCm39) |
missense |
possibly damaging |
0.89 |
|
| Posted On |
2016-08-02 |
Incidental Mutation