Incidental Mutation 'IGL03079:Or4k6'
| ID |
417787 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Or4k6
|
| Ensembl Gene |
ENSMUSG00000048080 |
| Gene Name |
olfactory receptor family 4 subfamily K member 6 |
| Synonyms |
Olfr731, GA_x6K02T2PMLR-5936117-5935137, MOR246-5 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.072)
|
| Stock # |
IGL03079
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
14 |
| Chromosomal Location |
50475360-50476340 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to T
at 50475581 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Cysteine to Serine
at position 254
(C254S)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000150683
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000059565]
[ENSMUST00000214152]
[ENSMUST00000214388]
|
| AlphaFold |
F8VQB9 |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000059565
AA Change: C254S
PolyPhen 2
Score 0.815 (Sensitivity: 0.84; Specificity: 0.93)
|
| SMART Domains |
Protein: ENSMUSP00000050705
Gene: ENSMUSG00000048080
AA Change: C254S
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
305 |
8.5e-51 |
PFAM |
|
Pfam:7tm_1
|
41 |
287 |
5.5e-17 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000213322
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000214152
AA Change: C254S
PolyPhen 2
Score 0.815 (Sensitivity: 0.84; Specificity: 0.93)
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000214388
AA Change: C254S
PolyPhen 2
Score 0.815 (Sensitivity: 0.84; Specificity: 0.93)
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 27 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Alx1 |
T |
A |
10: 102,845,209 (GRCm39) |
H274L |
probably damaging |
Het |
| Arl6ip4 |
A |
T |
5: 124,254,990 (GRCm39) |
H59L |
possibly damaging |
Het |
| C1ra |
A |
G |
6: 124,496,794 (GRCm39) |
Y410C |
probably damaging |
Het |
| Ceacam11 |
A |
G |
7: 17,712,361 (GRCm39) |
N270S |
probably benign |
Het |
| Cmtr1 |
T |
A |
17: 29,882,267 (GRCm39) |
N39K |
possibly damaging |
Het |
| Cmya5 |
T |
C |
13: 93,234,209 (GRCm39) |
D293G |
possibly damaging |
Het |
| Cyp2d11 |
T |
C |
15: 82,275,167 (GRCm39) |
E260G |
probably damaging |
Het |
| Dnajc13 |
C |
T |
9: 104,090,068 (GRCm39) |
W700* |
probably null |
Het |
| Efemp2 |
G |
T |
19: 5,525,155 (GRCm39) |
L20F |
probably damaging |
Het |
| Hars1 |
G |
A |
18: 36,903,556 (GRCm39) |
L289F |
probably damaging |
Het |
| Hdlbp |
A |
G |
1: 93,341,662 (GRCm39) |
|
probably benign |
Het |
| Iqgap3 |
A |
T |
3: 88,020,477 (GRCm39) |
M374L |
probably benign |
Het |
| Lrig2 |
A |
T |
3: 104,398,287 (GRCm39) |
W281R |
probably damaging |
Het |
| Lyg2 |
C |
T |
1: 37,946,727 (GRCm39) |
E185K |
possibly damaging |
Het |
| Maml2 |
A |
G |
9: 13,532,912 (GRCm39) |
|
probably benign |
Het |
| Marchf11 |
T |
C |
15: 26,311,144 (GRCm39) |
S207P |
probably damaging |
Het |
| Nipa2 |
A |
T |
7: 55,583,205 (GRCm39) |
V180E |
probably damaging |
Het |
| P2rx5 |
A |
G |
11: 73,055,714 (GRCm39) |
D57G |
possibly damaging |
Het |
| Pxdn |
T |
C |
12: 30,052,997 (GRCm39) |
I1058T |
probably damaging |
Het |
| Rxfp3 |
C |
A |
15: 11,036,909 (GRCm39) |
M154I |
possibly damaging |
Het |
| Slc3a1 |
T |
A |
17: 85,367,251 (GRCm39) |
Y479* |
probably null |
Het |
| Tamalin |
T |
C |
15: 101,128,448 (GRCm39) |
V162A |
probably damaging |
Het |
| Tecrl |
G |
A |
5: 83,442,447 (GRCm39) |
H209Y |
probably damaging |
Het |
| Ttll5 |
T |
C |
12: 85,923,332 (GRCm39) |
Y270H |
probably damaging |
Het |
| Usp34 |
A |
G |
11: 23,382,247 (GRCm39) |
E1986G |
possibly damaging |
Het |
| Zfp719 |
A |
G |
7: 43,240,590 (GRCm39) |
Y726C |
probably damaging |
Het |
| Zfp810 |
T |
C |
9: 22,195,423 (GRCm39) |
E7G |
probably damaging |
Het |
|
| Other mutations in Or4k6 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01488:Or4k6
|
APN |
14 |
50,475,595 (GRCm39) |
missense |
possibly damaging |
0.87 |
|
IGL02304:Or4k6
|
APN |
14 |
50,476,217 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02395:Or4k6
|
APN |
14 |
50,475,886 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0646:Or4k6
|
UTSW |
14 |
50,476,096 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1253:Or4k6
|
UTSW |
14 |
50,475,581 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2027:Or4k6
|
UTSW |
14 |
50,475,406 (GRCm39) |
missense |
probably benign |
|
|
R2364:Or4k6
|
UTSW |
14 |
50,475,612 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4714:Or4k6
|
UTSW |
14 |
50,475,824 (GRCm39) |
missense |
possibly damaging |
0.68 |
|
R4749:Or4k6
|
UTSW |
14 |
50,476,190 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R5880:Or4k6
|
UTSW |
14 |
50,476,172 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R6954:Or4k6
|
UTSW |
14 |
50,475,567 (GRCm39) |
nonsense |
probably null |
|
|
R7295:Or4k6
|
UTSW |
14 |
50,476,073 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R7419:Or4k6
|
UTSW |
14 |
50,475,448 (GRCm39) |
missense |
possibly damaging |
0.85 |
|
R7457:Or4k6
|
UTSW |
14 |
50,475,825 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R8806:Or4k6
|
UTSW |
14 |
50,475,376 (GRCm39) |
missense |
probably benign |
0.09 |
|
R9350:Or4k6
|
UTSW |
14 |
50,475,407 (GRCm39) |
missense |
probably benign |
|
|
R9446:Or4k6
|
UTSW |
14 |
50,475,974 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Posted On |
2016-08-02 |
Incidental Mutation