Incidental Mutation 'IGL03191:Dpf1'
ID 412665
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Dpf1
Ensembl Gene ENSMUSG00000030584
Gene Name double PHD fingers 1
Synonyms neuro-d4, Neud4
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # IGL03191
Quality Score
Status
Chromosome 7
Chromosomal Location 29003366-29017017 bp(+) (GRCm39)
Type of Mutation unclassified
DNA Base Change (assembly) T to A at 29015986 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Gene Model predicted gene model for transcript(s): [ENSMUST00000049977] [ENSMUST00000065181] [ENSMUST00000085809] [ENSMUST00000108230] [ENSMUST00000108231] [ENSMUST00000183096]
AlphaFold Q9QX66
Predicted Effect probably benign
Transcript: ENSMUST00000049977
SMART Domains Protein: ENSMUSP00000054385
Gene: ENSMUSG00000030584

DomainStartEndE-ValueType
Pfam:Requiem_N 12 85 1.6e-39 PFAM
ZnF_C2H2 196 219 2.4e-3 SMART
PHD 274 327 8.98e-7 SMART
RING 275 326 1.06e1 SMART
PHD 328 374 2.6e-12 SMART
RING 329 373 8.53e-1 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000065181
SMART Domains Protein: ENSMUSP00000070539
Gene: ENSMUSG00000030584

DomainStartEndE-ValueType
Pfam:Requiem_N 11 84 2e-39 PFAM
ZnF_C2H2 195 218 2.4e-3 SMART
PHD 273 326 8.98e-7 SMART
RING 274 325 1.06e1 SMART
PHD 327 373 2.6e-12 SMART
RING 328 372 8.53e-1 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000085809
SMART Domains Protein: ENSMUSP00000082965
Gene: ENSMUSG00000030583

DomainStartEndE-ValueType
low complexity region 54 69 N/A INTRINSIC
low complexity region 361 380 N/A INTRINSIC
low complexity region 407 419 N/A INTRINSIC
Pfam:Rap_GAP 634 816 1.7e-68 PFAM
PDZ 969 1035 1.39e-8 SMART
low complexity region 1053 1064 N/A INTRINSIC
low complexity region 1190 1201 N/A INTRINSIC
low complexity region 1260 1277 N/A INTRINSIC
low complexity region 1283 1294 N/A INTRINSIC
Pfam:SPAR_C 1471 1721 1.6e-96 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000108230
SMART Domains Protein: ENSMUSP00000103865
Gene: ENSMUSG00000030584

DomainStartEndE-ValueType
Pfam:Requiem_N 11 84 9.7e-40 PFAM
PHD 229 282 8.98e-7 SMART
RING 230 281 1.06e1 SMART
PHD 283 339 6.85e-12 SMART
RING 284 338 9.5e-1 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000108231
SMART Domains Protein: ENSMUSP00000103866
Gene: ENSMUSG00000030584

DomainStartEndE-ValueType
Pfam:Requiem_N 13 84 1.2e-39 PFAM
ZnF_C2H2 196 219 2.4e-3 SMART
PHD 274 327 8.98e-7 SMART
RING 275 326 1.06e1 SMART
PHD 328 384 6.85e-12 SMART
RING 329 383 9.5e-1 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000126169
Predicted Effect noncoding transcript
Transcript: ENSMUST00000128145
Predicted Effect noncoding transcript
Transcript: ENSMUST00000154222
Predicted Effect noncoding transcript
Transcript: ENSMUST00000207677
Predicted Effect noncoding transcript
Transcript: ENSMUST00000182009
Predicted Effect noncoding transcript
Transcript: ENSMUST00000182223
Predicted Effect noncoding transcript
Transcript: ENSMUST00000207245
Predicted Effect noncoding transcript
Transcript: ENSMUST00000138993
Predicted Effect probably benign
Transcript: ENSMUST00000183330
Predicted Effect probably benign
Transcript: ENSMUST00000142958
SMART Domains Protein: ENSMUSP00000117186
Gene: ENSMUSG00000030584

DomainStartEndE-ValueType
ZnF_C2H2 21 44 2.4e-3 SMART
PHD 82 135 8.98e-7 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000183096
SMART Domains Protein: ENSMUSP00000138171
Gene: ENSMUSG00000030583

DomainStartEndE-ValueType
low complexity region 54 69 N/A INTRINSIC
low complexity region 361 380 N/A INTRINSIC
low complexity region 407 419 N/A INTRINSIC
Pfam:Rap_GAP 634 822 6.7e-64 PFAM
PDZ 969 1035 1.39e-8 SMART
low complexity region 1053 1064 N/A INTRINSIC
low complexity region 1190 1201 N/A INTRINSIC
low complexity region 1260 1277 N/A INTRINSIC
low complexity region 1283 1294 N/A INTRINSIC
Pfam:DUF3401 1471 1721 7.2e-94 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000137848
SMART Domains Protein: ENSMUSP00000120956
Gene: ENSMUSG00000030584

DomainStartEndE-ValueType
Pfam:Requiem_N 1 40 8.9e-20 PFAM
ZnF_C2H2 122 143 5.34e-1 SMART
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 28 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Aox1 A G 1: 58,398,228 (GRCm39) D1323G probably null Het
Asxl2 A G 12: 3,550,094 (GRCm39) D612G probably damaging Het
Cacna1c A T 6: 118,718,864 (GRCm39) F395L probably damaging Het
Cct8 A G 16: 87,283,198 (GRCm39) S380P probably damaging Het
Cltb T C 13: 54,746,883 (GRCm39) E31G probably damaging Het
Cobl T C 11: 12,203,364 (GRCm39) M1031V probably benign Het
Colgalt1 C A 8: 72,075,731 (GRCm39) probably null Het
Dcstamp A G 15: 39,617,620 (GRCm39) I10V probably benign Het
Diaph3 T C 14: 87,310,738 (GRCm39) I138V possibly damaging Het
Dnah8 T C 17: 30,945,804 (GRCm39) V1827A probably damaging Het
Dscam A T 16: 96,621,969 (GRCm39) L494Q probably benign Het
Eif2ak4 C T 2: 118,252,693 (GRCm39) H422Y probably damaging Het
Galnt10 T C 11: 57,662,326 (GRCm39) V324A probably damaging Het
Hcfc1 T C X: 72,999,220 (GRCm39) I309V probably benign Het
Il24 T C 1: 130,812,584 (GRCm39) T96A probably benign Het
Itga2 T C 13: 114,973,020 (GRCm39) probably benign Het
Lrrc32 A G 7: 98,147,454 (GRCm39) H78R possibly damaging Het
Lrrk1 T C 7: 65,909,707 (GRCm39) E2001G probably damaging Het
Lztr1 T A 16: 17,336,392 (GRCm39) M199K probably damaging Het
Mcm8 A G 2: 132,663,362 (GRCm39) Y160C possibly damaging Het
Msh4 G A 3: 153,575,245 (GRCm39) T710M probably damaging Het
Pate8 T C 9: 36,492,698 (GRCm39) D69G probably benign Het
Pilrb1 A T 5: 137,853,227 (GRCm39) L192Q probably damaging Het
Pim1 T A 17: 29,712,693 (GRCm39) probably benign Het
Slc12a1 A T 2: 125,048,009 (GRCm39) Q817L possibly damaging Het
Trip11 T C 12: 101,865,184 (GRCm39) D163G probably damaging Het
Tsc2 A T 17: 24,847,028 (GRCm39) V179E probably damaging Het
Zfp641 C T 15: 98,186,568 (GRCm39) V352M probably damaging Het
Other mutations in Dpf1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00478:Dpf1 APN 7 29,015,981 (GRCm39) unclassified probably benign
IGL00736:Dpf1 APN 7 29,012,333 (GRCm39) nonsense probably null
IGL01804:Dpf1 APN 7 29,015,926 (GRCm39) missense probably damaging 1.00
IGL01942:Dpf1 APN 7 29,015,927 (GRCm39) missense probably damaging 1.00
IGL01953:Dpf1 APN 7 29,013,732 (GRCm39) missense probably damaging 1.00
R3622:Dpf1 UTSW 7 29,015,631 (GRCm39) splice site probably null
R3924:Dpf1 UTSW 7 29,011,098 (GRCm39) missense possibly damaging 0.76
R4234:Dpf1 UTSW 7 29,015,057 (GRCm39) missense probably damaging 1.00
R4606:Dpf1 UTSW 7 29,016,015 (GRCm39) unclassified probably benign
R5379:Dpf1 UTSW 7 29,003,533 (GRCm39) missense probably benign 0.02
R5434:Dpf1 UTSW 7 29,010,756 (GRCm39) missense possibly damaging 0.92
R6185:Dpf1 UTSW 7 29,010,696 (GRCm39) missense possibly damaging 0.92
R6672:Dpf1 UTSW 7 29,015,693 (GRCm39) missense probably damaging 1.00
R6816:Dpf1 UTSW 7 29,011,087 (GRCm39) missense possibly damaging 0.61
R7240:Dpf1 UTSW 7 29,011,052 (GRCm39) missense probably benign 0.01
R7699:Dpf1 UTSW 7 29,011,032 (GRCm39) missense possibly damaging 0.69
R7796:Dpf1 UTSW 7 29,011,106 (GRCm39) missense possibly damaging 0.69
R8071:Dpf1 UTSW 7 29,013,566 (GRCm39) missense probably benign 0.08
R8929:Dpf1 UTSW 7 29,009,174 (GRCm39) missense probably benign 0.39
R9619:Dpf1 UTSW 7 29,012,618 (GRCm39) missense probably benign 0.11
R9643:Dpf1 UTSW 7 29,013,742 (GRCm39) missense probably damaging 0.96
R9668:Dpf1 UTSW 7 29,009,084 (GRCm39) nonsense probably null
Posted On 2016-08-02