Incidental Mutation 'IGL03182:Or8k40'
| ID |
412284 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Or8k40
|
| Ensembl Gene |
ENSMUSG00000075172 |
| Gene Name |
olfactory receptor family 8 subfamily K member 40 |
| Synonyms |
MOR188-4, GA_x6K02T2Q125-48247345-48246404, Olfr1090 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.079)
|
| Stock # |
IGL03182
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
2 |
| Chromosomal Location |
86584139-86585080 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to T
at 86584366 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Serine to Threonine
at position 239
(S239T)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000149968
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000099875]
[ENSMUST00000215991]
[ENSMUST00000217043]
|
| AlphaFold |
Q8VGA6 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000099875
AA Change: S239T
PolyPhen 2
Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
|
| SMART Domains |
Protein: ENSMUSP00000097460
Gene: ENSMUSG00000075172
AA Change: S239T
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
307 |
1.4e-47 |
PFAM |
|
Pfam:7tm_1
|
41 |
290 |
7.1e-20 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000215991
AA Change: S239T
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000217043
AA Change: S239T
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 42 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Agbl3 |
A |
T |
6: 34,780,435 (GRCm39) |
K469N |
probably damaging |
Het |
| Aldh2 |
A |
G |
5: 121,718,787 (GRCm39) |
|
probably benign |
Het |
| Ankfy1 |
T |
C |
11: 72,619,580 (GRCm39) |
|
probably benign |
Het |
| Ankhd1 |
C |
T |
18: 36,711,827 (GRCm39) |
T209I |
probably benign |
Het |
| Aox3 |
G |
A |
1: 58,205,046 (GRCm39) |
V754I |
probably benign |
Het |
| Arfgef3 |
C |
T |
10: 18,476,292 (GRCm39) |
R1509H |
probably damaging |
Het |
| Ccdc157 |
A |
G |
11: 4,101,832 (GRCm39) |
S30P |
probably damaging |
Het |
| Cept1 |
T |
A |
3: 106,411,866 (GRCm39) |
E369D |
probably damaging |
Het |
| Clcnka |
T |
C |
4: 141,121,798 (GRCm39) |
Y236C |
probably damaging |
Het |
| Ddx42 |
A |
T |
11: 106,138,353 (GRCm39) |
L717F |
probably benign |
Het |
| Dnah11 |
A |
T |
12: 117,994,026 (GRCm39) |
I2340N |
probably damaging |
Het |
| Dsel |
T |
C |
1: 111,787,868 (GRCm39) |
E889G |
probably damaging |
Het |
| Fasn |
T |
C |
11: 120,703,552 (GRCm39) |
Y1560C |
probably damaging |
Het |
| Fermt2 |
A |
T |
14: 45,699,225 (GRCm39) |
M623K |
possibly damaging |
Het |
| Gm21970 |
T |
A |
16: 91,190,726 (GRCm39) |
S110T |
possibly damaging |
Het |
| Gm826 |
T |
A |
2: 160,169,035 (GRCm39) |
R91S |
unknown |
Het |
| Lrrn3 |
A |
G |
12: 41,504,020 (GRCm39) |
L99S |
probably damaging |
Het |
| Megf8 |
T |
A |
7: 25,046,773 (GRCm39) |
M1552K |
possibly damaging |
Het |
| Mgll |
G |
T |
6: 88,800,173 (GRCm39) |
V191F |
probably damaging |
Het |
| Nkapd1 |
T |
C |
9: 50,523,698 (GRCm39) |
N50S |
possibly damaging |
Het |
| Nol8 |
C |
A |
13: 49,817,557 (GRCm39) |
H778N |
probably damaging |
Het |
| Or1e26 |
T |
A |
11: 73,480,268 (GRCm39) |
T99S |
probably benign |
Het |
| Or5b116 |
A |
C |
19: 13,422,807 (GRCm39) |
T144P |
possibly damaging |
Het |
| Or8g30 |
A |
T |
9: 39,230,277 (GRCm39) |
M211K |
probably benign |
Het |
| Pfkfb3 |
A |
T |
2: 11,506,474 (GRCm39) |
I13N |
probably damaging |
Het |
| Pim1 |
T |
A |
17: 29,710,740 (GRCm39) |
D114E |
possibly damaging |
Het |
| Pkd1 |
T |
C |
17: 24,792,792 (GRCm39) |
L1493P |
probably damaging |
Het |
| Plb1 |
A |
T |
5: 32,502,259 (GRCm39) |
|
probably benign |
Het |
| Plch1 |
A |
T |
3: 63,610,015 (GRCm39) |
Y872* |
probably null |
Het |
| Rictor |
A |
G |
15: 6,819,079 (GRCm39) |
D1434G |
probably benign |
Het |
| Rptor |
G |
A |
11: 119,615,971 (GRCm39) |
G162R |
probably damaging |
Het |
| Serping1 |
T |
C |
2: 84,596,162 (GRCm39) |
D424G |
probably damaging |
Het |
| Slit2 |
A |
G |
5: 48,377,395 (GRCm39) |
I475V |
possibly damaging |
Het |
| Snx31 |
G |
T |
15: 36,525,833 (GRCm39) |
Q289K |
probably benign |
Het |
| Tbc1d13 |
G |
A |
2: 30,037,379 (GRCm39) |
A254T |
probably damaging |
Het |
| Tek |
T |
C |
4: 94,740,002 (GRCm39) |
I750T |
probably damaging |
Het |
| Tet2 |
A |
T |
3: 133,177,159 (GRCm39) |
L1296* |
probably null |
Het |
| Tmem145 |
T |
A |
7: 25,014,304 (GRCm39) |
F459I |
probably damaging |
Het |
| Uba5 |
A |
T |
9: 103,931,328 (GRCm39) |
V247D |
possibly damaging |
Het |
| Vmn1r83 |
T |
C |
7: 12,055,617 (GRCm39) |
M147V |
probably benign |
Het |
| Vwde |
T |
C |
6: 13,187,138 (GRCm39) |
D783G |
probably damaging |
Het |
| Zfp609 |
A |
G |
9: 65,608,287 (GRCm39) |
S1198P |
probably benign |
Het |
|
| Other mutations in Or8k40 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01118:Or8k40
|
APN |
2 |
86,584,314 (GRCm39) |
missense |
probably benign |
0.42 |
|
IGL01343:Or8k40
|
APN |
2 |
86,584,843 (GRCm39) |
nonsense |
probably null |
|
|
IGL01431:Or8k40
|
APN |
2 |
86,584,508 (GRCm39) |
missense |
probably benign |
0.12 |
|
IGL01771:Or8k40
|
APN |
2 |
86,584,626 (GRCm39) |
missense |
probably benign |
0.15 |
|
IGL03229:Or8k40
|
APN |
2 |
86,584,360 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0126:Or8k40
|
UTSW |
2 |
86,584,981 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R0128:Or8k40
|
UTSW |
2 |
86,584,231 (GRCm39) |
missense |
probably benign |
0.39 |
|
R0130:Or8k40
|
UTSW |
2 |
86,584,231 (GRCm39) |
missense |
probably benign |
0.39 |
|
R1383:Or8k40
|
UTSW |
2 |
86,584,838 (GRCm39) |
missense |
possibly damaging |
0.80 |
|
R2100:Or8k40
|
UTSW |
2 |
86,584,905 (GRCm39) |
missense |
possibly damaging |
0.80 |
|
R2125:Or8k40
|
UTSW |
2 |
86,584,796 (GRCm39) |
missense |
probably benign |
0.00 |
|
R2126:Or8k40
|
UTSW |
2 |
86,584,796 (GRCm39) |
missense |
probably benign |
0.00 |
|
R2249:Or8k40
|
UTSW |
2 |
86,584,398 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R3695:Or8k40
|
UTSW |
2 |
86,584,215 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3878:Or8k40
|
UTSW |
2 |
86,584,972 (GRCm39) |
missense |
probably benign |
0.02 |
|
R3940:Or8k40
|
UTSW |
2 |
86,584,275 (GRCm39) |
missense |
possibly damaging |
0.52 |
|
R3944:Or8k40
|
UTSW |
2 |
86,584,525 (GRCm39) |
missense |
probably benign |
0.17 |
|
R3975:Or8k40
|
UTSW |
2 |
86,584,887 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R4387:Or8k40
|
UTSW |
2 |
86,584,464 (GRCm39) |
missense |
probably benign |
0.42 |
|
R4623:Or8k40
|
UTSW |
2 |
86,584,906 (GRCm39) |
missense |
possibly damaging |
0.80 |
|
R4740:Or8k40
|
UTSW |
2 |
86,584,155 (GRCm39) |
missense |
probably benign |
0.00 |
|
R6775:Or8k40
|
UTSW |
2 |
86,584,921 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7002:Or8k40
|
UTSW |
2 |
86,585,025 (GRCm39) |
missense |
probably benign |
0.01 |
|
R7746:Or8k40
|
UTSW |
2 |
86,584,437 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8296:Or8k40
|
UTSW |
2 |
86,584,893 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9038:Or8k40
|
UTSW |
2 |
86,584,354 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9243:Or8k40
|
UTSW |
2 |
86,584,282 (GRCm39) |
missense |
possibly damaging |
0.78 |
|
| Posted On |
2016-08-02 |
Incidental Mutation