Incidental Mutation 'IGL03193:Slc9a2'
ID412695
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Slc9a2
Ensembl Gene ENSMUSG00000026062
Gene Namesolute carrier family 9 (sodium/hydrogen exchanger), member 2
Synonyms2210416H12Rik, 4932415O19Rik, NHE2
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.065) question?
Stock #IGL03193
Quality Score
Status
Chromosome1
Chromosomal Location40680574-40769273 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) G to T at 40756271 bp
ZygosityHeterozygous
Amino Acid Change Valine to Leucine at position 511 (V511L)
Ref Sequence ENSEMBL: ENSMUSP00000027231 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000027231]
Predicted Effect probably benign
Transcript: ENSMUST00000027231
AA Change: V511L

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
SMART Domains Protein: ENSMUSP00000027231
Gene: ENSMUSG00000026062
AA Change: V511L

DomainStartEndE-ValueType
signal peptide 1 34 N/A INTRINSIC
low complexity region 40 60 N/A INTRINSIC
Pfam:Na_H_Exchanger 85 486 1.4e-95 PFAM
low complexity region 528 543 N/A INTRINSIC
Pfam:NEXCaM_BD 576 685 3e-44 PFAM
low complexity region 738 753 N/A INTRINSIC
low complexity region 788 793 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000192294
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the sodium-hydrogen exchanger (NHE) protein family. These proteins are involved in sodium-ion transport by exchanging intracellular hydrogen ions to external sodium ions and help in the regulation of cell pH and volume. The encoded protein is localized to the apical membrane and is involved in apical absorption of sodium. [provided by RefSeq, Jun 2016]
PHENOTYPE: Gastric acid secretion is impaired in homozygous mutant mice. The gastric mucosa becomes inflamed and exhibits an altered cellular composition. Mutant mice do not breed well. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 32 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
A530053G22Rik T C 6: 60,402,152 noncoding transcript Het
Arhgef12 T C 9: 42,992,533 probably benign Het
Bmper C A 9: 23,366,248 H211Q possibly damaging Het
C130074G19Rik A T 1: 184,882,702 L97Q probably damaging Het
Csmd3 A T 15: 47,629,230 probably benign Het
Cyb561a3 T C 19: 10,582,400 Y30H probably benign Het
Cyp2a22 T A 7: 26,936,421 D239V probably benign Het
Fras1 A T 5: 96,778,106 Y3723F probably damaging Het
Frem1 C T 4: 82,994,026 probably benign Het
Gm364 A G X: 57,418,143 probably benign Het
Gm382 G A X: 127,063,698 A1169T probably damaging Het
Golga2 T C 2: 32,305,008 L696P probably damaging Het
Gse1 G T 8: 120,571,340 probably null Het
Herc1 T C 9: 66,402,680 L1104P probably benign Het
Myh14 A G 7: 44,629,945 V945A possibly damaging Het
Myo7a A G 7: 98,091,057 F577L probably damaging Het
Ndst2 A T 14: 20,729,849 S108T probably damaging Het
Nelfcd G A 2: 174,426,832 A559T possibly damaging Het
Neo1 T C 9: 58,908,484 Y836C probably damaging Het
Nlrp4e T C 7: 23,320,826 L246P probably damaging Het
Olfr666 A G 7: 104,893,056 C191R probably benign Het
Osbpl9 A G 4: 109,066,966 S471P possibly damaging Het
Patl1 T A 19: 11,920,840 D127E possibly damaging Het
Pla2g6 G A 15: 79,317,785 P62L probably damaging Het
Prlr T A 15: 10,328,290 S284T possibly damaging Het
Prps2 A T X: 167,374,084 N75K possibly damaging Het
Sec16b A T 1: 157,535,393 M265L probably benign Het
Tnp1 G A 1: 73,015,764 R34W probably damaging Het
Tpr A G 1: 150,440,080 D2036G possibly damaging Het
Trpm6 T C 19: 18,825,872 V893A possibly damaging Het
Tshb T C 3: 102,778,199 Y38C probably damaging Het
Usp17lb A T 7: 104,841,277 S148T possibly damaging Het
Other mutations in Slc9a2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00229:Slc9a2 APN 1 40767737 missense probably benign
IGL00487:Slc9a2 APN 1 40742658 missense probably damaging 0.99
IGL00500:Slc9a2 APN 1 40763583 missense possibly damaging 0.95
IGL01445:Slc9a2 APN 1 40718810 missense possibly damaging 0.51
IGL02060:Slc9a2 APN 1 40756293 missense probably damaging 0.99
IGL02813:Slc9a2 APN 1 40742669 missense probably damaging 1.00
IGL02894:Slc9a2 APN 1 40763602 missense probably benign 0.20
IGL02939:Slc9a2 APN 1 40742703 missense probably damaging 1.00
E0370:Slc9a2 UTSW 1 40763541 critical splice acceptor site probably null
PIT4377001:Slc9a2 UTSW 1 40743841 missense probably damaging 1.00
R0009:Slc9a2 UTSW 1 40763602 missense probably benign 0.38
R0009:Slc9a2 UTSW 1 40763602 missense probably benign 0.38
R0152:Slc9a2 UTSW 1 40742804 missense probably damaging 1.00
R0374:Slc9a2 UTSW 1 40743857 missense possibly damaging 0.93
R1386:Slc9a2 UTSW 1 40719018 missense probably damaging 1.00
R1485:Slc9a2 UTSW 1 40726388 missense probably damaging 1.00
R1712:Slc9a2 UTSW 1 40763610 missense possibly damaging 0.90
R1779:Slc9a2 UTSW 1 40742643 missense probably damaging 0.99
R2051:Slc9a2 UTSW 1 40726437 missense probably damaging 1.00
R2166:Slc9a2 UTSW 1 40742768 missense probably damaging 1.00
R2513:Slc9a2 UTSW 1 40742608 splice site probably null
R3612:Slc9a2 UTSW 1 40719058 splice site probably null
R4631:Slc9a2 UTSW 1 40761918 missense possibly damaging 0.66
R4760:Slc9a2 UTSW 1 40761916 missense probably damaging 1.00
R4768:Slc9a2 UTSW 1 40726374 missense probably damaging 1.00
R4769:Slc9a2 UTSW 1 40726374 missense probably damaging 1.00
R4815:Slc9a2 UTSW 1 40718849 missense probably benign 0.00
R4920:Slc9a2 UTSW 1 40755718 missense probably benign 0.05
R5191:Slc9a2 UTSW 1 40743893 missense probably damaging 1.00
R5963:Slc9a2 UTSW 1 40682036 missense possibly damaging 0.94
R6322:Slc9a2 UTSW 1 40742653 nonsense probably null
R6453:Slc9a2 UTSW 1 40742621 missense possibly damaging 0.64
R6685:Slc9a2 UTSW 1 40718909 missense probably damaging 0.99
R7088:Slc9a2 UTSW 1 40726379 missense probably damaging 1.00
R7302:Slc9a2 UTSW 1 40767668 missense possibly damaging 0.58
R7450:Slc9a2 UTSW 1 40681835 start gained probably benign
X0054:Slc9a2 UTSW 1 40742687 missense probably damaging 0.99
Posted On2016-08-02