Incidental Mutation 'IGL03278:Slc38a9'
ID 415504
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Slc38a9
Ensembl Gene ENSMUSG00000047789
Gene Name solute carrier family 38, member 9
Synonyms 9430067K09Rik, 9130023D20Rik, 4833412L08Rik, 6720411P22Rik
Accession Numbers
Essential gene? Probably non essential (E-score: 0.233) question?
Stock # IGL03278
Quality Score
Status
Chromosome 13
Chromosomal Location 112797285-112875283 bp(+) (GRCm39)
Type of Mutation splice site
DNA Base Change (assembly) T to G at 112826052 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000152914 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000052514] [ENSMUST00000223581]
AlphaFold Q8BGD6
Predicted Effect probably benign
Transcript: ENSMUST00000052514
SMART Domains Protein: ENSMUSP00000052172
Gene: ENSMUSG00000047789

DomainStartEndE-ValueType
Pfam:Aa_trans 114 253 4.5e-17 PFAM
Pfam:Aa_trans 266 560 2.5e-16 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000223581
Predicted Effect noncoding transcript
Transcript: ENSMUST00000223839
Predicted Effect noncoding transcript
Transcript: ENSMUST00000224584
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 39 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
2700049A03Rik T A 12: 71,205,599 (GRCm39) probably benign Het
Acss2 A G 2: 155,403,921 (GRCm39) D676G possibly damaging Het
Antxr1 A G 6: 87,181,439 (GRCm39) probably benign Het
Ccdc134 C T 15: 82,015,682 (GRCm39) A54V possibly damaging Het
Ccdc40 A T 11: 119,133,336 (GRCm39) I465F probably damaging Het
Cdk5rap1 A T 2: 154,212,622 (GRCm39) S79T probably benign Het
Col6a6 T C 9: 105,586,651 (GRCm39) E1790G probably benign Het
Cops8 C A 1: 90,532,087 (GRCm39) probably null Het
Dnah7a T C 1: 53,536,124 (GRCm39) T2640A probably benign Het
F2 G A 2: 91,465,527 (GRCm39) A86V probably benign Het
Fhip1b C A 7: 105,034,331 (GRCm39) M433I possibly damaging Het
Gabrb1 T G 5: 72,026,939 (GRCm39) D113E probably damaging Het
Git2 C A 5: 114,883,640 (GRCm39) probably benign Het
Git2 A T 5: 114,883,641 (GRCm39) probably null Het
Gm4847 A T 1: 166,462,605 (GRCm39) I295N probably benign Het
H2-M10.6 C A 17: 37,124,715 (GRCm39) H211N probably damaging Het
Hmgcr A G 13: 96,793,270 (GRCm39) probably benign Het
Larp1 T C 11: 57,934,882 (GRCm39) probably benign Het
Lrguk A G 6: 34,093,381 (GRCm39) E634G possibly damaging Het
Nanog A G 6: 122,688,704 (GRCm39) Y95C probably damaging Het
Nelfcd G A 2: 174,268,625 (GRCm39) A559T possibly damaging Het
Nfe2l1 C A 11: 96,713,018 (GRCm39) R55L probably benign Het
Or1f19 C T 16: 3,410,971 (GRCm39) A237V possibly damaging Het
Pkmyt1 A G 17: 23,953,221 (GRCm39) E259G probably damaging Het
Pld4 A G 12: 112,733,165 (GRCm39) N247S probably damaging Het
Prdm4 A T 10: 85,743,622 (GRCm39) M211K probably damaging Het
Rab37 A C 11: 115,050,517 (GRCm39) I121L possibly damaging Het
Rabl6 T C 2: 25,473,834 (GRCm39) probably benign Het
Slc34a3 A T 2: 25,122,059 (GRCm39) V154E probably benign Het
Sptlc3 G A 2: 139,431,579 (GRCm39) G367D probably damaging Het
Stk24 T C 14: 121,540,182 (GRCm39) K139R possibly damaging Het
Tacc2 T C 7: 130,335,298 (GRCm39) probably null Het
Tap1 A T 17: 34,410,457 (GRCm39) K378M probably damaging Het
Tfr2 A T 5: 137,569,298 (GRCm39) R10* probably null Het
Trim38 A G 13: 23,974,979 (GRCm39) D306G possibly damaging Het
Ttc6 A T 12: 57,668,812 (GRCm39) K418I probably damaging Het
Ush2a T A 1: 188,581,313 (GRCm39) L3731Q probably damaging Het
Vmn2r89 A T 14: 51,692,557 (GRCm39) Y120F probably damaging Het
Vps35 A T 8: 86,021,590 (GRCm39) probably benign Het
Other mutations in Slc38a9
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00427:Slc38a9 APN 13 112,838,152 (GRCm39) missense probably damaging 1.00
IGL01950:Slc38a9 APN 13 112,831,787 (GRCm39) missense probably damaging 1.00
IGL01955:Slc38a9 APN 13 112,831,952 (GRCm39) splice site probably benign
IGL02352:Slc38a9 APN 13 112,826,720 (GRCm39) missense probably benign 0.10
IGL02359:Slc38a9 APN 13 112,826,720 (GRCm39) missense probably benign 0.10
IGL02407:Slc38a9 APN 13 112,826,777 (GRCm39) missense probably benign
IGL02511:Slc38a9 APN 13 112,834,541 (GRCm39) missense possibly damaging 0.47
IGL02588:Slc38a9 APN 13 112,834,511 (GRCm39) splice site probably null
R0126:Slc38a9 UTSW 13 112,865,791 (GRCm39) missense possibly damaging 0.52
R0553:Slc38a9 UTSW 13 112,850,732 (GRCm39) missense probably damaging 1.00
R0558:Slc38a9 UTSW 13 112,865,730 (GRCm39) critical splice acceptor site probably null
R0699:Slc38a9 UTSW 13 112,859,823 (GRCm39) missense probably damaging 1.00
R1036:Slc38a9 UTSW 13 112,838,193 (GRCm39) splice site probably benign
R1142:Slc38a9 UTSW 13 112,850,744 (GRCm39) missense probably damaging 1.00
R1344:Slc38a9 UTSW 13 112,826,714 (GRCm39) missense probably benign 0.20
R1418:Slc38a9 UTSW 13 112,826,714 (GRCm39) missense probably benign 0.20
R4223:Slc38a9 UTSW 13 112,850,782 (GRCm39) critical splice donor site probably null
R4344:Slc38a9 UTSW 13 112,865,749 (GRCm39) missense probably benign 0.02
R4824:Slc38a9 UTSW 13 112,859,832 (GRCm39) missense probably damaging 0.98
R4872:Slc38a9 UTSW 13 112,826,098 (GRCm39) missense probably damaging 1.00
R5841:Slc38a9 UTSW 13 112,831,856 (GRCm39) missense possibly damaging 0.76
R5844:Slc38a9 UTSW 13 112,868,035 (GRCm39) missense probably damaging 1.00
R6039:Slc38a9 UTSW 13 112,806,231 (GRCm39) missense probably damaging 1.00
R6039:Slc38a9 UTSW 13 112,806,231 (GRCm39) missense probably damaging 1.00
R6151:Slc38a9 UTSW 13 112,825,910 (GRCm39) missense probably damaging 1.00
R6166:Slc38a9 UTSW 13 112,831,801 (GRCm39) missense possibly damaging 0.96
R6175:Slc38a9 UTSW 13 112,840,093 (GRCm39) nonsense probably null
R6324:Slc38a9 UTSW 13 112,862,634 (GRCm39) missense probably benign 0.01
R6747:Slc38a9 UTSW 13 112,826,714 (GRCm39) missense probably benign 0.20
R6920:Slc38a9 UTSW 13 112,838,060 (GRCm39) missense possibly damaging 0.63
R7342:Slc38a9 UTSW 13 112,806,125 (GRCm39) start gained probably benign
R7592:Slc38a9 UTSW 13 112,831,889 (GRCm39) missense probably damaging 0.99
R7787:Slc38a9 UTSW 13 112,825,880 (GRCm39) missense probably damaging 0.99
R7860:Slc38a9 UTSW 13 112,868,148 (GRCm39) missense probably benign
R8742:Slc38a9 UTSW 13 112,865,818 (GRCm39) missense probably damaging 1.00
R8799:Slc38a9 UTSW 13 112,840,136 (GRCm39) missense probably damaging 1.00
R8824:Slc38a9 UTSW 13 112,838,021 (GRCm39) missense probably benign
R8846:Slc38a9 UTSW 13 112,859,814 (GRCm39) nonsense probably null
R9112:Slc38a9 UTSW 13 112,850,777 (GRCm39) missense probably damaging 0.99
R9221:Slc38a9 UTSW 13 112,825,910 (GRCm39) missense probably damaging 1.00
R9780:Slc38a9 UTSW 13 112,862,591 (GRCm39) missense probably damaging 0.97
Posted On 2016-08-02