Incidental Mutation 'R0066:Vps8'
ID |
41121 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vps8
|
Ensembl Gene |
ENSMUSG00000033653 |
Gene Name |
VPS8 CORVET complex subunit |
Synonyms |
|
MMRRC Submission |
038357-MU
|
Accession Numbers |
|
Essential gene? |
Essential
(E-score: 1.000)
|
Stock # |
R0066 (G1)
|
Quality Score |
209 |
Status
|
Validated
|
Chromosome |
16 |
Chromosomal Location |
21241868-21463430 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to G
at 21296273 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Glutamic Acid to Glycine
at position 515
(E515G)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000093906
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000096191]
[ENSMUST00000096192]
[ENSMUST00000115397]
[ENSMUST00000117598]
[ENSMUST00000118923]
[ENSMUST00000122235]
|
AlphaFold |
Q0P5W1 |
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000096191
AA Change: E513G
PolyPhen 2
Score 0.708 (Sensitivity: 0.86; Specificity: 0.92)
|
SMART Domains |
Protein: ENSMUSP00000093905 Gene: ENSMUSG00000033653 AA Change: E513G
Domain | Start | End | E-Value | Type |
low complexity region
|
96 |
112 |
N/A |
INTRINSIC |
SCOP:d1g72a_
|
158 |
296 |
1e-8 |
SMART |
Blast:WD40
|
184 |
225 |
7e-22 |
BLAST |
Blast:WD40
|
228 |
268 |
5e-20 |
BLAST |
Pfam:Vps8
|
610 |
794 |
1.7e-61 |
PFAM |
low complexity region
|
992 |
1007 |
N/A |
INTRINSIC |
low complexity region
|
1085 |
1097 |
N/A |
INTRINSIC |
low complexity region
|
1126 |
1137 |
N/A |
INTRINSIC |
Blast:RING
|
1257 |
1277 |
1e-5 |
BLAST |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000096192
AA Change: E515G
PolyPhen 2
Score 0.770 (Sensitivity: 0.85; Specificity: 0.92)
|
SMART Domains |
Protein: ENSMUSP00000093906 Gene: ENSMUSG00000033653 AA Change: E515G
Domain | Start | End | E-Value | Type |
low complexity region
|
96 |
112 |
N/A |
INTRINSIC |
SCOP:d1g72a_
|
158 |
298 |
1e-8 |
SMART |
Blast:WD40
|
186 |
227 |
8e-22 |
BLAST |
Blast:WD40
|
230 |
270 |
5e-20 |
BLAST |
Pfam:Vps8
|
612 |
796 |
1.4e-61 |
PFAM |
low complexity region
|
969 |
979 |
N/A |
INTRINSIC |
low complexity region
|
1057 |
1069 |
N/A |
INTRINSIC |
low complexity region
|
1098 |
1109 |
N/A |
INTRINSIC |
RING
|
1229 |
1280 |
1.23e-4 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000115397
AA Change: E515G
PolyPhen 2
Score 0.304 (Sensitivity: 0.90; Specificity: 0.89)
|
SMART Domains |
Protein: ENSMUSP00000111055 Gene: ENSMUSG00000033653 AA Change: E515G
Domain | Start | End | E-Value | Type |
low complexity region
|
96 |
112 |
N/A |
INTRINSIC |
SCOP:d1g72a_
|
158 |
298 |
8e-9 |
SMART |
Blast:WD40
|
186 |
227 |
8e-22 |
BLAST |
Blast:WD40
|
230 |
270 |
5e-20 |
BLAST |
Pfam:Vps8
|
613 |
796 |
1.3e-61 |
PFAM |
low complexity region
|
994 |
1009 |
N/A |
INTRINSIC |
low complexity region
|
1087 |
1099 |
N/A |
INTRINSIC |
low complexity region
|
1128 |
1139 |
N/A |
INTRINSIC |
RING
|
1259 |
1310 |
1.23e-4 |
SMART |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000117598
AA Change: E513G
PolyPhen 2
Score 0.708 (Sensitivity: 0.86; Specificity: 0.92)
|
SMART Domains |
Protein: ENSMUSP00000112937 Gene: ENSMUSG00000033653 AA Change: E513G
Domain | Start | End | E-Value | Type |
low complexity region
|
96 |
112 |
N/A |
INTRINSIC |
SCOP:d1g72a_
|
158 |
296 |
1e-8 |
SMART |
Blast:WD40
|
184 |
225 |
8e-22 |
BLAST |
Blast:WD40
|
228 |
268 |
5e-20 |
BLAST |
Pfam:Vps8
|
610 |
794 |
1.9e-61 |
PFAM |
low complexity region
|
992 |
1007 |
N/A |
INTRINSIC |
low complexity region
|
1085 |
1097 |
N/A |
INTRINSIC |
low complexity region
|
1126 |
1137 |
N/A |
INTRINSIC |
RING
|
1257 |
1308 |
1.23e-4 |
SMART |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000118923
AA Change: E515G
PolyPhen 2
Score 0.585 (Sensitivity: 0.88; Specificity: 0.91)
|
SMART Domains |
Protein: ENSMUSP00000112636 Gene: ENSMUSG00000033653 AA Change: E515G
Domain | Start | End | E-Value | Type |
low complexity region
|
96 |
112 |
N/A |
INTRINSIC |
SCOP:d1g72a_
|
158 |
298 |
9e-9 |
SMART |
Blast:WD40
|
186 |
227 |
8e-22 |
BLAST |
Blast:WD40
|
230 |
270 |
5e-20 |
BLAST |
Pfam:Vps8
|
612 |
796 |
1.9e-61 |
PFAM |
low complexity region
|
969 |
979 |
N/A |
INTRINSIC |
low complexity region
|
1057 |
1069 |
N/A |
INTRINSIC |
low complexity region
|
1098 |
1109 |
N/A |
INTRINSIC |
RING
|
1229 |
1280 |
1.23e-4 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000122235
|
SMART Domains |
Protein: ENSMUSP00000112622 Gene: ENSMUSG00000033653
Domain | Start | End | E-Value | Type |
low complexity region
|
96 |
112 |
N/A |
INTRINSIC |
WD40
|
184 |
225 |
2.66e0 |
SMART |
WD40
|
228 |
269 |
5.5e1 |
SMART |
low complexity region
|
371 |
386 |
N/A |
INTRINSIC |
low complexity region
|
480 |
491 |
N/A |
INTRINSIC |
|
Predicted Effect |
unknown
Transcript: ENSMUST00000125487
AA Change: E83G
|
SMART Domains |
Protein: ENSMUSP00000114719 Gene: ENSMUSG00000033653 AA Change: E83G
Domain | Start | End | E-Value | Type |
Pfam:Vps8
|
182 |
365 |
8.5e-62 |
PFAM |
low complexity region
|
563 |
578 |
N/A |
INTRINSIC |
low complexity region
|
656 |
668 |
N/A |
INTRINSIC |
low complexity region
|
697 |
708 |
N/A |
INTRINSIC |
RING
|
828 |
879 |
1.23e-4 |
SMART |
|
Meta Mutation Damage Score |
0.5873 |
Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.3%
- 10x: 96.3%
- 20x: 93.0%
|
Validation Efficiency |
100% (107/107) |
Allele List at MGI |
|
Other mutations in this stock |
Total: 104 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
1810064F22Rik |
A |
G |
9: 22,119,177 (GRCm39) |
|
noncoding transcript |
Het |
5530400C23Rik |
A |
T |
6: 133,269,287 (GRCm39) |
|
probably benign |
Het |
Aco2 |
T |
C |
15: 81,787,666 (GRCm39) |
|
probably benign |
Het |
Arap3 |
A |
T |
18: 38,129,760 (GRCm39) |
S134T |
probably benign |
Het |
Arsa |
T |
A |
15: 89,358,539 (GRCm39) |
M288L |
possibly damaging |
Het |
Atg2b |
A |
T |
12: 105,614,708 (GRCm39) |
D1074E |
probably benign |
Het |
Baiap2l1 |
A |
T |
5: 144,221,372 (GRCm39) |
I174N |
probably damaging |
Het |
Bpifb9a |
A |
T |
2: 154,108,761 (GRCm39) |
N421Y |
possibly damaging |
Het |
Btn2a2 |
T |
A |
13: 23,662,655 (GRCm39) |
I432L |
probably benign |
Het |
Ccdc150 |
A |
G |
1: 54,395,850 (GRCm39) |
I778V |
probably benign |
Het |
Cd200r2 |
G |
A |
16: 44,730,037 (GRCm39) |
V194I |
possibly damaging |
Het |
Cep350 |
A |
C |
1: 155,786,964 (GRCm39) |
L1421R |
probably damaging |
Het |
Col24a1 |
G |
A |
3: 145,250,899 (GRCm39) |
A1633T |
probably damaging |
Het |
Col6a6 |
A |
T |
9: 105,579,412 (GRCm39) |
C1938S |
probably damaging |
Het |
Cspg4 |
A |
T |
9: 56,795,418 (GRCm39) |
D1051V |
probably damaging |
Het |
Cstf1 |
T |
A |
2: 172,214,976 (GRCm39) |
N32K |
probably benign |
Het |
Ctrb1 |
G |
A |
8: 112,413,269 (GRCm39) |
R248* |
probably null |
Het |
Cyp2d11 |
T |
A |
15: 82,275,958 (GRCm39) |
M208L |
probably benign |
Het |
Dbt |
A |
G |
3: 116,337,478 (GRCm39) |
Q334R |
probably benign |
Het |
Dcaf12 |
A |
G |
4: 41,298,338 (GRCm39) |
V270A |
probably damaging |
Het |
Dis3l |
T |
A |
9: 64,226,447 (GRCm39) |
N361I |
probably benign |
Het |
Dnah10 |
A |
T |
5: 124,840,140 (GRCm39) |
D1315V |
probably benign |
Het |
Dnah11 |
A |
G |
12: 118,090,621 (GRCm39) |
F1080S |
probably benign |
Het |
Dnm3 |
A |
G |
1: 162,234,930 (GRCm39) |
V70A |
probably damaging |
Het |
Dpy19l1 |
A |
C |
9: 24,325,705 (GRCm39) |
M700R |
possibly damaging |
Het |
Dpy19l2 |
G |
A |
9: 24,557,679 (GRCm39) |
|
probably benign |
Het |
Dst |
C |
A |
1: 34,228,634 (GRCm39) |
H2254N |
possibly damaging |
Het |
Epm2aip1 |
A |
G |
9: 111,101,531 (GRCm39) |
N168S |
probably benign |
Het |
Fchsd2 |
A |
G |
7: 100,927,631 (GRCm39) |
Y691C |
possibly damaging |
Het |
Fndc8 |
A |
T |
11: 82,788,398 (GRCm39) |
D76V |
probably benign |
Het |
Frmd4a |
T |
C |
2: 4,477,963 (GRCm39) |
L48P |
probably damaging |
Het |
Gimap6 |
T |
A |
6: 48,679,404 (GRCm39) |
I211F |
probably damaging |
Het |
Gm15130 |
A |
G |
2: 110,969,284 (GRCm39) |
|
probably benign |
Het |
Gm43302 |
T |
A |
5: 105,438,766 (GRCm39) |
I41F |
probably damaging |
Het |
Gm5698 |
C |
T |
1: 31,016,614 (GRCm39) |
V146I |
probably benign |
Het |
Gpatch1 |
G |
A |
7: 34,986,652 (GRCm39) |
S768L |
probably damaging |
Het |
Grb14 |
T |
G |
2: 64,768,836 (GRCm39) |
|
probably null |
Het |
Hnrnpd |
T |
C |
5: 100,112,560 (GRCm39) |
E222G |
probably damaging |
Het |
Il4ra |
C |
T |
7: 125,175,403 (GRCm39) |
P537L |
possibly damaging |
Het |
Kalrn |
T |
C |
16: 34,024,327 (GRCm39) |
D610G |
probably damaging |
Het |
Kcnh4 |
T |
C |
11: 100,648,626 (GRCm39) |
H26R |
probably benign |
Het |
Kctd2 |
T |
G |
11: 115,320,343 (GRCm39) |
|
probably benign |
Het |
Khdrbs3 |
T |
A |
15: 68,866,886 (GRCm39) |
|
probably benign |
Het |
Macf1 |
G |
A |
4: 123,325,943 (GRCm39) |
Q3066* |
probably null |
Het |
Mfn2 |
G |
A |
4: 147,969,902 (GRCm39) |
|
probably benign |
Het |
Mmab |
T |
C |
5: 114,574,526 (GRCm39) |
|
probably benign |
Het |
Mrc1 |
T |
C |
2: 14,266,011 (GRCm39) |
S310P |
probably benign |
Het |
Mrps21 |
T |
C |
3: 95,770,197 (GRCm39) |
Y44C |
probably null |
Het |
Myh10 |
T |
A |
11: 68,590,317 (GRCm39) |
F121Y |
probably damaging |
Het |
Myo1f |
A |
G |
17: 33,820,677 (GRCm39) |
D840G |
probably damaging |
Het |
Neb |
T |
A |
2: 52,196,542 (GRCm39) |
D553V |
probably damaging |
Het |
Nol6 |
G |
T |
4: 41,119,572 (GRCm39) |
|
probably benign |
Het |
Npr2 |
G |
T |
4: 43,632,329 (GRCm39) |
V49L |
probably benign |
Het |
Ntsr2 |
T |
C |
12: 16,704,120 (GRCm39) |
I207T |
probably benign |
Het |
Nwd1 |
T |
A |
8: 73,438,484 (GRCm39) |
S1552T |
probably benign |
Het |
Oas3 |
T |
A |
5: 120,896,940 (GRCm39) |
I894F |
probably damaging |
Het |
Oprd1 |
A |
G |
4: 131,841,299 (GRCm39) |
F220L |
probably benign |
Het |
Or11j4 |
T |
A |
14: 50,630,659 (GRCm39) |
F149I |
probably benign |
Het |
Or2aj4 |
T |
A |
16: 19,384,799 (GRCm39) |
Y278F |
probably damaging |
Het |
Or2r2 |
A |
T |
6: 42,463,869 (GRCm39) |
M86K |
probably benign |
Het |
Or8b57 |
T |
C |
9: 40,003,983 (GRCm39) |
N93S |
possibly damaging |
Het |
Pkd1l3 |
G |
T |
8: 110,347,103 (GRCm39) |
G159C |
unknown |
Het |
Plcb4 |
T |
C |
2: 135,803,689 (GRCm39) |
S521P |
probably benign |
Het |
Plcl1 |
A |
T |
1: 55,752,634 (GRCm39) |
I993F |
probably damaging |
Het |
Plcxd1 |
T |
A |
5: 110,249,368 (GRCm39) |
V65E |
probably damaging |
Het |
Plekha7 |
T |
C |
7: 115,756,743 (GRCm39) |
S640G |
probably damaging |
Het |
Ptprn2 |
A |
C |
12: 117,240,222 (GRCm39) |
N993T |
probably benign |
Het |
Rabepk |
T |
C |
2: 34,685,318 (GRCm39) |
D26G |
possibly damaging |
Het |
Reck |
A |
G |
4: 43,930,936 (GRCm39) |
N646D |
probably damaging |
Het |
Rfx2 |
A |
T |
17: 57,093,736 (GRCm39) |
|
probably benign |
Het |
Ripk2 |
G |
A |
4: 16,123,868 (GRCm39) |
Q436* |
probably null |
Het |
Ryr1 |
C |
T |
7: 28,704,992 (GRCm39) |
|
probably benign |
Het |
Sema6b |
A |
G |
17: 56,435,271 (GRCm39) |
V324A |
possibly damaging |
Het |
Sik2 |
C |
A |
9: 50,909,833 (GRCm39) |
M73I |
probably benign |
Het |
Slc39a6 |
T |
C |
18: 24,732,326 (GRCm39) |
K321E |
probably damaging |
Het |
Slc7a4 |
C |
A |
16: 17,391,875 (GRCm39) |
V520F |
probably benign |
Het |
Slitrk6 |
A |
T |
14: 110,987,364 (GRCm39) |
L781H |
probably damaging |
Het |
Spink14 |
T |
C |
18: 44,161,830 (GRCm39) |
V2A |
probably benign |
Het |
Sptan1 |
C |
A |
2: 29,893,679 (GRCm39) |
|
probably benign |
Het |
Stab1 |
C |
T |
14: 30,879,027 (GRCm39) |
|
probably benign |
Het |
Tbc1d17 |
C |
T |
7: 44,493,495 (GRCm39) |
|
probably benign |
Het |
Tbcd |
T |
A |
11: 121,394,590 (GRCm39) |
L49* |
probably null |
Het |
Tmco6 |
A |
G |
18: 36,875,160 (GRCm39) |
T477A |
probably benign |
Het |
Tmem208 |
C |
T |
8: 106,054,857 (GRCm39) |
A53V |
probably benign |
Het |
Tpp2 |
A |
G |
1: 44,020,908 (GRCm39) |
T837A |
possibly damaging |
Het |
Tulp4 |
A |
T |
17: 6,252,008 (GRCm39) |
N60I |
probably damaging |
Het |
Ubqlnl |
A |
T |
7: 103,798,145 (GRCm39) |
W451R |
probably damaging |
Het |
Usp53 |
G |
T |
3: 122,746,956 (GRCm39) |
C363* |
probably null |
Het |
Usp7 |
A |
T |
16: 8,509,282 (GRCm39) |
H1017Q |
probably benign |
Het |
Utp4 |
A |
G |
8: 107,649,530 (GRCm39) |
T660A |
possibly damaging |
Het |
Vmn1r194 |
A |
T |
13: 22,428,641 (GRCm39) |
Y86F |
probably benign |
Het |
Vmn1r195 |
A |
T |
13: 22,463,409 (GRCm39) |
H293L |
possibly damaging |
Het |
Vmn1r231 |
T |
C |
17: 21,109,998 (GRCm39) |
R306G |
probably benign |
Het |
Vmn2r63 |
T |
C |
7: 42,576,514 (GRCm39) |
|
probably benign |
Het |
Vmn2r77 |
T |
C |
7: 86,449,964 (GRCm39) |
V70A |
probably benign |
Het |
Vmn2r85 |
T |
C |
10: 130,261,770 (GRCm39) |
D189G |
probably damaging |
Het |
Wdr18 |
C |
A |
10: 79,796,937 (GRCm39) |
Y104* |
probably null |
Het |
Wnk4 |
A |
T |
11: 101,156,261 (GRCm39) |
D43V |
probably damaging |
Het |
Xab2 |
A |
T |
8: 3,663,880 (GRCm39) |
N346K |
probably damaging |
Het |
Xirp2 |
T |
C |
2: 67,342,484 (GRCm39) |
V1575A |
possibly damaging |
Het |
Zdhhc12 |
C |
T |
2: 29,982,547 (GRCm39) |
R50H |
probably damaging |
Het |
Zdhhc8 |
A |
G |
16: 18,043,064 (GRCm39) |
S379P |
probably benign |
Het |
Zfp458 |
G |
A |
13: 67,407,673 (GRCm39) |
Q58* |
probably null |
Het |
Zfp747 |
A |
T |
7: 126,973,772 (GRCm39) |
S133T |
probably benign |
Het |
|
Other mutations in Vps8 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00500:Vps8
|
APN |
16 |
21,261,084 (GRCm39) |
missense |
possibly damaging |
0.47 |
IGL00596:Vps8
|
APN |
16 |
21,267,162 (GRCm39) |
splice site |
probably benign |
|
IGL00985:Vps8
|
APN |
16 |
21,296,334 (GRCm39) |
splice site |
probably benign |
|
IGL01356:Vps8
|
APN |
16 |
21,336,107 (GRCm39) |
critical splice donor site |
probably null |
|
IGL01375:Vps8
|
APN |
16 |
21,378,122 (GRCm39) |
nonsense |
probably null |
|
IGL01643:Vps8
|
APN |
16 |
21,336,972 (GRCm39) |
missense |
possibly damaging |
0.92 |
IGL02159:Vps8
|
APN |
16 |
21,285,234 (GRCm39) |
missense |
possibly damaging |
0.69 |
IGL02214:Vps8
|
APN |
16 |
21,336,035 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02465:Vps8
|
APN |
16 |
21,340,653 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02651:Vps8
|
APN |
16 |
21,336,086 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL03174:Vps8
|
APN |
16 |
21,285,213 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03337:Vps8
|
APN |
16 |
21,381,918 (GRCm39) |
missense |
probably benign |
|
IGL03383:Vps8
|
APN |
16 |
21,254,573 (GRCm39) |
critical splice donor site |
probably null |
|
IGL03402:Vps8
|
APN |
16 |
21,267,148 (GRCm39) |
missense |
possibly damaging |
0.68 |
empires
|
UTSW |
16 |
21,400,298 (GRCm39) |
nonsense |
probably null |
|
porky
|
UTSW |
16 |
21,279,988 (GRCm39) |
missense |
probably benign |
0.32 |
realm
|
UTSW |
16 |
21,363,986 (GRCm39) |
intron |
probably benign |
|
realms
|
UTSW |
16 |
21,262,938 (GRCm39) |
splice site |
probably null |
|
Reich
|
UTSW |
16 |
21,297,189 (GRCm39) |
missense |
probably benign |
0.29 |
reichen
|
UTSW |
16 |
21,325,575 (GRCm39) |
splice site |
probably benign |
|
IGL03052:Vps8
|
UTSW |
16 |
21,267,115 (GRCm39) |
missense |
probably damaging |
0.99 |
PIT4677001:Vps8
|
UTSW |
16 |
21,319,084 (GRCm39) |
missense |
possibly damaging |
0.94 |
R0066:Vps8
|
UTSW |
16 |
21,296,273 (GRCm39) |
missense |
possibly damaging |
0.77 |
R0125:Vps8
|
UTSW |
16 |
21,288,904 (GRCm39) |
missense |
probably benign |
0.00 |
R0137:Vps8
|
UTSW |
16 |
21,323,136 (GRCm39) |
splice site |
probably benign |
|
R0362:Vps8
|
UTSW |
16 |
21,426,977 (GRCm39) |
intron |
probably benign |
|
R0384:Vps8
|
UTSW |
16 |
21,325,575 (GRCm39) |
splice site |
probably benign |
|
R0492:Vps8
|
UTSW |
16 |
21,261,107 (GRCm39) |
missense |
probably damaging |
1.00 |
R0525:Vps8
|
UTSW |
16 |
21,358,859 (GRCm39) |
critical splice donor site |
probably null |
|
R0531:Vps8
|
UTSW |
16 |
21,278,561 (GRCm39) |
intron |
probably benign |
|
R0605:Vps8
|
UTSW |
16 |
21,378,087 (GRCm39) |
missense |
probably benign |
0.00 |
R0636:Vps8
|
UTSW |
16 |
21,253,683 (GRCm39) |
missense |
probably benign |
0.32 |
R0707:Vps8
|
UTSW |
16 |
21,261,107 (GRCm39) |
missense |
probably damaging |
1.00 |
R0840:Vps8
|
UTSW |
16 |
21,275,071 (GRCm39) |
missense |
probably damaging |
0.99 |
R1170:Vps8
|
UTSW |
16 |
21,278,570 (GRCm39) |
intron |
probably benign |
|
R1203:Vps8
|
UTSW |
16 |
21,330,307 (GRCm39) |
missense |
probably damaging |
1.00 |
R1482:Vps8
|
UTSW |
16 |
21,400,348 (GRCm39) |
missense |
probably benign |
0.00 |
R1531:Vps8
|
UTSW |
16 |
21,285,226 (GRCm39) |
nonsense |
probably null |
|
R1642:Vps8
|
UTSW |
16 |
21,400,329 (GRCm39) |
missense |
probably benign |
|
R1956:Vps8
|
UTSW |
16 |
21,279,892 (GRCm39) |
missense |
probably damaging |
1.00 |
R2201:Vps8
|
UTSW |
16 |
21,395,507 (GRCm39) |
missense |
probably damaging |
1.00 |
R2287:Vps8
|
UTSW |
16 |
21,387,163 (GRCm39) |
missense |
probably damaging |
1.00 |
R2423:Vps8
|
UTSW |
16 |
21,378,087 (GRCm39) |
missense |
probably benign |
0.00 |
R3151:Vps8
|
UTSW |
16 |
21,261,123 (GRCm39) |
missense |
probably benign |
0.04 |
R3943:Vps8
|
UTSW |
16 |
21,288,873 (GRCm39) |
missense |
probably damaging |
1.00 |
R3944:Vps8
|
UTSW |
16 |
21,288,873 (GRCm39) |
missense |
probably damaging |
1.00 |
R4043:Vps8
|
UTSW |
16 |
21,345,146 (GRCm39) |
missense |
probably damaging |
1.00 |
R4302:Vps8
|
UTSW |
16 |
21,314,664 (GRCm39) |
missense |
probably damaging |
1.00 |
R4398:Vps8
|
UTSW |
16 |
21,323,216 (GRCm39) |
missense |
probably damaging |
1.00 |
R4477:Vps8
|
UTSW |
16 |
21,363,986 (GRCm39) |
intron |
probably benign |
|
R4478:Vps8
|
UTSW |
16 |
21,363,986 (GRCm39) |
intron |
probably benign |
|
R4479:Vps8
|
UTSW |
16 |
21,363,986 (GRCm39) |
intron |
probably benign |
|
R4480:Vps8
|
UTSW |
16 |
21,363,986 (GRCm39) |
intron |
probably benign |
|
R4571:Vps8
|
UTSW |
16 |
21,254,525 (GRCm39) |
missense |
probably damaging |
1.00 |
R4653:Vps8
|
UTSW |
16 |
21,318,960 (GRCm39) |
missense |
probably damaging |
1.00 |
R4664:Vps8
|
UTSW |
16 |
21,262,938 (GRCm39) |
splice site |
probably null |
|
R4713:Vps8
|
UTSW |
16 |
21,261,189 (GRCm39) |
missense |
probably damaging |
1.00 |
R4726:Vps8
|
UTSW |
16 |
21,267,154 (GRCm39) |
splice site |
probably null |
|
R4959:Vps8
|
UTSW |
16 |
21,278,536 (GRCm39) |
missense |
probably damaging |
1.00 |
R4973:Vps8
|
UTSW |
16 |
21,278,536 (GRCm39) |
missense |
probably damaging |
1.00 |
R4975:Vps8
|
UTSW |
16 |
21,285,219 (GRCm39) |
missense |
probably damaging |
1.00 |
R4992:Vps8
|
UTSW |
16 |
21,280,158 (GRCm39) |
missense |
possibly damaging |
0.52 |
R5144:Vps8
|
UTSW |
16 |
21,378,103 (GRCm39) |
missense |
probably damaging |
1.00 |
R5168:Vps8
|
UTSW |
16 |
21,351,849 (GRCm39) |
missense |
probably benign |
0.05 |
R5168:Vps8
|
UTSW |
16 |
21,276,195 (GRCm39) |
missense |
probably damaging |
0.99 |
R5222:Vps8
|
UTSW |
16 |
21,400,298 (GRCm39) |
nonsense |
probably null |
|
R5231:Vps8
|
UTSW |
16 |
21,395,475 (GRCm39) |
missense |
probably damaging |
1.00 |
R5876:Vps8
|
UTSW |
16 |
21,280,189 (GRCm39) |
critical splice donor site |
probably null |
|
R5963:Vps8
|
UTSW |
16 |
21,288,871 (GRCm39) |
missense |
possibly damaging |
0.48 |
R6010:Vps8
|
UTSW |
16 |
21,363,955 (GRCm39) |
intron |
probably benign |
|
R6023:Vps8
|
UTSW |
16 |
21,279,988 (GRCm39) |
missense |
probably benign |
0.32 |
R6173:Vps8
|
UTSW |
16 |
21,314,682 (GRCm39) |
splice site |
probably null |
|
R6185:Vps8
|
UTSW |
16 |
21,288,891 (GRCm39) |
missense |
probably damaging |
0.98 |
R6264:Vps8
|
UTSW |
16 |
21,378,099 (GRCm39) |
nonsense |
probably null |
|
R6409:Vps8
|
UTSW |
16 |
21,297,189 (GRCm39) |
missense |
probably benign |
0.29 |
R6522:Vps8
|
UTSW |
16 |
21,261,129 (GRCm39) |
missense |
probably damaging |
0.99 |
R6528:Vps8
|
UTSW |
16 |
21,372,875 (GRCm39) |
nonsense |
probably null |
|
R6784:Vps8
|
UTSW |
16 |
21,381,957 (GRCm39) |
missense |
probably benign |
0.01 |
R7040:Vps8
|
UTSW |
16 |
21,393,772 (GRCm39) |
missense |
probably damaging |
1.00 |
R7072:Vps8
|
UTSW |
16 |
21,400,329 (GRCm39) |
missense |
probably benign |
|
R7103:Vps8
|
UTSW |
16 |
21,345,191 (GRCm39) |
missense |
probably damaging |
1.00 |
R7149:Vps8
|
UTSW |
16 |
21,278,526 (GRCm39) |
missense |
probably damaging |
1.00 |
R7195:Vps8
|
UTSW |
16 |
21,275,032 (GRCm39) |
missense |
probably damaging |
1.00 |
R7206:Vps8
|
UTSW |
16 |
21,276,171 (GRCm39) |
missense |
probably damaging |
1.00 |
R7403:Vps8
|
UTSW |
16 |
21,253,722 (GRCm39) |
missense |
possibly damaging |
0.78 |
R7782:Vps8
|
UTSW |
16 |
21,330,308 (GRCm39) |
missense |
possibly damaging |
0.89 |
R7806:Vps8
|
UTSW |
16 |
21,278,501 (GRCm39) |
missense |
probably damaging |
1.00 |
R7846:Vps8
|
UTSW |
16 |
21,351,070 (GRCm39) |
missense |
probably benign |
0.01 |
R7943:Vps8
|
UTSW |
16 |
21,296,622 (GRCm39) |
missense |
possibly damaging |
0.66 |
R8075:Vps8
|
UTSW |
16 |
21,340,644 (GRCm39) |
missense |
probably damaging |
0.99 |
R8190:Vps8
|
UTSW |
16 |
21,393,780 (GRCm39) |
missense |
possibly damaging |
0.73 |
R8307:Vps8
|
UTSW |
16 |
21,314,652 (GRCm39) |
missense |
probably benign |
0.02 |
R8483:Vps8
|
UTSW |
16 |
21,393,763 (GRCm39) |
missense |
probably damaging |
0.98 |
R8814:Vps8
|
UTSW |
16 |
21,395,400 (GRCm39) |
missense |
probably damaging |
1.00 |
R9064:Vps8
|
UTSW |
16 |
21,288,979 (GRCm39) |
missense |
probably damaging |
1.00 |
R9367:Vps8
|
UTSW |
16 |
21,340,668 (GRCm39) |
missense |
possibly damaging |
0.45 |
R9404:Vps8
|
UTSW |
16 |
21,426,927 (GRCm39) |
missense |
probably benign |
0.12 |
R9544:Vps8
|
UTSW |
16 |
21,336,893 (GRCm39) |
missense |
probably benign |
0.00 |
R9570:Vps8
|
UTSW |
16 |
21,462,953 (GRCm39) |
missense |
probably benign |
0.10 |
R9634:Vps8
|
UTSW |
16 |
21,372,893 (GRCm39) |
missense |
probably damaging |
1.00 |
R9702:Vps8
|
UTSW |
16 |
21,462,883 (GRCm39) |
missense |
probably benign |
0.17 |
|
Predicted Primers |
PCR Primer
(F):5'- TGTCCCATTGCCACAGAAGTTACC -3'
(R):5'- ACAGCTTATCAGTGTGCTTCCCG -3'
Sequencing Primer
(F):5'- GCTACTGTGTTAATAGCAGCC -3'
(R):5'- CGTCTGTTCTCATCGAGAATCC -3'
|
Posted On |
2013-05-23 |