Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL03184:Brms1l'

412374

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Brms1l

Ensembl Gene

ENSMUSG00000012076

Gene Name

breast cancer metastasis-suppressor 1-like

Synonyms

0710008O11Rik, D12Ertd407e, BRMS1

Accession Numbers

Essential gene?

Probably essential (E-score: 0.940) question?

Stock #

IGL03184

Quality Score

Status

Chromosome

Chromosomal Location

55883109-55916521 bp(+) (GRCm39)

Type of Mutation

makesense

DNA Base Change (assembly)

T to C at 55915062 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Stop codon to Glutamine at position 324 (*324Q)

Ref Sequence

ENSEMBL: ENSMUSP00000082500 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000059250] [ENSMUST00000219419]

AlphaFold

Q3U1T3

Predicted Effect

probably null
Transcript: ENSMUST00000059250
AA Change: *324Q

SMART Domains

Protein: ENSMUSP00000082500
Gene: ENSMUSG00000012076
AA Change: *324Q

Domain	Start	End	E-Value	Type
low complexity region	24	55	N/A	INTRINSIC
Pfam:Sds3	61	217	1.5e-27	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000219419

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000219575

Coding Region Coverage

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene shows sequence similarity to the human breast carcinoma metastasis suppressor (BRMS1) protein and the mammalian Sds3 (suppressor of defective silencing 3) proteins. This protein is a component of the mSin3a family of histone deacetylase complexes (HDAC). [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 54 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2210408I21Rik	T	C	13: 77,471,570 (GRCm39)	Y992H	possibly damaging	Het
Actmap	A	G	7: 26,896,432 (GRCm39)		probably benign	Het
Adcy7	T	A	8: 89,035,271 (GRCm39)	D58E	probably benign	Het
Aff2	G	A	X: 68,810,840 (GRCm39)	V404M	possibly damaging	Het
Ankhd1	T	A	18: 36,780,830 (GRCm39)	L1961M	probably damaging	Het
Bub1b	T	C	2: 118,440,258 (GRCm39)		probably benign	Het
Cacna1b	A	G	2: 24,548,501 (GRCm39)		probably null	Het
Clrn1	T	A	3: 58,753,645 (GRCm39)	T239S	probably benign	Het
Clta	T	C	4: 44,025,514 (GRCm39)	Y145H	probably benign	Het
Coro6	T	C	11: 77,354,779 (GRCm39)	V14A	probably damaging	Het
Cyp4a30b	A	G	4: 115,316,216 (GRCm39)	D314G	probably damaging	Het
Fn1	T	C	1: 71,648,656 (GRCm39)	N1418D	probably benign	Het
Fshr	A	C	17: 89,354,068 (GRCm39)	L97V	possibly damaging	Het
Gcm2	T	C	13: 41,258,888 (GRCm39)	Q152R	probably damaging	Het
Gcnt2	A	G	13: 41,041,660 (GRCm39)	N273S	probably benign	Het
Gm11437	A	T	11: 84,047,090 (GRCm39)		probably benign	Het
Gm4559	A	G	7: 141,828,046 (GRCm39)	S19P	unknown	Het
Igsf8	T	G	1: 172,146,199 (GRCm39)	I462R	probably damaging	Het
Kirrel3	T	C	9: 34,919,052 (GRCm39)	F243S	probably damaging	Het
Krt80	C	T	15: 101,250,135 (GRCm39)	V37M	probably damaging	Het
Lama4	T	C	10: 38,954,839 (GRCm39)	Y1131H	probably damaging	Het
Mrpl21	T	C	19: 3,342,529 (GRCm39)		probably benign	Het
Mtcl1	T	C	17: 66,661,209 (GRCm39)	N923S	probably benign	Het
Nectin2	G	A	7: 19,472,231 (GRCm39)	P53S	possibly damaging	Het
Nup98	G	A	7: 101,832,752 (GRCm39)	T335I	probably damaging	Het
Or2y1e	C	A	11: 49,218,568 (GRCm39)	T110K	probably damaging	Het
Or4a74	T	C	2: 89,439,912 (GRCm39)	D178G	probably damaging	Het
Or4e5	A	G	14: 52,728,380 (GRCm39)	S14P	probably benign	Het
Or51a42	T	A	7: 103,708,054 (GRCm39)	I252F	probably damaging	Het
Or6c69c	T	C	10: 129,910,627 (GRCm39)	M116T	possibly damaging	Het
Pcdhb14	A	G	18: 37,582,085 (GRCm39)	E397G	probably benign	Het
Pcgf5	T	G	19: 36,412,076 (GRCm39)		probably benign	Het
Pclo	C	T	5: 14,764,457 (GRCm39)	P1025L	probably damaging	Het
Pdcd1lg2	C	A	19: 29,431,911 (GRCm39)	F226L	probably benign	Het
Pik3ca	T	A	3: 32,494,035 (GRCm39)	S332R	probably benign	Het
Plek	A	T	11: 16,931,887 (GRCm39)	D321E	probably benign	Het
Pm20d2	A	G	4: 33,179,241 (GRCm39)	F333L	probably damaging	Het
Polk	T	C	13: 96,620,491 (GRCm39)	T570A	probably benign	Het
Rpgrip1l	G	A	8: 92,027,437 (GRCm39)	L201F	probably damaging	Het
Serpinb2	T	A	1: 107,452,607 (GRCm39)	L395H	probably damaging	Het
Slc9c1	T	G	16: 45,368,003 (GRCm39)	S197R	probably damaging	Het
Smg1	T	A	7: 117,779,603 (GRCm39)	E1264V	possibly damaging	Het
Sned1	A	G	1: 93,202,390 (GRCm39)	D678G	probably benign	Het
Sorcs2	A	G	5: 36,188,556 (GRCm39)	S851P	probably benign	Het
Srcap	A	G	7: 127,129,674 (GRCm39)		probably benign	Het
Tbck	T	C	3: 132,441,864 (GRCm39)	Y557H	probably damaging	Het
Tfap2d	T	C	1: 19,189,110 (GRCm39)	S219P	probably damaging	Het
Trim9	T	C	12: 70,297,995 (GRCm39)	D570G	probably damaging	Het
Usp25	A	G	16: 76,878,541 (GRCm39)	Y655C	probably damaging	Het
Utrn	T	A	10: 12,585,910 (GRCm39)	T956S	probably benign	Het
Vmn1r68	T	A	7: 10,261,799 (GRCm39)	I100F	probably benign	Het
Vps13a	A	T	19: 16,631,734 (GRCm39)	S2634T	probably benign	Het
Zfp472	T	A	17: 33,196,390 (GRCm39)	L155*	probably null	Het
Zfp808	A	G	13: 62,317,381 (GRCm39)	I43M	possibly damaging	Het

Other mutations in Brms1l

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00922:Brms1l	APN	12	55,892,111 (GRCm39)	missense	probably benign	0.15
IGL00951:Brms1l	APN	12	55,912,834 (GRCm39)	missense	possibly damaging	0.54
IGL02199:Brms1l	APN	12	55,907,957 (GRCm39)	critical splice donor site	probably benign
IGL02669:Brms1l	APN	12	55,888,401 (GRCm39)	missense	probably damaging	1.00
IGL03158:Brms1l	APN	12	55,883,320 (GRCm39)	missense	possibly damaging	0.83
R0445:Brms1l	UTSW	12	55,908,191 (GRCm39)	nonsense	probably null
R0568:Brms1l	UTSW	12	55,908,173 (GRCm39)	critical splice acceptor site	probably null
R0942:Brms1l	UTSW	12	55,912,742 (GRCm39)	missense	probably benign	0.00
R0968:Brms1l	UTSW	12	55,912,798 (GRCm39)	missense	possibly damaging	0.73
R1240:Brms1l	UTSW	12	55,891,293 (GRCm39)	missense	probably damaging	1.00
R1580:Brms1l	UTSW	12	55,915,007 (GRCm39)	missense	probably damaging	1.00
R1694:Brms1l	UTSW	12	55,888,385 (GRCm39)	missense	probably damaging	1.00
R1926:Brms1l	UTSW	12	55,909,946 (GRCm39)	missense	possibly damaging	0.69
R4626:Brms1l	UTSW	12	55,909,958 (GRCm39)	missense	probably benign	0.01
R4669:Brms1l	UTSW	12	55,888,356 (GRCm39)	missense	possibly damaging	0.83
R4987:Brms1l	UTSW	12	55,912,800 (GRCm39)	missense	probably benign	0.15
R6010:Brms1l	UTSW	12	55,914,985 (GRCm39)	missense	possibly damaging	0.55
R6129:Brms1l	UTSW	12	55,914,970 (GRCm39)	missense	probably benign	0.03
R7429:Brms1l	UTSW	12	55,892,084 (GRCm39)	missense	probably damaging	1.00
R7430:Brms1l	UTSW	12	55,892,084 (GRCm39)	missense	probably damaging	1.00
R7510:Brms1l	UTSW	12	55,892,107 (GRCm39)	nonsense	probably null
R7543:Brms1l	UTSW	12	55,914,997 (GRCm39)	missense	probably damaging	1.00
R7855:Brms1l	UTSW	12	55,912,838 (GRCm39)	missense	possibly damaging	0.90
R8200:Brms1l	UTSW	12	55,891,183 (GRCm39)	missense	probably damaging	1.00
R8376:Brms1l	UTSW	12	55,888,414 (GRCm39)	missense	probably benign	0.03
R8532:Brms1l	UTSW	12	55,891,264 (GRCm39)	missense	probably damaging	1.00
R9131:Brms1l	UTSW	12	55,906,913 (GRCm39)	missense	possibly damaging	0.93
R9335:Brms1l	UTSW	12	55,888,431 (GRCm39)	missense	possibly damaging	0.96
R9433:Brms1l	UTSW	12	55,912,863 (GRCm39)	critical splice donor site	probably null
R9577:Brms1l	UTSW	12	55,906,876 (GRCm39)	missense	probably damaging	1.00

Posted On

2016-08-02