Incidental Mutation 'IGL03235:Or4b1d'
| ID |
414022 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Or4b1d
|
| Ensembl Gene |
ENSMUSG00000075066 |
| Gene Name |
olfactory receptor family 4 subfamily B member 1D |
| Synonyms |
Olfr32, MOR227-9_p, MOR227-7P, MTPCR05, GA_x6K02T2Q125-51573576-51572650 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.074)
|
| Stock # |
IGL03235
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
2 |
| Chromosomal Location |
89966617-89972640 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to T
at 89969414 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Valine to Glutamic Acid
at position 23
(V23E)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000150370
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000099755]
[ENSMUST00000213293]
[ENSMUST00000214973]
[ENSMUST00000215153]
[ENSMUST00000215659]
[ENSMUST00000215765]
|
| AlphaFold |
Q7TQZ0 |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000099755
AA Change: V23E
PolyPhen 2
Score 0.807 (Sensitivity: 0.84; Specificity: 0.93)
|
| SMART Domains |
Protein: ENSMUSP00000097344
Gene: ENSMUSG00000075066
AA Change: V23E
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
28 |
302 |
1.7e-52 |
PFAM |
|
Pfam:7tm_1
|
38 |
284 |
6.8e-21 |
PFAM |
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000213293
AA Change: V23E
PolyPhen 2
Score 0.879 (Sensitivity: 0.82; Specificity: 0.94)
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000214973
AA Change: V23E
PolyPhen 2
Score 0.879 (Sensitivity: 0.82; Specificity: 0.94)
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000215153
AA Change: V23E
PolyPhen 2
Score 0.807 (Sensitivity: 0.84; Specificity: 0.93)
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000215659
AA Change: V23E
PolyPhen 2
Score 0.575 (Sensitivity: 0.88; Specificity: 0.91)
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000215765
AA Change: V23E
PolyPhen 2
Score 0.807 (Sensitivity: 0.84; Specificity: 0.93)
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 24 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Ap2b1 |
A |
G |
11: 83,232,210 (GRCm39) |
N461S |
probably benign |
Het |
| Baz1a |
A |
T |
12: 54,945,320 (GRCm39) |
V1345E |
probably damaging |
Het |
| Ccdc60 |
T |
A |
5: 116,269,205 (GRCm39) |
M472L |
probably benign |
Het |
| Cenpf |
C |
T |
1: 189,416,124 (GRCm39) |
R67K |
probably damaging |
Het |
| Cfap45 |
A |
T |
1: 172,366,060 (GRCm39) |
R304S |
possibly damaging |
Het |
| D5Ertd579e |
T |
A |
5: 36,776,172 (GRCm39) |
|
probably benign |
Het |
| Eefsec |
T |
C |
6: 88,353,357 (GRCm39) |
D104G |
probably damaging |
Het |
| Eif2ak4 |
A |
G |
2: 118,273,621 (GRCm39) |
S849G |
probably damaging |
Het |
| Frem1 |
G |
A |
4: 82,938,992 (GRCm39) |
T30I |
possibly damaging |
Het |
| Glt28d2 |
A |
T |
3: 85,779,109 (GRCm39) |
H121Q |
possibly damaging |
Het |
| Hacl1 |
C |
T |
14: 31,352,995 (GRCm39) |
W106* |
probably null |
Het |
| Marchf6 |
A |
G |
15: 31,486,141 (GRCm39) |
S376P |
probably damaging |
Het |
| Mkrn1 |
T |
C |
6: 39,378,264 (GRCm39) |
Y289C |
probably damaging |
Het |
| Msl2 |
A |
G |
9: 100,977,967 (GRCm39) |
T114A |
probably benign |
Het |
| Ntrk3 |
C |
A |
7: 77,842,340 (GRCm39) |
K829N |
probably damaging |
Het |
| Pcdhgc5 |
A |
T |
18: 37,953,151 (GRCm39) |
I142F |
probably damaging |
Het |
| Pip5kl1 |
A |
G |
2: 32,468,166 (GRCm39) |
R153G |
probably damaging |
Het |
| Rgs19 |
T |
C |
2: 181,331,525 (GRCm39) |
K93R |
probably benign |
Het |
| Slc36a4 |
T |
A |
9: 15,634,845 (GRCm39) |
V129E |
probably damaging |
Het |
| Spata13 |
T |
C |
14: 60,989,241 (GRCm39) |
L299P |
probably damaging |
Het |
| Tle2 |
T |
C |
10: 81,422,085 (GRCm39) |
S353P |
probably benign |
Het |
| Trav13d-4 |
T |
C |
14: 53,995,298 (GRCm39) |
V84A |
probably benign |
Het |
| Vmn1r8 |
A |
T |
6: 57,013,746 (GRCm39) |
K266* |
probably null |
Het |
| Wwtr1 |
C |
A |
3: 57,384,954 (GRCm39) |
V255F |
probably benign |
Het |
|
| Other mutations in Or4b1d |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01328:Or4b1d
|
APN |
2 |
89,969,418 (GRCm39) |
missense |
probably benign |
0.30 |
|
IGL01976:Or4b1d
|
APN |
2 |
89,969,268 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02076:Or4b1d
|
APN |
2 |
89,969,159 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03030:Or4b1d
|
APN |
2 |
89,969,006 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
IGL03410:Or4b1d
|
APN |
2 |
89,969,489 (GRCm39) |
start gained |
probably benign |
|
|
R1240:Or4b1d
|
UTSW |
2 |
89,969,157 (GRCm39) |
missense |
possibly damaging |
0.48 |
|
R1511:Or4b1d
|
UTSW |
2 |
89,968,748 (GRCm39) |
missense |
probably benign |
0.13 |
|
R1602:Or4b1d
|
UTSW |
2 |
89,969,399 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1828:Or4b1d
|
UTSW |
2 |
89,968,931 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R2023:Or4b1d
|
UTSW |
2 |
89,969,200 (GRCm39) |
nonsense |
probably null |
|
|
R2177:Or4b1d
|
UTSW |
2 |
89,968,808 (GRCm39) |
missense |
possibly damaging |
0.70 |
|
R2679:Or4b1d
|
UTSW |
2 |
89,968,889 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R4490:Or4b1d
|
UTSW |
2 |
89,969,261 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R4585:Or4b1d
|
UTSW |
2 |
89,968,558 (GRCm39) |
missense |
probably benign |
0.01 |
|
R4586:Or4b1d
|
UTSW |
2 |
89,968,558 (GRCm39) |
missense |
probably benign |
0.01 |
|
R4649:Or4b1d
|
UTSW |
2 |
89,969,432 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R4688:Or4b1d
|
UTSW |
2 |
89,969,343 (GRCm39) |
missense |
possibly damaging |
0.80 |
|
R4694:Or4b1d
|
UTSW |
2 |
89,968,593 (GRCm39) |
nonsense |
probably null |
|
|
R5245:Or4b1d
|
UTSW |
2 |
89,968,606 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5509:Or4b1d
|
UTSW |
2 |
89,969,236 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5991:Or4b1d
|
UTSW |
2 |
89,968,578 (GRCm39) |
nonsense |
probably null |
|
|
R6004:Or4b1d
|
UTSW |
2 |
89,969,343 (GRCm39) |
missense |
probably benign |
0.32 |
|
R6128:Or4b1d
|
UTSW |
2 |
89,968,954 (GRCm39) |
nonsense |
probably null |
|
|
R6519:Or4b1d
|
UTSW |
2 |
89,969,156 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
R7472:Or4b1d
|
UTSW |
2 |
89,968,668 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7892:Or4b1d
|
UTSW |
2 |
89,968,836 (GRCm39) |
missense |
probably benign |
0.00 |
|
R8017:Or4b1d
|
UTSW |
2 |
89,969,170 (GRCm39) |
missense |
probably benign |
0.02 |
|
R8046:Or4b1d
|
UTSW |
2 |
89,969,159 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8464:Or4b1d
|
UTSW |
2 |
89,968,947 (GRCm39) |
missense |
possibly damaging |
0.67 |
|
R8712:Or4b1d
|
UTSW |
2 |
89,969,114 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8998:Or4b1d
|
UTSW |
2 |
89,969,472 (GRCm39) |
missense |
probably benign |
|
|
R9789:Or4b1d
|
UTSW |
2 |
89,969,004 (GRCm39) |
missense |
probably benign |
0.23 |
|
X0066:Or4b1d
|
UTSW |
2 |
89,968,734 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Posted On |
2016-08-02 |
Incidental Mutation