Incidental Mutation 'IGL03270:Or6k2'
| ID |
415232 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Or6k2
|
| Ensembl Gene |
ENSMUSG00000055033 |
| Gene Name |
olfactory receptor family 6 subfamily K member 2 |
| Synonyms |
GA_x6K02T2P20D-20995211-20994246, MOR105-10, Olfr420 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.141)
|
| Stock # |
IGL03270
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
1 |
| Chromosomal Location |
173986288-173987333 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to A
at 173987119 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Methionine to Lysine
at position 260
(M260K)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000149052
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000068403]
[ENSMUST00000213748]
|
| AlphaFold |
E9Q4G0 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000068403
AA Change: M260K
PolyPhen 2
Score 0.037 (Sensitivity: 0.94; Specificity: 0.82)
|
| SMART Domains |
Protein: ENSMUSP00000069662
Gene: ENSMUSG00000055033
AA Change: M260K
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
310 |
9.9e-60 |
PFAM |
|
Pfam:7tm_1
|
41 |
292 |
4.1e-20 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000213748
AA Change: M260K
PolyPhen 2
Score 0.037 (Sensitivity: 0.94; Specificity: 0.82)
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 22 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Ctnnd1 |
A |
T |
2: 84,440,071 (GRCm39) |
|
probably null |
Het |
| Fcmr |
A |
T |
1: 130,803,779 (GRCm39) |
R194S |
possibly damaging |
Het |
| Fmo2 |
A |
G |
1: 162,709,595 (GRCm39) |
F264S |
probably damaging |
Het |
| Gfra2 |
A |
G |
14: 71,163,344 (GRCm39) |
D209G |
possibly damaging |
Het |
| Hsd17b7 |
C |
T |
1: 169,780,649 (GRCm39) |
E320K |
probably damaging |
Het |
| Iigp1c |
A |
G |
18: 60,378,548 (GRCm39) |
K28E |
probably benign |
Het |
| Kifap3 |
T |
A |
1: 163,676,302 (GRCm39) |
M419K |
probably benign |
Het |
| Lgr6 |
A |
C |
1: 134,925,442 (GRCm39) |
I133S |
probably damaging |
Het |
| Med13l |
A |
C |
5: 118,869,495 (GRCm39) |
N811T |
probably damaging |
Het |
| Or4c118 |
A |
G |
2: 88,975,089 (GRCm39) |
F93L |
probably damaging |
Het |
| Pappa2 |
T |
A |
1: 158,592,637 (GRCm39) |
D1580V |
possibly damaging |
Het |
| Ppp4r2 |
T |
G |
6: 100,840,086 (GRCm39) |
N72K |
probably damaging |
Het |
| Prr27 |
T |
C |
5: 87,983,537 (GRCm39) |
|
probably benign |
Het |
| Rad51d |
A |
G |
11: 82,772,420 (GRCm39) |
|
probably benign |
Het |
| Rel |
T |
C |
11: 23,692,584 (GRCm39) |
N483S |
probably benign |
Het |
| Scn9a |
A |
G |
2: 66,314,358 (GRCm39) |
F1776L |
probably damaging |
Het |
| Slco5a1 |
G |
A |
1: 12,942,252 (GRCm39) |
T798I |
probably benign |
Het |
| Ttn |
T |
C |
2: 76,606,811 (GRCm39) |
D18033G |
probably damaging |
Het |
| Vmn1r46 |
T |
A |
6: 89,953,756 (GRCm39) |
S202T |
probably damaging |
Het |
| Vmn2r110 |
T |
G |
17: 20,803,778 (GRCm39) |
M266L |
probably benign |
Het |
| Vmn2r26 |
A |
T |
6: 124,027,778 (GRCm39) |
D506V |
probably benign |
Het |
| Zbtb1 |
T |
C |
12: 76,432,289 (GRCm39) |
S92P |
possibly damaging |
Het |
|
| Other mutations in Or6k2 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01394:Or6k2
|
APN |
1 |
173,986,423 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02479:Or6k2
|
APN |
1 |
173,986,520 (GRCm39) |
nonsense |
probably null |
|
|
IGL03190:Or6k2
|
APN |
1 |
173,987,110 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R0645:Or6k2
|
UTSW |
1 |
173,986,920 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0834:Or6k2
|
UTSW |
1 |
173,986,930 (GRCm39) |
missense |
possibly damaging |
0.55 |
|
R1432:Or6k2
|
UTSW |
1 |
173,986,483 (GRCm39) |
missense |
possibly damaging |
0.67 |
|
R1508:Or6k2
|
UTSW |
1 |
173,986,930 (GRCm39) |
missense |
possibly damaging |
0.55 |
|
R2351:Or6k2
|
UTSW |
1 |
173,986,486 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R3440:Or6k2
|
UTSW |
1 |
173,986,746 (GRCm39) |
missense |
probably benign |
0.14 |
|
R3441:Or6k2
|
UTSW |
1 |
173,986,746 (GRCm39) |
missense |
probably benign |
0.14 |
|
R4571:Or6k2
|
UTSW |
1 |
173,986,494 (GRCm39) |
missense |
possibly damaging |
0.77 |
|
R5072:Or6k2
|
UTSW |
1 |
173,986,527 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6060:Or6k2
|
UTSW |
1 |
173,986,907 (GRCm39) |
nonsense |
probably null |
|
|
R6166:Or6k2
|
UTSW |
1 |
173,986,659 (GRCm39) |
missense |
probably benign |
0.43 |
|
R6228:Or6k2
|
UTSW |
1 |
173,979,712 (GRCm39) |
missense |
probably benign |
0.00 |
|
R6272:Or6k2
|
UTSW |
1 |
173,986,741 (GRCm39) |
missense |
probably benign |
0.02 |
|
R6298:Or6k2
|
UTSW |
1 |
173,979,748 (GRCm39) |
missense |
probably benign |
0.02 |
|
R6400:Or6k2
|
UTSW |
1 |
173,986,830 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R7581:Or6k2
|
UTSW |
1 |
173,986,337 (GRCm39) |
splice site |
probably null |
|
|
R7677:Or6k2
|
UTSW |
1 |
173,986,614 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7823:Or6k2
|
UTSW |
1 |
173,987,254 (GRCm39) |
missense |
probably benign |
0.12 |
|
R7829:Or6k2
|
UTSW |
1 |
173,986,425 (GRCm39) |
missense |
probably benign |
0.00 |
|
R8077:Or6k2
|
UTSW |
1 |
173,979,411 (GRCm39) |
unclassified |
probably benign |
|
|
R8519:Or6k2
|
UTSW |
1 |
173,986,614 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9106:Or6k2
|
UTSW |
1 |
173,986,369 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9205:Or6k2
|
UTSW |
1 |
173,986,456 (GRCm39) |
missense |
probably benign |
0.33 |
|
R9507:Or6k2
|
UTSW |
1 |
173,986,552 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R9797:Or6k2
|
UTSW |
1 |
173,986,417 (GRCm39) |
missense |
probably benign |
|
|
Z1187:Or6k2
|
UTSW |
1 |
173,986,907 (GRCm39) |
nonsense |
probably null |
|
|
Z1192:Or6k2
|
UTSW |
1 |
173,986,907 (GRCm39) |
nonsense |
probably null |
|
|
| Posted On |
2016-08-02 |
Incidental Mutation