Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL03350:Clec2m'

419648

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Clec2m

Ensembl Gene

ENSMUSG00000047720

Gene Name

C-type lectin domain family 2, member m

Synonyms

4922502D21Rik

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.049) question?

Stock #

IGL03350

Quality Score

Status

Chromosome

Chromosomal Location

129299127-129308759 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

C to A at 129307986 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Valine to Leucine at position 28 (V28L)

Ref Sequence

ENSEMBL: ENSMUSP00000062024 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000051283]

AlphaFold

Q8C634

Predicted Effect

probably benign
Transcript: ENSMUST00000051283
AA Change: V28L

PolyPhen 2 Score 0.069 (Sensitivity: 0.94; Specificity: 0.84)

SMART Domains

Protein: ENSMUSP00000062024
Gene: ENSMUSG00000047720
AA Change: V28L

Domain	Start	End	E-Value	Type
low complexity region	31	44	N/A	INTRINSIC
CLECT	71	183	1.32e-19	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000203159

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 45 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adam26a	A	T	8: 44,022,589 (GRCm39)	Y300*	probably null	Het
Adgre1	T	A	17: 57,708,908 (GRCm39)	V33E	probably benign	Het
AI987944	A	G	7: 41,042,661 (GRCm39)		probably benign	Het
Atp4a	T	C	7: 30,420,292 (GRCm39)	L813P	probably damaging	Het
Blmh	A	G	11: 76,862,774 (GRCm39)	N396D	probably damaging	Het
Brat1	T	C	5: 140,691,750 (GRCm39)	L9P	probably damaging	Het
Ccdc171	T	C	4: 83,599,615 (GRCm39)	I810T	possibly damaging	Het
Cyp2a22	T	C	7: 26,634,279 (GRCm39)	T292A	possibly damaging	Het
Ecm2	C	T	13: 49,674,420 (GRCm39)	T280I	probably benign	Het
Fa2h	C	T	8: 112,075,928 (GRCm39)	V232I	probably benign	Het
Fbxw24	T	C	9: 109,436,081 (GRCm39)	D317G	probably damaging	Het
Flt4	C	A	11: 49,525,620 (GRCm39)	S722*	probably null	Het
Fryl	T	C	5: 73,290,649 (GRCm39)	Q85R	probably damaging	Het
Gm3239	A	G	14: 15,882,083 (GRCm39)	R188G	possibly damaging	Het
Hspa13	A	T	16: 75,554,717 (GRCm39)	S456R	probably damaging	Het
Htr1b	T	C	9: 81,514,175 (GRCm39)	Y144C	probably damaging	Het
Hydin	A	G	8: 111,038,856 (GRCm39)	H198R	possibly damaging	Het
Krt78	A	T	15: 101,854,952 (GRCm39)	M953K	probably benign	Het
Lgr5	G	T	10: 115,307,893 (GRCm39)	T255K	probably damaging	Het
Lrp2	T	A	2: 69,268,797 (GRCm39)	D4162V	probably damaging	Het
Map3k2	A	G	18: 32,345,201 (GRCm39)	D342G	probably damaging	Het
Miip	A	G	4: 147,946,979 (GRCm39)	V258A	probably benign	Het
Muc6	T	C	7: 141,238,324 (GRCm39)	H52R	probably damaging	Het
Nfs1	T	C	2: 155,969,660 (GRCm39)	E329G	probably benign	Het
Npsr1	T	C	9: 24,009,605 (GRCm39)	V37A	probably benign	Het
Or1ak2	T	C	2: 36,827,595 (GRCm39)	Y155H	probably damaging	Het
Or1e17	A	T	11: 73,831,664 (GRCm39)	L197F	probably damaging	Het
Or5aq1b	A	C	2: 86,901,904 (GRCm39)	D191E	probably damaging	Het
Pex16	T	A	2: 92,207,842 (GRCm39)	M98K	probably damaging	Het
Pla2r1	C	T	2: 60,285,517 (GRCm39)	C699Y	probably damaging	Het
Plcd4	A	T	1: 74,588,460 (GRCm39)	D103V	probably damaging	Het
Pnpla1	A	G	17: 29,095,966 (GRCm39)	D129G	probably damaging	Het
Rad23a	T	C	8: 85,564,108 (GRCm39)	E265G	possibly damaging	Het
Rbm11	C	T	16: 75,397,696 (GRCm39)	P209S	probably benign	Het
Ribc2	T	A	15: 85,019,703 (GRCm39)	W162R	probably damaging	Het
Rnf4	A	G	5: 34,504,204 (GRCm39)	E32G	possibly damaging	Het
Rpe65	A	T	3: 159,320,154 (GRCm39)	S269C	possibly damaging	Het
Slc7a14	T	A	3: 31,291,558 (GRCm39)	Y240F	probably benign	Het
Sorbs2	C	T	8: 46,258,844 (GRCm39)	P1047L	probably damaging	Het
Ttn	T	C	2: 76,580,166 (GRCm39)	I23576V	probably damaging	Het
Usp24	T	G	4: 106,228,276 (GRCm39)	Y780*	probably null	Het
Wee2	T	C	6: 40,426,665 (GRCm39)	S145P	probably damaging	Het
Zcchc7	A	G	4: 44,931,188 (GRCm39)	T126A	probably benign	Het
Zpld1	A	G	16: 55,061,692 (GRCm39)		probably benign	Het
Zup1	G	A	10: 33,804,107 (GRCm39)	R456C	probably benign	Het

Other mutations in Clec2m

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02053:Clec2m	APN	6	129,303,725 (GRCm39)	missense	probably benign	0.00
IGL02298:Clec2m	APN	6	129,308,527 (GRCm39)	start codon destroyed	probably benign	0.09
R0178:Clec2m	UTSW	6	129,303,786 (GRCm39)	missense	probably benign	0.01
R0270:Clec2m	UTSW	6	129,302,571 (GRCm39)	nonsense	probably null
R0414:Clec2m	UTSW	6	129,303,813 (GRCm39)	unclassified	probably benign
R0648:Clec2m	UTSW	6	129,307,932 (GRCm39)	missense	probably benign	0.03
R1065:Clec2m	UTSW	6	129,300,013 (GRCm39)	missense	possibly damaging	0.83
R2075:Clec2m	UTSW	6	129,303,666 (GRCm39)	missense	probably benign	0.01
R6163:Clec2m	UTSW	6	129,303,710 (GRCm39)	missense	probably benign	0.00
R7092:Clec2m	UTSW	6	129,299,963 (GRCm39)	missense	probably benign	0.12
R7107:Clec2m	UTSW	6	129,299,915 (GRCm39)	missense	probably damaging	1.00
R7360:Clec2m	UTSW	6	129,303,710 (GRCm39)	missense	probably benign	0.00
R7369:Clec2m	UTSW	6	129,308,496 (GRCm39)	missense	possibly damaging	0.68
R7414:Clec2m	UTSW	6	129,302,596 (GRCm39)	missense	probably benign	0.17
R7937:Clec2m	UTSW	6	129,307,974 (GRCm39)	missense	possibly damaging	0.84
R8345:Clec2m	UTSW	6	129,302,593 (GRCm39)	missense	probably damaging	1.00
R8402:Clec2m	UTSW	6	129,300,007 (GRCm39)	missense	possibly damaging	0.94
R8814:Clec2m	UTSW	6	129,302,567 (GRCm39)	intron	probably benign
R8862:Clec2m	UTSW	6	129,308,494 (GRCm39)	missense	probably benign	0.00
X0026:Clec2m	UTSW	6	129,303,656 (GRCm39)	missense	probably benign	0.03

Posted On

2016-08-02