Incidental Mutation 'IGL03112:Lclat1'
ID419232
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Lclat1
Ensembl Gene ENSMUSG00000054469
Gene Namelysocardiolipin acyltransferase 1
SynonymsLycat, AGPAT8, ALCAT1
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.103) question?
Stock #IGL03112
Quality Score
Status
Chromosome17
Chromosomal Location73107985-73243368 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) A to T at 73239747 bp
ZygosityHeterozygous
Amino Acid Change Threonine to Serine at position 220 (T220S)
Ref Sequence ENSEMBL: ENSMUSP00000068690 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000067545]
Predicted Effect probably damaging
Transcript: ENSMUST00000067545
AA Change: T220S

PolyPhen 2 Score 0.996 (Sensitivity: 0.55; Specificity: 0.98)
SMART Domains Protein: ENSMUSP00000068690
Gene: ENSMUSG00000054469
AA Change: T220S

DomainStartEndE-ValueType
transmembrane domain 9 31 N/A INTRINSIC
PlsC 79 201 8.7e-15 SMART
Pfam:Acyltransf_C 232 315 1e-20 PFAM
transmembrane domain 334 356 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000131335
Predicted Effect noncoding transcript
Transcript: ENSMUST00000134149
Coding Region Coverage
Validation Efficiency
MGI Phenotype PHENOTYPE: Male mice homozygous for a knock-out allele and fed a high fat diet exhibit resistance to diet induced obesity, decreased total body fat, increased insulin sensitivity, polyphagia, hyperactivity, increased energy expenditure, and increased fatty acid oxidation. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 39 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adam26b T C 8: 43,521,512 N151S probably benign Het
Adgre1 G A 17: 57,448,029 probably null Het
AI481877 G T 4: 59,049,355 Q1069K probably benign Het
Apol11a T A 15: 77,517,309 L332Q probably damaging Het
B430306N03Rik C T 17: 48,316,806 S45L probably benign Het
Cend1 G A 7: 141,427,727 T60M probably benign Het
Col6a3 C A 1: 90,811,520 E329* probably null Het
Col9a3 A G 2: 180,607,642 R266G possibly damaging Het
Defb48 C T 14: 62,984,405 probably benign Het
Eps8l2 T G 7: 141,361,736 L640R probably damaging Het
Exoc2 T A 13: 30,906,587 probably benign Het
Fam149a C T 8: 45,348,543 V514M possibly damaging Het
Fbxo25 A T 8: 13,921,034 D74V probably benign Het
Gm11733 A G 11: 117,487,140 *126W probably null Het
Grm8 C T 6: 27,363,263 C751Y probably damaging Het
Kctd16 A T 18: 40,258,800 D147V probably benign Het
Lgi1 T A 19: 38,284,030 H116Q possibly damaging Het
Lrrc40 G A 3: 158,041,665 probably benign Het
Lsm4 T A 8: 70,678,006 I60N probably damaging Het
Morn1 T A 4: 155,093,144 Y178N probably damaging Het
Mybl2 A G 2: 163,062,536 E89G probably damaging Het
Myo18b T C 5: 112,873,990 E512G probably benign Het
Myrfl A T 10: 116,803,406 S583T probably benign Het
Nek6 A G 2: 38,560,902 I106V probably damaging Het
Oas1a A T 5: 120,898,349 D338E possibly damaging Het
Olfr1113 T A 2: 87,213,600 I236N probably damaging Het
Olfr1249 G A 2: 89,630,334 T188I probably benign Het
Olfr802 A G 10: 129,681,923 V272A probably benign Het
Pitrm1 C A 13: 6,565,008 Q508K probably benign Het
S100b A G 10: 76,259,974 D62G probably damaging Het
Sesn3 A G 9: 14,310,261 H119R probably damaging Het
Sez6l T A 5: 112,473,467 E247V probably damaging Het
Shq1 C A 6: 100,573,613 E455* probably null Het
Slc9b1 T A 3: 135,397,672 M521K probably damaging Het
Supt16 A G 14: 52,176,398 F543L probably damaging Het
Tcf25 T C 8: 123,382,519 probably benign Het
Usp48 C A 4: 137,608,064 Q183K probably damaging Het
Vmn1r178 G A 7: 23,893,661 G45S probably damaging Het
Vmn1r237 T A 17: 21,314,106 Y30* probably null Het
Other mutations in Lclat1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02616:Lclat1 APN 17 73169533 missense probably benign 0.35
R0270:Lclat1 UTSW 17 73240027 missense probably benign 0.33
R1661:Lclat1 UTSW 17 73188004 missense probably damaging 1.00
R1665:Lclat1 UTSW 17 73188004 missense probably damaging 1.00
R1674:Lclat1 UTSW 17 73239781 missense probably damaging 1.00
R1678:Lclat1 UTSW 17 73196720 missense probably damaging 0.97
R4785:Lclat1 UTSW 17 73240070 nonsense probably null
R5458:Lclat1 UTSW 17 73239919 missense probably damaging 1.00
R6455:Lclat1 UTSW 17 73161833 missense probably damaging 0.99
R7063:Lclat1 UTSW 17 73239991 missense possibly damaging 0.58
X0028:Lclat1 UTSW 17 73169518 missense probably damaging 1.00
Posted On2016-08-02