Incidental Mutation 'IGL03295:Chrac1'
ID 416056
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Chrac1
Ensembl Gene ENSMUSG00000068391
Gene Name chromatin accessibility complex 1
Synonyms YCL1, 2410152E03Rik, 2810406L04Rik
Accession Numbers
Essential gene? Possibly non essential (E-score: 0.281) question?
Stock # IGL03295
Quality Score
Status
Chromosome 15
Chromosomal Location 72962261-72965924 bp(+) (GRCm39)
Type of Mutation intron
DNA Base Change (assembly) A to G at 72965445 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000120833 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000044113] [ENSMUST00000089765] [ENSMUST00000134353]
AlphaFold Q9JKP8
Predicted Effect probably benign
Transcript: ENSMUST00000044113
SMART Domains Protein: ENSMUSP00000042207
Gene: ENSMUSG00000036698

DomainStartEndE-ValueType
Pfam:ArgoN 29 167 1.7e-29 PFAM
DUF1785 176 228 2.98e-24 SMART
PAZ 236 371 3.11e-4 SMART
Pfam:ArgoL2 376 421 8.7e-16 PFAM
Pfam:ArgoMid 430 512 2.9e-35 PFAM
Piwi 518 819 1.36e-135 SMART
Predicted Effect unknown
Transcript: ENSMUST00000089765
AA Change: D116G
SMART Domains Protein: ENSMUSP00000087197
Gene: ENSMUSG00000068391
AA Change: D116G

DomainStartEndE-ValueType
Pfam:CBFD_NFYB_HMF 17 80 1.9e-15 PFAM
low complexity region 107 126 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000134353
SMART Domains Protein: ENSMUSP00000120833
Gene: ENSMUSG00000068391

DomainStartEndE-ValueType
Pfam:CBFD_NFYB_HMF 17 81 3.3e-16 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000137698
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] CHRAC1 is a histone-fold protein that interacts with other histone-fold proteins to bind DNA in a sequence-independent manner. These histone-fold protein dimers combine within larger enzymatic complexes for DNA transcription, replication, and packaging.[supplied by OMIM, Apr 2004]
Allele List at MGI
Other mutations in this stock
Total: 31 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
A930011G23Rik A T 5: 99,390,915 (GRCm39) probably benign Het
Adamts5 T C 16: 85,674,833 (GRCm39) T444A probably damaging Het
Aldh18a1 T C 19: 40,551,386 (GRCm39) E522G probably damaging Het
Bbx T C 16: 50,044,927 (GRCm39) T437A probably damaging Het
Bsx A G 9: 40,785,743 (GRCm39) probably benign Het
Cdc42bpa A G 1: 179,977,769 (GRCm39) N729S probably benign Het
Cdk1 G T 10: 69,178,373 (GRCm39) H162Q possibly damaging Het
Cip2a T C 16: 48,814,704 (GRCm39) S22P probably damaging Het
Ddx60 A T 8: 62,409,155 (GRCm39) D397V possibly damaging Het
Edn2 T A 4: 120,019,178 (GRCm39) C56S probably damaging Het
Gm4952 T C 19: 12,595,691 (GRCm39) V27A probably benign Het
Herc1 T A 9: 66,303,985 (GRCm39) S763T possibly damaging Het
Hspd1 G A 1: 55,119,334 (GRCm39) T381I probably benign Het
Krt1c T A 15: 101,724,864 (GRCm39) I249F probably damaging Het
Lman2l T C 1: 36,477,892 (GRCm39) D148G probably damaging Het
Lrp1b C T 2: 40,568,999 (GRCm39) probably null Het
Mier3 C A 13: 111,840,215 (GRCm39) T51K probably benign Het
Ppp1r36 C T 12: 76,485,192 (GRCm39) P305L probably damaging Het
Pramel27 G A 4: 143,579,759 (GRCm39) C448Y probably damaging Het
Prdm1 T C 10: 44,315,866 (GRCm39) I790V probably damaging Het
Sephs2 T C 7: 126,871,941 (GRCm39) E384G possibly damaging Het
Sipa1l1 T A 12: 82,479,714 (GRCm39) W1466R probably damaging Het
Snai2 T C 16: 14,524,638 (GRCm39) L48P possibly damaging Het
Stt3a A G 9: 36,674,627 (GRCm39) probably null Het
Synj1 T A 16: 90,735,318 (GRCm39) N1545I probably benign Het
Vav2 A T 2: 27,165,041 (GRCm39) S607T possibly damaging Het
Wdr27 T C 17: 15,154,837 (GRCm39) K27E possibly damaging Het
Xcl1 A T 1: 164,763,004 (GRCm39) V19E unknown Het
Xlr3c A T X: 72,301,240 (GRCm39) probably null Het
Zbtb44 T A 9: 30,964,753 (GRCm39) D54E probably benign Het
Zscan21 A G 5: 138,123,540 (GRCm39) D73G possibly damaging Het
Other mutations in Chrac1
AlleleSourceChrCoordTypePredicted EffectPPH Score
R0326:Chrac1 UTSW 15 72,964,675 (GRCm39) splice site probably null
R0389:Chrac1 UTSW 15 72,965,376 (GRCm39) missense possibly damaging 0.68
R1397:Chrac1 UTSW 15 72,962,293 (GRCm39) missense possibly damaging 0.95
Posted On 2016-08-02