Incidental Mutation 'IGL03274:Gm5422'
ID |
415353 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Gm5422
|
Ensembl Gene |
ENSMUSG00000039684 |
Gene Name |
predicted pseudogene 5422 |
Synonyms |
|
Accession Numbers |
|
Essential gene? |
Probably essential
(E-score: 0.915)
|
Stock # |
IGL03274
|
Quality Score |
|
Status
|
|
Chromosome |
10 |
Chromosomal Location |
31124133-31127039 bp(+) (GRCm39) |
Type of Mutation |
exon |
DNA Base Change (assembly) |
G to T
at 31126348 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
|
Gene Model |
predicted gene model for transcript(s):
|
AlphaFold |
no structure available at present |
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000050717
|
SMART Domains |
Protein: ENSMUSP00000135967 Gene: ENSMUSG00000039684
Domain | Start | End | E-Value | Type |
low complexity region
|
44 |
61 |
N/A |
INTRINSIC |
Pfam:PC_rep
|
438 |
474 |
6.8e-9 |
PFAM |
Pfam:PC_rep
|
475 |
509 |
1.1e-8 |
PFAM |
SCOP:d1gw5a_
|
603 |
760 |
4e-4 |
SMART |
PDB:4CR4|Z
|
648 |
901 |
1e-50 |
PDB |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000216161
|
Coding Region Coverage |
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 32 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Adissp |
A |
T |
2: 130,995,512 (GRCm39) |
|
probably null |
Het |
Anln |
C |
A |
9: 22,293,565 (GRCm39) |
R26M |
probably damaging |
Het |
Capn15 |
A |
T |
17: 26,180,812 (GRCm39) |
S753T |
probably damaging |
Het |
Ccdc62 |
A |
G |
5: 124,092,743 (GRCm39) |
N576S |
probably benign |
Het |
Csmd3 |
T |
C |
15: 47,508,900 (GRCm39) |
D2895G |
probably damaging |
Het |
Dspp |
T |
A |
5: 104,322,814 (GRCm39) |
V37E |
probably damaging |
Het |
Efcab3 |
A |
T |
11: 104,611,919 (GRCm39) |
D587V |
probably benign |
Het |
Efcab6 |
T |
C |
15: 83,752,450 (GRCm39) |
D1473G |
probably damaging |
Het |
Ehhadh |
T |
C |
16: 21,582,090 (GRCm39) |
|
probably benign |
Het |
Fbln1 |
T |
C |
15: 85,116,879 (GRCm39) |
|
probably null |
Het |
Gbp9 |
A |
G |
5: 105,230,652 (GRCm39) |
V424A |
possibly damaging |
Het |
Gda |
T |
C |
19: 21,394,371 (GRCm39) |
Y236C |
possibly damaging |
Het |
Gm4884 |
A |
G |
7: 40,693,969 (GRCm39) |
E646G |
probably damaging |
Het |
Gm4952 |
C |
A |
19: 12,600,960 (GRCm39) |
|
probably benign |
Het |
Grin2b |
C |
T |
6: 135,757,253 (GRCm39) |
D403N |
possibly damaging |
Het |
Hsf2bp |
G |
A |
17: 32,226,744 (GRCm39) |
R204C |
probably damaging |
Het |
Il16 |
T |
C |
7: 83,310,442 (GRCm39) |
E488G |
probably damaging |
Het |
Kat6b |
G |
T |
14: 21,659,831 (GRCm39) |
D212Y |
possibly damaging |
Het |
Kctd2 |
A |
C |
11: 115,320,208 (GRCm39) |
I247L |
possibly damaging |
Het |
Kel |
T |
A |
6: 41,664,929 (GRCm39) |
|
probably null |
Het |
Krt20 |
A |
T |
11: 99,320,855 (GRCm39) |
|
probably benign |
Het |
Litaf |
T |
C |
16: 10,784,433 (GRCm39) |
T26A |
probably damaging |
Het |
N4bp2l2 |
G |
T |
5: 150,584,931 (GRCm39) |
Q350K |
probably damaging |
Het |
Nav2 |
T |
G |
7: 49,011,847 (GRCm39) |
I26S |
probably damaging |
Het |
Nfya |
A |
G |
17: 48,698,375 (GRCm39) |
Y162H |
probably damaging |
Het |
Or2g25 |
C |
T |
17: 37,970,646 (GRCm39) |
A193T |
probably benign |
Het |
Pbx4 |
A |
T |
8: 70,319,200 (GRCm39) |
S244C |
probably damaging |
Het |
Pcdhb16 |
T |
C |
18: 37,612,285 (GRCm39) |
V415A |
probably benign |
Het |
Rbbp8 |
A |
G |
18: 11,874,133 (GRCm39) |
|
probably benign |
Het |
Sp100 |
T |
C |
1: 85,635,025 (GRCm39) |
|
probably benign |
Het |
Spag16 |
A |
G |
1: 69,883,540 (GRCm39) |
|
probably benign |
Het |
Star |
A |
G |
8: 26,301,082 (GRCm39) |
D138G |
possibly damaging |
Het |
|
Other mutations in Gm5422 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01306:Gm5422
|
APN |
10 |
31,125,432 (GRCm39) |
exon |
noncoding transcript |
|
IGL01569:Gm5422
|
APN |
10 |
31,125,897 (GRCm39) |
exon |
noncoding transcript |
|
IGL01645:Gm5422
|
APN |
10 |
31,126,069 (GRCm39) |
exon |
noncoding transcript |
|
IGL02273:Gm5422
|
APN |
10 |
31,126,003 (GRCm39) |
exon |
noncoding transcript |
|
IGL02603:Gm5422
|
APN |
10 |
31,125,436 (GRCm39) |
exon |
noncoding transcript |
|
IGL02928:Gm5422
|
APN |
10 |
31,126,250 (GRCm39) |
exon |
noncoding transcript |
|
IGL03003:Gm5422
|
APN |
10 |
31,126,840 (GRCm39) |
exon |
noncoding transcript |
|
IGL03297:Gm5422
|
APN |
10 |
31,125,727 (GRCm39) |
exon |
noncoding transcript |
|
ANU23:Gm5422
|
UTSW |
10 |
31,125,432 (GRCm39) |
exon |
noncoding transcript |
|
R0010:Gm5422
|
UTSW |
10 |
31,125,750 (GRCm39) |
exon |
noncoding transcript |
|
R0506:Gm5422
|
UTSW |
10 |
31,126,318 (GRCm39) |
exon |
noncoding transcript |
|
R0560:Gm5422
|
UTSW |
10 |
31,125,240 (GRCm39) |
exon |
noncoding transcript |
|
R0573:Gm5422
|
UTSW |
10 |
31,126,156 (GRCm39) |
exon |
noncoding transcript |
|
R0652:Gm5422
|
UTSW |
10 |
31,125,277 (GRCm39) |
exon |
noncoding transcript |
|
R1210:Gm5422
|
UTSW |
10 |
31,126,719 (GRCm39) |
intron |
noncoding transcript |
|
R1259:Gm5422
|
UTSW |
10 |
31,125,111 (GRCm39) |
exon |
noncoding transcript |
|
R1352:Gm5422
|
UTSW |
10 |
31,126,731 (GRCm39) |
intron |
noncoding transcript |
|
R1631:Gm5422
|
UTSW |
10 |
31,125,802 (GRCm39) |
exon |
noncoding transcript |
|
R1707:Gm5422
|
UTSW |
10 |
31,124,458 (GRCm39) |
exon |
noncoding transcript |
|
R1893:Gm5422
|
UTSW |
10 |
31,125,609 (GRCm39) |
exon |
noncoding transcript |
|
R2011:Gm5422
|
UTSW |
10 |
31,124,764 (GRCm39) |
exon |
noncoding transcript |
|
R2132:Gm5422
|
UTSW |
10 |
31,124,929 (GRCm39) |
exon |
noncoding transcript |
|
R3427:Gm5422
|
UTSW |
10 |
31,124,842 (GRCm39) |
exon |
noncoding transcript |
|
R3772:Gm5422
|
UTSW |
10 |
31,124,510 (GRCm39) |
exon |
noncoding transcript |
|
R4703:Gm5422
|
UTSW |
10 |
31,125,608 (GRCm39) |
exon |
noncoding transcript |
|
R5539:Gm5422
|
UTSW |
10 |
31,124,646 (GRCm39) |
exon |
noncoding transcript |
|
R5603:Gm5422
|
UTSW |
10 |
31,126,840 (GRCm39) |
exon |
noncoding transcript |
|
R5660:Gm5422
|
UTSW |
10 |
31,126,048 (GRCm39) |
exon |
noncoding transcript |
|
R6124:Gm5422
|
UTSW |
10 |
31,125,396 (GRCm39) |
exon |
noncoding transcript |
|
R6178:Gm5422
|
UTSW |
10 |
31,125,688 (GRCm39) |
exon |
noncoding transcript |
|
R8263:Gm5422
|
UTSW |
10 |
31,125,099 (GRCm39) |
missense |
noncoding transcript |
|
|
Posted On |
2016-08-02 |