Incidental Mutation 'R0463:Patj'
ID |
41469 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Patj
|
Ensembl Gene |
ENSMUSG00000061859 |
Gene Name |
PATJ, crumbs cell polarity complex component |
Synonyms |
Cipp, Inadl |
MMRRC Submission |
038663-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R0463 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
4 |
Chromosomal Location |
98284022-98607840 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
G to A
at 98562545 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Glutamic Acid to Lysine
at position 1505
(E1505K)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000102649
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000030290]
[ENSMUST00000041284]
[ENSMUST00000102792]
[ENSMUST00000107029]
[ENSMUST00000107034]
|
AlphaFold |
Q63ZW7 |
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000030290
AA Change: E339K
PolyPhen 2
Score 0.888 (Sensitivity: 0.82; Specificity: 0.94)
|
SMART Domains |
Protein: ENSMUSP00000030290 Gene: ENSMUSG00000061859 AA Change: E339K
Domain | Start | End | E-Value | Type |
PDZ
|
31 |
106 |
6.12e-19 |
SMART |
low complexity region
|
134 |
144 |
N/A |
INTRINSIC |
low complexity region
|
188 |
206 |
N/A |
INTRINSIC |
PDZ
|
258 |
333 |
4.36e-24 |
SMART |
PDZ
|
355 |
428 |
2.49e-19 |
SMART |
PDZ
|
496 |
573 |
1.73e-18 |
SMART |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000041284
AA Change: E1561K
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000049176 Gene: ENSMUSG00000061859 AA Change: E1561K
Domain | Start | End | E-Value | Type |
L27
|
8 |
68 |
6.53e-9 |
SMART |
PDZ
|
143 |
221 |
1.78e-20 |
SMART |
PDZ
|
256 |
328 |
1.15e-23 |
SMART |
PDZ
|
374 |
453 |
3.15e-21 |
SMART |
coiled coil region
|
486 |
513 |
N/A |
INTRINSIC |
PDZ
|
570 |
641 |
1.28e-12 |
SMART |
PDZ
|
696 |
775 |
9.5e-16 |
SMART |
low complexity region
|
980 |
991 |
N/A |
INTRINSIC |
low complexity region
|
1054 |
1062 |
N/A |
INTRINSIC |
PDZ
|
1083 |
1166 |
8.65e-19 |
SMART |
PDZ
|
1253 |
1328 |
6.12e-19 |
SMART |
low complexity region
|
1356 |
1366 |
N/A |
INTRINSIC |
low complexity region
|
1410 |
1428 |
N/A |
INTRINSIC |
PDZ
|
1480 |
1555 |
4.36e-24 |
SMART |
PDZ
|
1577 |
1650 |
2.49e-19 |
SMART |
PDZ
|
1718 |
1795 |
2.13e-18 |
SMART |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000102792
AA Change: E339K
PolyPhen 2
Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
|
SMART Domains |
Protein: ENSMUSP00000099854 Gene: ENSMUSG00000061859 AA Change: E339K
Domain | Start | End | E-Value | Type |
PDZ
|
31 |
106 |
6.12e-19 |
SMART |
low complexity region
|
134 |
144 |
N/A |
INTRINSIC |
low complexity region
|
188 |
206 |
N/A |
INTRINSIC |
PDZ
|
258 |
333 |
4.36e-24 |
SMART |
PDZ
|
355 |
428 |
2.49e-19 |
SMART |
PDZ
|
496 |
573 |
2.13e-18 |
SMART |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000107029
AA Change: E988K
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000102644 Gene: ENSMUSG00000061859 AA Change: E988K
Domain | Start | End | E-Value | Type |
PDZ
|
1 |
68 |
1e-9 |
SMART |
PDZ
|
123 |
202 |
4.7e-18 |
SMART |
low complexity region
|
407 |
418 |
N/A |
INTRINSIC |
low complexity region
|
481 |
489 |
N/A |
INTRINSIC |
PDZ
|
510 |
593 |
4.3e-21 |
SMART |
PDZ
|
680 |
755 |
2.9e-21 |
SMART |
low complexity region
|
783 |
793 |
N/A |
INTRINSIC |
low complexity region
|
837 |
855 |
N/A |
INTRINSIC |
PDZ
|
907 |
982 |
2.2e-26 |
SMART |
PDZ
|
1004 |
1077 |
1.2e-21 |
SMART |
PDZ
|
1145 |
1222 |
1e-20 |
SMART |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000107034
AA Change: E1505K
PolyPhen 2
Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
|
SMART Domains |
Protein: ENSMUSP00000102649 Gene: ENSMUSG00000061859 AA Change: E1505K
Domain | Start | End | E-Value | Type |
L27
|
8 |
68 |
6.53e-9 |
SMART |
PDZ
|
143 |
221 |
1.78e-20 |
SMART |
PDZ
|
256 |
328 |
1.15e-23 |
SMART |
PDZ
|
374 |
453 |
3.15e-21 |
SMART |
coiled coil region
|
486 |
513 |
N/A |
INTRINSIC |
PDZ
|
566 |
637 |
1.28e-12 |
SMART |
PDZ
|
692 |
771 |
9.5e-16 |
SMART |
low complexity region
|
976 |
987 |
N/A |
INTRINSIC |
low complexity region
|
1050 |
1058 |
N/A |
INTRINSIC |
PDZ
|
1079 |
1162 |
8.65e-19 |
SMART |
PDZ
|
1249 |
1324 |
6.12e-19 |
SMART |
low complexity region
|
1352 |
1362 |
N/A |
INTRINSIC |
low complexity region
|
1382 |
1400 |
N/A |
INTRINSIC |
PDZ
|
1452 |
1499 |
7.78e0 |
SMART |
|
Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.4%
- 10x: 96.5%
- 20x: 93.5%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: This gene encodes a multivalent PDZ domain protein, which is expressed exclusively in brain and kidney. This protein selectively interacts with inward rectifier K+ (Kir) family members, N-methyl-D-aspartate receptor subunits, neurexins and neuroligins, as well as cell surface molecules enriched in synaptic membranes. Thus, this protein may serve as a scaffold that brings structurally diverse but functionally connected proteins into close proximity at the synapse. Multiple alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
|
Allele List at MGI |
All alleles(5) : Gene trapped(5) |
Other mutations in this stock |
Total: 92 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
4930522L14Rik |
A |
G |
5: 109,884,926 (GRCm39) |
|
probably benign |
Het |
Abcd2 |
C |
T |
15: 91,043,327 (GRCm39) |
M620I |
probably benign |
Het |
Ada |
T |
A |
2: 163,572,271 (GRCm39) |
I243F |
probably benign |
Het |
Adam12 |
T |
C |
7: 133,576,145 (GRCm39) |
|
probably null |
Het |
Adarb2 |
A |
T |
13: 8,253,224 (GRCm39) |
|
probably benign |
Het |
Adk |
A |
C |
14: 21,473,604 (GRCm39) |
Q287P |
probably benign |
Het |
Ahnak |
A |
G |
19: 8,986,771 (GRCm39) |
|
probably benign |
Het |
Aoc3 |
C |
T |
11: 101,222,432 (GRCm39) |
R223W |
probably damaging |
Het |
Aqp11 |
T |
C |
7: 97,378,228 (GRCm39) |
D229G |
probably benign |
Het |
Arhgap28 |
A |
G |
17: 68,203,220 (GRCm39) |
S78P |
probably damaging |
Het |
Bfsp2 |
T |
A |
9: 103,303,854 (GRCm39) |
E383D |
possibly damaging |
Het |
Bmpr1b |
A |
T |
3: 141,563,191 (GRCm39) |
V251D |
possibly damaging |
Het |
Calhm1 |
C |
T |
19: 47,132,280 (GRCm39) |
V112I |
probably benign |
Het |
Catsperd |
A |
G |
17: 56,966,554 (GRCm39) |
D508G |
probably damaging |
Het |
Cfap54 |
A |
G |
10: 92,710,805 (GRCm39) |
|
probably null |
Het |
Cfap70 |
A |
T |
14: 20,498,631 (GRCm39) |
Y19N |
probably damaging |
Het |
Chga |
A |
T |
12: 102,529,210 (GRCm39) |
R396* |
probably null |
Het |
Cntnap3 |
T |
C |
13: 64,926,690 (GRCm39) |
E560G |
probably damaging |
Het |
Csmd1 |
T |
C |
8: 15,971,759 (GRCm39) |
T3024A |
probably damaging |
Het |
Csrnp1 |
CCCTCCTCCTCCTCCTCCTC |
CCCTCCTCCTCCTCCTC |
9: 119,801,841 (GRCm39) |
|
probably benign |
Het |
Cysltr1 |
A |
G |
X: 105,622,261 (GRCm39) |
V75A |
possibly damaging |
Het |
Dnaaf11 |
T |
A |
15: 66,252,323 (GRCm39) |
M448L |
probably benign |
Het |
Dnah2 |
A |
T |
11: 69,313,952 (GRCm39) |
M4140K |
probably damaging |
Het |
Dph5 |
A |
G |
3: 115,722,352 (GRCm39) |
S277G |
probably benign |
Het |
Eftud2 |
A |
T |
11: 102,755,597 (GRCm39) |
D203E |
probably damaging |
Het |
Egf |
A |
G |
3: 129,499,882 (GRCm39) |
Y252H |
probably benign |
Het |
Egf |
A |
G |
3: 129,531,198 (GRCm39) |
S126P |
probably damaging |
Het |
Faf1 |
C |
T |
4: 109,748,138 (GRCm39) |
A481V |
probably benign |
Het |
Fat2 |
A |
T |
11: 55,153,655 (GRCm39) |
V3519D |
probably damaging |
Het |
Fbln7 |
C |
A |
2: 128,719,431 (GRCm39) |
A76E |
probably benign |
Het |
Galnt1 |
A |
T |
18: 24,387,582 (GRCm39) |
K49N |
probably benign |
Het |
Glb1 |
ACCC |
ACC |
9: 114,250,812 (GRCm39) |
|
probably null |
Het |
Grk1 |
T |
C |
8: 13,459,279 (GRCm39) |
Y277H |
probably damaging |
Het |
Hap1 |
A |
G |
11: 100,240,131 (GRCm39) |
L555P |
probably damaging |
Het |
Ier3 |
T |
C |
17: 36,133,000 (GRCm39) |
I94T |
possibly damaging |
Het |
Il11 |
T |
C |
7: 4,779,023 (GRCm39) |
T36A |
probably damaging |
Het |
Il5ra |
A |
T |
6: 106,708,851 (GRCm39) |
D296E |
probably damaging |
Het |
Itk |
A |
T |
11: 46,222,816 (GRCm39) |
V551E |
probably damaging |
Het |
Kcna2 |
T |
A |
3: 107,012,476 (GRCm39) |
D352E |
probably benign |
Het |
Kif5a |
A |
T |
10: 127,071,521 (GRCm39) |
S776T |
probably benign |
Het |
Klrb1c |
T |
C |
6: 128,757,366 (GRCm39) |
E233G |
probably benign |
Het |
Kpna7 |
T |
C |
5: 144,944,804 (GRCm39) |
K12R |
possibly damaging |
Het |
Lhpp |
C |
T |
7: 132,212,406 (GRCm39) |
|
probably benign |
Het |
Lhx8 |
A |
T |
3: 154,033,808 (GRCm39) |
|
probably null |
Het |
Magel2 |
T |
A |
7: 62,027,778 (GRCm39) |
H227Q |
possibly damaging |
Het |
Man1a |
A |
G |
10: 53,950,594 (GRCm39) |
V176A |
probably damaging |
Het |
Mapkbp1 |
T |
A |
2: 119,853,632 (GRCm39) |
M1152K |
probably benign |
Het |
Mcoln3 |
T |
A |
3: 145,846,331 (GRCm39) |
L547* |
probably null |
Het |
Myof |
T |
C |
19: 37,904,952 (GRCm39) |
D1624G |
probably damaging |
Het |
Myom2 |
T |
C |
8: 15,154,123 (GRCm39) |
V687A |
probably benign |
Het |
Nav1 |
C |
A |
1: 135,379,945 (GRCm39) |
V1586F |
possibly damaging |
Het |
Ndufb8 |
T |
C |
19: 44,538,784 (GRCm39) |
E179G |
possibly damaging |
Het |
Nfam1 |
T |
C |
15: 82,885,684 (GRCm39) |
T223A |
probably damaging |
Het |
Nrcam |
T |
A |
12: 44,598,124 (GRCm39) |
V371E |
probably damaging |
Het |
Nup210l |
A |
G |
3: 90,087,518 (GRCm39) |
Q1097R |
probably null |
Het |
Obox5 |
T |
A |
7: 15,491,571 (GRCm39) |
M37K |
probably damaging |
Het |
Obscn |
A |
T |
11: 58,952,356 (GRCm39) |
N4270K |
probably benign |
Het |
Or4d2 |
G |
A |
11: 87,784,022 (GRCm39) |
H243Y |
probably damaging |
Het |
Or5ak25 |
T |
A |
2: 85,268,630 (GRCm39) |
S291C |
probably damaging |
Het |
Or6c1 |
A |
G |
10: 129,517,708 (GRCm39) |
M300T |
probably benign |
Het |
Or8c15 |
G |
A |
9: 38,120,360 (GRCm39) |
A2T |
probably benign |
Het |
Or8k16 |
T |
C |
2: 85,520,183 (GRCm39) |
S137P |
possibly damaging |
Het |
Pnliprp1 |
T |
A |
19: 58,726,628 (GRCm39) |
Y328* |
probably null |
Het |
Ppp1r36 |
G |
A |
12: 76,465,741 (GRCm39) |
E43K |
probably damaging |
Het |
Ptch1 |
C |
T |
13: 63,668,121 (GRCm39) |
V939I |
probably damaging |
Het |
Rgs22 |
C |
A |
15: 36,093,084 (GRCm39) |
K396N |
probably damaging |
Het |
Rsrc1 |
A |
T |
3: 67,088,194 (GRCm39) |
H176L |
probably damaging |
Het |
Ryr3 |
A |
T |
2: 112,492,046 (GRCm39) |
F3743L |
probably damaging |
Het |
Scn7a |
C |
T |
2: 66,506,084 (GRCm39) |
G1602R |
probably benign |
Het |
Sftpc |
A |
T |
14: 70,760,110 (GRCm39) |
V49E |
probably damaging |
Het |
Slc16a10 |
A |
G |
10: 39,916,612 (GRCm39) |
V430A |
probably benign |
Het |
Slco4c1 |
A |
C |
1: 96,795,645 (GRCm39) |
S138A |
possibly damaging |
Het |
Snd1 |
T |
C |
6: 28,724,955 (GRCm39) |
I501T |
probably benign |
Het |
Stxbp2 |
T |
A |
8: 3,682,559 (GRCm39) |
D49E |
probably damaging |
Het |
Sytl4 |
A |
T |
X: 132,862,936 (GRCm39) |
D16E |
probably benign |
Het |
Tbc1d9b |
G |
A |
11: 50,035,894 (GRCm39) |
G130E |
probably benign |
Het |
Tdrd6 |
T |
A |
17: 43,936,452 (GRCm39) |
D1532V |
probably damaging |
Het |
Tekt1 |
T |
C |
11: 72,242,778 (GRCm39) |
D243G |
probably damaging |
Het |
Tet2 |
A |
G |
3: 133,192,427 (GRCm39) |
L669S |
possibly damaging |
Het |
Tnnt3 |
A |
G |
7: 142,066,072 (GRCm39) |
N201S |
probably benign |
Het |
Trdn |
A |
G |
10: 33,342,417 (GRCm39) |
|
probably null |
Het |
Trim36 |
T |
C |
18: 46,311,523 (GRCm39) |
E259G |
possibly damaging |
Het |
Trpm1 |
C |
T |
7: 63,870,002 (GRCm39) |
P436S |
probably benign |
Het |
Vmn1r183 |
T |
A |
7: 23,754,926 (GRCm39) |
L243Q |
probably damaging |
Het |
Vps13b |
T |
C |
15: 35,597,555 (GRCm39) |
S1032P |
probably damaging |
Het |
Vps37d |
T |
C |
5: 135,105,395 (GRCm39) |
E76G |
probably damaging |
Het |
Vps72 |
A |
G |
3: 95,028,615 (GRCm39) |
H202R |
probably benign |
Het |
Wdr75 |
T |
C |
1: 45,858,762 (GRCm39) |
S644P |
probably damaging |
Het |
Wrn |
T |
A |
8: 33,770,843 (GRCm39) |
E697V |
possibly damaging |
Het |
Xirp2 |
A |
G |
2: 67,345,262 (GRCm39) |
D2501G |
probably benign |
Het |
Zfp472 |
T |
C |
17: 33,194,936 (GRCm39) |
W24R |
probably damaging |
Het |
Zmym6 |
T |
C |
4: 127,016,565 (GRCm39) |
V782A |
probably damaging |
Het |
|
Other mutations in Patj |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00089:Patj
|
APN |
4 |
98,353,343 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00095:Patj
|
APN |
4 |
98,423,799 (GRCm39) |
missense |
possibly damaging |
0.78 |
IGL00517:Patj
|
APN |
4 |
98,329,308 (GRCm39) |
missense |
possibly damaging |
0.95 |
IGL00802:Patj
|
APN |
4 |
98,312,643 (GRCm39) |
missense |
possibly damaging |
0.93 |
IGL01064:Patj
|
APN |
4 |
98,385,210 (GRCm39) |
missense |
possibly damaging |
0.95 |
IGL01110:Patj
|
APN |
4 |
98,301,261 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01407:Patj
|
APN |
4 |
98,301,287 (GRCm39) |
missense |
possibly damaging |
0.49 |
IGL01821:Patj
|
APN |
4 |
98,344,448 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02399:Patj
|
APN |
4 |
98,480,173 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02494:Patj
|
APN |
4 |
98,592,224 (GRCm39) |
splice site |
probably benign |
|
IGL02803:Patj
|
APN |
4 |
98,314,301 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02931:Patj
|
APN |
4 |
98,299,410 (GRCm39) |
splice site |
probably benign |
|
IGL03017:Patj
|
APN |
4 |
98,353,264 (GRCm39) |
splice site |
probably benign |
|
IGL03115:Patj
|
APN |
4 |
98,332,040 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03209:Patj
|
APN |
4 |
98,353,377 (GRCm39) |
missense |
probably null |
1.00 |
IGL03377:Patj
|
APN |
4 |
98,353,341 (GRCm39) |
missense |
probably damaging |
1.00 |
D4186:Patj
|
UTSW |
4 |
98,526,999 (GRCm39) |
missense |
probably benign |
0.17 |
PIT4531001:Patj
|
UTSW |
4 |
98,329,327 (GRCm39) |
missense |
probably damaging |
0.98 |
R0136:Patj
|
UTSW |
4 |
98,555,885 (GRCm39) |
missense |
probably damaging |
1.00 |
R0294:Patj
|
UTSW |
4 |
98,385,285 (GRCm39) |
missense |
probably damaging |
0.99 |
R0376:Patj
|
UTSW |
4 |
98,457,224 (GRCm39) |
missense |
probably damaging |
1.00 |
R0465:Patj
|
UTSW |
4 |
98,423,744 (GRCm39) |
splice site |
probably null |
|
R0466:Patj
|
UTSW |
4 |
98,576,393 (GRCm39) |
missense |
probably damaging |
1.00 |
R0544:Patj
|
UTSW |
4 |
98,457,347 (GRCm39) |
missense |
probably damaging |
1.00 |
R0624:Patj
|
UTSW |
4 |
98,569,472 (GRCm39) |
splice site |
probably benign |
|
R0657:Patj
|
UTSW |
4 |
98,555,885 (GRCm39) |
missense |
probably damaging |
1.00 |
R1281:Patj
|
UTSW |
4 |
98,304,932 (GRCm39) |
missense |
probably damaging |
1.00 |
R1393:Patj
|
UTSW |
4 |
98,312,648 (GRCm39) |
missense |
probably benign |
0.01 |
R1480:Patj
|
UTSW |
4 |
98,357,819 (GRCm39) |
missense |
probably damaging |
1.00 |
R1667:Patj
|
UTSW |
4 |
98,301,264 (GRCm39) |
missense |
probably damaging |
1.00 |
R1728:Patj
|
UTSW |
4 |
98,320,017 (GRCm39) |
missense |
possibly damaging |
0.50 |
R1729:Patj
|
UTSW |
4 |
98,320,017 (GRCm39) |
missense |
possibly damaging |
0.50 |
R1797:Patj
|
UTSW |
4 |
98,575,675 (GRCm39) |
missense |
probably damaging |
1.00 |
R1818:Patj
|
UTSW |
4 |
98,511,885 (GRCm39) |
missense |
possibly damaging |
0.85 |
R1835:Patj
|
UTSW |
4 |
98,379,827 (GRCm39) |
missense |
probably benign |
0.00 |
R1880:Patj
|
UTSW |
4 |
98,385,477 (GRCm39) |
missense |
probably benign |
0.00 |
R2009:Patj
|
UTSW |
4 |
98,344,406 (GRCm39) |
missense |
probably damaging |
1.00 |
R2090:Patj
|
UTSW |
4 |
98,325,560 (GRCm39) |
unclassified |
probably benign |
|
R2120:Patj
|
UTSW |
4 |
98,344,462 (GRCm39) |
missense |
probably benign |
0.01 |
R2180:Patj
|
UTSW |
4 |
98,411,739 (GRCm39) |
critical splice donor site |
probably null |
|
R2655:Patj
|
UTSW |
4 |
98,325,687 (GRCm39) |
missense |
possibly damaging |
0.64 |
R3156:Patj
|
UTSW |
4 |
98,562,465 (GRCm39) |
missense |
probably damaging |
1.00 |
R3749:Patj
|
UTSW |
4 |
98,357,837 (GRCm39) |
missense |
probably damaging |
1.00 |
R3767:Patj
|
UTSW |
4 |
98,569,456 (GRCm39) |
nonsense |
probably null |
|
R3913:Patj
|
UTSW |
4 |
98,457,338 (GRCm39) |
missense |
probably damaging |
0.99 |
R3917:Patj
|
UTSW |
4 |
98,480,245 (GRCm39) |
nonsense |
probably null |
|
R3918:Patj
|
UTSW |
4 |
98,344,455 (GRCm39) |
missense |
probably damaging |
1.00 |
R4299:Patj
|
UTSW |
4 |
98,565,558 (GRCm39) |
missense |
possibly damaging |
0.89 |
R4355:Patj
|
UTSW |
4 |
98,538,691 (GRCm39) |
missense |
possibly damaging |
0.87 |
R4471:Patj
|
UTSW |
4 |
98,423,816 (GRCm39) |
missense |
probably damaging |
1.00 |
R4762:Patj
|
UTSW |
4 |
98,293,807 (GRCm39) |
nonsense |
probably null |
|
R4877:Patj
|
UTSW |
4 |
98,457,295 (GRCm39) |
missense |
possibly damaging |
0.94 |
R4945:Patj
|
UTSW |
4 |
98,383,301 (GRCm39) |
missense |
probably damaging |
0.97 |
R5274:Patj
|
UTSW |
4 |
98,407,218 (GRCm39) |
missense |
probably damaging |
0.99 |
R5343:Patj
|
UTSW |
4 |
98,564,430 (GRCm39) |
missense |
probably damaging |
1.00 |
R5554:Patj
|
UTSW |
4 |
98,342,633 (GRCm39) |
missense |
possibly damaging |
0.79 |
R5688:Patj
|
UTSW |
4 |
98,409,047 (GRCm39) |
nonsense |
probably null |
|
R5880:Patj
|
UTSW |
4 |
98,299,382 (GRCm39) |
missense |
probably damaging |
0.96 |
R5972:Patj
|
UTSW |
4 |
98,457,290 (GRCm39) |
missense |
probably damaging |
0.98 |
R6149:Patj
|
UTSW |
4 |
98,312,562 (GRCm39) |
missense |
possibly damaging |
0.72 |
R6192:Patj
|
UTSW |
4 |
98,344,394 (GRCm39) |
missense |
probably damaging |
1.00 |
R6265:Patj
|
UTSW |
4 |
98,357,804 (GRCm39) |
missense |
probably benign |
0.08 |
R6350:Patj
|
UTSW |
4 |
98,293,855 (GRCm39) |
missense |
probably benign |
0.26 |
R6363:Patj
|
UTSW |
4 |
98,320,097 (GRCm39) |
missense |
probably benign |
0.25 |
R6434:Patj
|
UTSW |
4 |
98,379,866 (GRCm39) |
missense |
probably damaging |
1.00 |
R6496:Patj
|
UTSW |
4 |
98,304,989 (GRCm39) |
missense |
probably damaging |
1.00 |
R6896:Patj
|
UTSW |
4 |
98,314,287 (GRCm39) |
missense |
possibly damaging |
0.87 |
R7039:Patj
|
UTSW |
4 |
98,457,315 (GRCm39) |
missense |
probably damaging |
0.96 |
R7040:Patj
|
UTSW |
4 |
98,329,317 (GRCm39) |
missense |
probably benign |
0.02 |
R7052:Patj
|
UTSW |
4 |
98,565,497 (GRCm39) |
missense |
probably benign |
0.03 |
R7066:Patj
|
UTSW |
4 |
98,301,434 (GRCm39) |
missense |
probably benign |
0.24 |
R7236:Patj
|
UTSW |
4 |
98,299,294 (GRCm39) |
missense |
probably damaging |
1.00 |
R7242:Patj
|
UTSW |
4 |
98,480,170 (GRCm39) |
missense |
probably benign |
0.26 |
R7260:Patj
|
UTSW |
4 |
98,304,970 (GRCm39) |
missense |
possibly damaging |
0.94 |
R7412:Patj
|
UTSW |
4 |
98,299,376 (GRCm39) |
missense |
probably damaging |
0.98 |
R7493:Patj
|
UTSW |
4 |
98,383,298 (GRCm39) |
missense |
probably benign |
0.41 |
R7570:Patj
|
UTSW |
4 |
98,312,737 (GRCm39) |
splice site |
probably null |
|
R7571:Patj
|
UTSW |
4 |
98,457,217 (GRCm39) |
missense |
probably damaging |
1.00 |
R7626:Patj
|
UTSW |
4 |
98,435,224 (GRCm39) |
missense |
probably benign |
0.35 |
R7658:Patj
|
UTSW |
4 |
98,576,416 (GRCm39) |
missense |
probably damaging |
1.00 |
R7664:Patj
|
UTSW |
4 |
98,385,187 (GRCm39) |
missense |
possibly damaging |
0.92 |
R7669:Patj
|
UTSW |
4 |
98,407,179 (GRCm39) |
missense |
probably damaging |
1.00 |
R7796:Patj
|
UTSW |
4 |
98,435,220 (GRCm39) |
start codon destroyed |
probably benign |
0.05 |
R7870:Patj
|
UTSW |
4 |
98,312,553 (GRCm39) |
missense |
probably damaging |
1.00 |
R7883:Patj
|
UTSW |
4 |
98,499,372 (GRCm39) |
missense |
probably benign |
0.00 |
R7948:Patj
|
UTSW |
4 |
98,312,547 (GRCm39) |
missense |
probably damaging |
0.99 |
R8050:Patj
|
UTSW |
4 |
98,427,201 (GRCm39) |
missense |
probably benign |
0.00 |
R8183:Patj
|
UTSW |
4 |
98,562,466 (GRCm39) |
missense |
probably damaging |
0.96 |
R8239:Patj
|
UTSW |
4 |
98,570,308 (GRCm39) |
missense |
possibly damaging |
0.90 |
R8483:Patj
|
UTSW |
4 |
98,312,539 (GRCm39) |
missense |
probably damaging |
1.00 |
R8546:Patj
|
UTSW |
4 |
98,325,634 (GRCm39) |
missense |
probably benign |
0.00 |
R8746:Patj
|
UTSW |
4 |
98,394,067 (GRCm39) |
intron |
probably benign |
|
R8844:Patj
|
UTSW |
4 |
98,480,206 (GRCm39) |
missense |
probably damaging |
1.00 |
R8905:Patj
|
UTSW |
4 |
98,385,412 (GRCm39) |
missense |
probably damaging |
1.00 |
R8912:Patj
|
UTSW |
4 |
98,385,565 (GRCm39) |
missense |
|
|
R8959:Patj
|
UTSW |
4 |
98,480,212 (GRCm39) |
missense |
probably damaging |
0.99 |
R9083:Patj
|
UTSW |
4 |
98,401,871 (GRCm39) |
missense |
probably benign |
0.03 |
R9173:Patj
|
UTSW |
4 |
98,526,958 (GRCm39) |
missense |
probably benign |
|
R9206:Patj
|
UTSW |
4 |
98,427,310 (GRCm39) |
missense |
unknown |
|
R9208:Patj
|
UTSW |
4 |
98,427,310 (GRCm39) |
missense |
unknown |
|
R9347:Patj
|
UTSW |
4 |
98,576,484 (GRCm39) |
missense |
probably benign |
0.19 |
R9560:Patj
|
UTSW |
4 |
98,570,289 (GRCm39) |
missense |
probably benign |
0.29 |
R9609:Patj
|
UTSW |
4 |
98,576,473 (GRCm39) |
missense |
probably benign |
0.00 |
R9617:Patj
|
UTSW |
4 |
98,393,991 (GRCm39) |
missense |
probably benign |
0.03 |
R9658:Patj
|
UTSW |
4 |
98,353,377 (GRCm39) |
missense |
probably null |
1.00 |
R9756:Patj
|
UTSW |
4 |
98,565,535 (GRCm39) |
missense |
probably benign |
|
Z1176:Patj
|
UTSW |
4 |
98,564,555 (GRCm39) |
nonsense |
probably null |
|
Z1176:Patj
|
UTSW |
4 |
98,499,367 (GRCm39) |
missense |
probably benign |
0.11 |
Z1177:Patj
|
UTSW |
4 |
98,385,411 (GRCm39) |
missense |
probably benign |
0.01 |
|
Predicted Primers |
PCR Primer
(F):5'- CTGAAGCCTCTGTTGTAAGACACCC -3'
(R):5'- CTTACTGTGGAGCTGAGTGCAGAC -3'
Sequencing Primer
(F):5'- GTTGTAAGACACCCGTCTCAG -3'
(R):5'- CCCAGCTAGAATCAGGTGTG -3'
|
Posted On |
2013-05-23 |