Incidental Mutation 'IGL03177:Vmn1r209'
ID 412019
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vmn1r209
Ensembl Gene ENSMUSG00000071491
Gene Name vomeronasal 1 receptor 209
Synonyms Gm11315
Accession Numbers
Essential gene? Probably non essential (E-score: 0.096) question?
Stock # IGL03177
Quality Score
Status
Chromosome 13
Chromosomal Location 22989750-22990688 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 22990024 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Tyrosine to Cysteine at position 222 (Y222C)
Ref Sequence ENSEMBL: ENSMUSP00000153997 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000095961] [ENSMUST00000227038] [ENSMUST00000227265]
AlphaFold Q5NC97
Predicted Effect possibly damaging
Transcript: ENSMUST00000095961
AA Change: Y222C

PolyPhen 2 Score 0.464 (Sensitivity: 0.89; Specificity: 0.90)
SMART Domains Protein: ENSMUSP00000093657
Gene: ENSMUSG00000071491
AA Change: Y222C

DomainStartEndE-ValueType
Pfam:TAS2R 2 294 9.8e-9 PFAM
Pfam:V1R 34 297 3e-36 PFAM
Predicted Effect possibly damaging
Transcript: ENSMUST00000227038
AA Change: Y222C

PolyPhen 2 Score 0.464 (Sensitivity: 0.89; Specificity: 0.90)
Predicted Effect possibly damaging
Transcript: ENSMUST00000227265
AA Change: Y222C

PolyPhen 2 Score 0.464 (Sensitivity: 0.89; Specificity: 0.90)
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 46 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adgrg2 T C X: 159,221,259 (GRCm39) I23T possibly damaging Het
Ank2 C A 3: 126,749,519 (GRCm39) E503D probably damaging Het
Anxa7 T C 14: 20,506,654 (GRCm39) I451V probably benign Het
Capn10 T C 1: 92,862,704 (GRCm39) F37L probably benign Het
Cyp4f13 A G 17: 33,165,888 (GRCm39) I30T possibly damaging Het
Ddx27 A G 2: 166,869,840 (GRCm39) N392D possibly damaging Het
Dhx30 T C 9: 109,917,078 (GRCm39) H479R possibly damaging Het
Dnah5 A G 15: 28,295,545 (GRCm39) Y1426C probably damaging Het
Dnajc2 A G 5: 21,980,079 (GRCm39) probably benign Het
Fbxw8 C A 5: 118,267,045 (GRCm39) probably benign Het
Grik5 G A 7: 24,714,879 (GRCm39) T705I probably damaging Het
H2ac4 T A 13: 23,935,509 (GRCm39) probably benign Het
H2-M3 G T 17: 37,581,207 (GRCm39) V19F possibly damaging Het
Hapln2 C A 3: 87,930,078 (GRCm39) C266F probably damaging Het
Hspbp1 A T 7: 4,667,700 (GRCm39) probably null Het
Jak3 T A 8: 72,135,014 (GRCm39) V549D probably damaging Het
Mark1 A G 1: 184,677,104 (GRCm39) S49P probably damaging Het
Mdfic T C 6: 15,770,450 (GRCm39) V152A probably damaging Het
Mgat4a C A 1: 37,483,968 (GRCm39) V501L probably damaging Het
Mlxip C A 5: 123,584,044 (GRCm39) P536T possibly damaging Het
Mrpl2 A T 17: 46,959,963 (GRCm39) T213S probably damaging Het
Nos1ap C A 1: 170,218,299 (GRCm39) probably null Het
Or4a74 C T 2: 89,439,826 (GRCm39) V207I probably benign Het
Or6c1b T C 10: 129,272,684 (GRCm39) M1T probably null Het
Or8b50 T A 9: 38,517,867 (GRCm39) Y35* probably null Het
P2rx2 T C 5: 110,489,479 (GRCm39) I251V probably damaging Het
Parva T A 7: 112,172,140 (GRCm39) probably benign Het
Phf10 G A 17: 15,166,493 (GRCm39) T459I probably damaging Het
Prg4 T A 1: 150,331,354 (GRCm39) probably benign Het
Pum3 A T 19: 27,367,612 (GRCm39) I639N probably benign Het
Rlf T A 4: 121,005,276 (GRCm39) K1235* probably null Het
Ryr3 T A 2: 112,859,016 (GRCm39) I46F probably benign Het
Sall3 A G 18: 81,016,183 (GRCm39) S582P probably benign Het
Scn3b A C 9: 40,181,338 (GRCm39) Y17S probably benign Het
Senp8 A G 9: 59,644,611 (GRCm39) C169R probably damaging Het
Sgsm1 C T 5: 113,398,859 (GRCm39) A1025T probably damaging Het
Six1 T C 12: 73,090,514 (GRCm39) E217G possibly damaging Het
Slc38a8 T C 8: 120,212,251 (GRCm39) D364G probably damaging Het
Stk10 A T 11: 32,564,592 (GRCm39) E801V probably damaging Het
Ston2 A T 12: 91,614,431 (GRCm39) I659N probably damaging Het
Stxbp4 T C 11: 90,462,579 (GRCm39) Q331R probably benign Het
Synpo2 A T 3: 122,914,864 (GRCm39) V54E probably damaging Het
Tax1bp1 A G 6: 52,713,932 (GRCm39) D237G possibly damaging Het
Tmigd1 T C 11: 76,797,774 (GRCm39) Y39H probably benign Het
Vmn1r15 A G 6: 57,235,458 (GRCm39) T109A probably benign Het
Zfp809 A G 9: 22,146,347 (GRCm39) D12G probably damaging Het
Other mutations in Vmn1r209
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01773:Vmn1r209 APN 13 22,990,450 (GRCm39) missense probably damaging 1.00
IGL01788:Vmn1r209 APN 13 22,989,832 (GRCm39) missense probably damaging 0.97
IGL02738:Vmn1r209 APN 13 22,990,290 (GRCm39) nonsense probably null
IGL03199:Vmn1r209 APN 13 22,990,220 (GRCm39) missense possibly damaging 0.89
R0437:Vmn1r209 UTSW 13 22,990,526 (GRCm39) missense probably benign 0.01
R0497:Vmn1r209 UTSW 13 22,990,118 (GRCm39) missense probably damaging 1.00
R0506:Vmn1r209 UTSW 13 22,990,114 (GRCm39) missense probably damaging 0.98
R1496:Vmn1r209 UTSW 13 22,989,934 (GRCm39) missense probably damaging 1.00
R1644:Vmn1r209 UTSW 13 22,990,652 (GRCm39) missense possibly damaging 0.52
R1829:Vmn1r209 UTSW 13 22,990,409 (GRCm39) missense possibly damaging 0.95
R2360:Vmn1r209 UTSW 13 22,989,836 (GRCm39) missense probably damaging 1.00
R3434:Vmn1r209 UTSW 13 22,990,267 (GRCm39) missense probably benign 0.04
R3435:Vmn1r209 UTSW 13 22,990,267 (GRCm39) missense probably benign 0.04
R4082:Vmn1r209 UTSW 13 22,989,785 (GRCm39) missense probably null 0.15
R4451:Vmn1r209 UTSW 13 22,990,668 (GRCm39) missense probably benign 0.02
R4616:Vmn1r209 UTSW 13 22,990,135 (GRCm39) missense probably damaging 1.00
R4618:Vmn1r209 UTSW 13 22,990,619 (GRCm39) missense possibly damaging 0.87
R4801:Vmn1r209 UTSW 13 22,989,826 (GRCm39) missense probably damaging 1.00
R4802:Vmn1r209 UTSW 13 22,989,826 (GRCm39) missense probably damaging 1.00
R6035:Vmn1r209 UTSW 13 22,990,202 (GRCm39) missense probably benign 0.02
R6035:Vmn1r209 UTSW 13 22,990,202 (GRCm39) missense probably benign 0.02
R6908:Vmn1r209 UTSW 13 22,990,400 (GRCm39) missense possibly damaging 0.60
R7162:Vmn1r209 UTSW 13 22,990,128 (GRCm39) missense probably damaging 1.00
R7772:Vmn1r209 UTSW 13 22,990,664 (GRCm39) missense possibly damaging 0.77
R8328:Vmn1r209 UTSW 13 22,990,643 (GRCm39) missense probably benign 0.00
R8335:Vmn1r209 UTSW 13 22,989,977 (GRCm39) missense probably damaging 1.00
R8903:Vmn1r209 UTSW 13 22,990,684 (GRCm39) missense probably benign 0.00
R8919:Vmn1r209 UTSW 13 22,990,223 (GRCm39) missense probably benign
R8932:Vmn1r209 UTSW 13 22,990,343 (GRCm39) missense probably damaging 1.00
R9307:Vmn1r209 UTSW 13 22,990,072 (GRCm39) missense probably damaging 0.98
R9343:Vmn1r209 UTSW 13 22,990,546 (GRCm39) missense probably damaging 1.00
Posted On 2016-08-02