Incidental Mutation 'IGL03381:Wdcp'
ID 420708
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Wdcp
Ensembl Gene ENSMUSG00000051721
Gene Name WD repeat and coiled coil containing
Synonyms BC068281
Accession Numbers
Essential gene? Possibly essential (E-score: 0.707) question?
Stock # IGL03381
Quality Score
Status
Chromosome 12
Chromosomal Location 4893303-4910043 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 4901926 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Valine to Aspartic acid at position 594 (V594D)
Ref Sequence ENSEMBL: ENSMUSP00000152571 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000053034] [ENSMUST00000085793] [ENSMUST00000220170] [ENSMUST00000220215] [ENSMUST00000223551]
AlphaFold Q6NV72
Predicted Effect probably damaging
Transcript: ENSMUST00000053034
AA Change: V594D

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000054102
Gene: ENSMUSG00000051721
AA Change: V594D

DomainStartEndE-ValueType
Pfam:DUF4613 2 610 1.9e-260 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000085793
AA Change: V594D

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000082948
Gene: ENSMUSG00000051721
AA Change: V594D

DomainStartEndE-ValueType
Pfam:DUF4613 2 643 2.4e-280 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000219069
Predicted Effect probably benign
Transcript: ENSMUST00000220170
Predicted Effect probably damaging
Transcript: ENSMUST00000220215
AA Change: V594D

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
Predicted Effect probably damaging
Transcript: ENSMUST00000223551
AA Change: V594D

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 39 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
A330017A19Rik T C 17: 47,200,812 (GRCm39) probably benign Het
Abca16 T C 7: 120,127,041 (GRCm39) F1243S probably benign Het
Adgrv1 A G 13: 81,666,086 (GRCm39) V1990A probably damaging Het
Arhgdib G A 6: 136,909,314 (GRCm39) T69I probably benign Het
Atf2 G A 2: 73,659,012 (GRCm39) A214V probably benign Het
Ccr2 G A 9: 123,906,409 (GRCm39) V230I probably benign Het
Cnksr1 T C 4: 133,959,482 (GRCm39) E384G probably damaging Het
Epha5 T A 5: 84,479,191 (GRCm39) D271V probably damaging Het
Fut2 C T 7: 45,300,193 (GRCm39) G193E possibly damaging Het
Gpr15 A G 16: 58,538,339 (GRCm39) F250S probably damaging Het
Gzmf A T 14: 56,444,450 (GRCm39) V41E probably benign Het
H2-T10 C T 17: 36,430,246 (GRCm39) D232N probably benign Het
H2-T10 T A 17: 36,430,249 (GRCm39) K231* probably null Het
Hsd3b6 A G 3: 98,715,128 (GRCm39) V88A possibly damaging Het
Kit C T 5: 75,767,788 (GRCm39) T57M probably benign Het
Klhl22 A G 16: 17,610,591 (GRCm39) D614G possibly damaging Het
Matr3 T A 18: 35,712,078 (GRCm39) probably benign Het
Mff A G 1: 82,719,661 (GRCm39) Y213C probably damaging Het
Mrnip A G 11: 50,090,417 (GRCm39) T194A probably benign Het
Msh6 T C 17: 88,292,537 (GRCm39) F431L probably damaging Het
Mttp G A 3: 137,810,704 (GRCm39) R637C probably damaging Het
Nlrc3 A G 16: 3,782,179 (GRCm39) V410A probably benign Het
Or4c120 A G 2: 89,001,523 (GRCm39) I11T possibly damaging Het
Or52a5b T C 7: 103,417,044 (GRCm39) I187V probably benign Het
Or5b108 T A 19: 13,168,769 (GRCm39) V246D probably damaging Het
Pramel21 T C 4: 143,343,625 (GRCm39) probably benign Het
Psip1 T C 4: 83,404,022 (GRCm39) T2A probably benign Het
Rbm33 T C 5: 28,599,390 (GRCm39) F921L unknown Het
Rhbdl2 T C 4: 123,716,610 (GRCm39) V189A possibly damaging Het
Rpap2 C T 5: 107,768,067 (GRCm39) P302S probably benign Het
Sec23ip T A 7: 128,352,029 (GRCm39) V32D probably damaging Het
Sh3yl1 T C 12: 30,976,836 (GRCm39) I47T possibly damaging Het
Spmip4 T C 6: 50,566,116 (GRCm39) S120G probably damaging Het
Tenm2 A C 11: 35,959,238 (GRCm39) S1104A probably benign Het
Ufd1 A G 16: 18,644,507 (GRCm39) D190G probably damaging Het
Ugt1a7c T C 1: 88,023,512 (GRCm39) F224L probably benign Het
Utp20 G T 10: 88,657,867 (GRCm39) F64L probably damaging Het
Vmn1r198 A G 13: 22,539,006 (GRCm39) Y164C probably benign Het
Xirp2 A C 2: 67,344,570 (GRCm39) E2270D probably benign Het
Other mutations in Wdcp
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00770:Wdcp APN 12 4,905,303 (GRCm39) missense probably damaging 1.00
IGL00774:Wdcp APN 12 4,905,303 (GRCm39) missense probably damaging 1.00
IGL02327:Wdcp APN 12 4,901,115 (GRCm39) missense possibly damaging 0.95
IGL02725:Wdcp APN 12 4,901,206 (GRCm39) missense probably damaging 1.00
IGL03377:Wdcp APN 12 4,900,691 (GRCm39) nonsense probably null
R0152:Wdcp UTSW 12 4,901,583 (GRCm39) missense probably benign 0.06
R0317:Wdcp UTSW 12 4,901,583 (GRCm39) missense probably benign 0.06
R1077:Wdcp UTSW 12 4,900,685 (GRCm39) missense probably damaging 1.00
R1136:Wdcp UTSW 12 4,901,655 (GRCm39) missense possibly damaging 0.78
R1571:Wdcp UTSW 12 4,901,924 (GRCm39) nonsense probably null
R1653:Wdcp UTSW 12 4,901,815 (GRCm39) missense probably damaging 1.00
R1848:Wdcp UTSW 12 4,900,245 (GRCm39) missense possibly damaging 0.86
R4091:Wdcp UTSW 12 4,905,279 (GRCm39) missense probably null 0.00
R5126:Wdcp UTSW 12 4,900,617 (GRCm39) missense probably damaging 0.98
R6148:Wdcp UTSW 12 4,900,621 (GRCm39) missense possibly damaging 0.74
R6529:Wdcp UTSW 12 4,901,143 (GRCm39) missense probably damaging 1.00
R6800:Wdcp UTSW 12 4,901,358 (GRCm39) missense probably damaging 1.00
R7432:Wdcp UTSW 12 4,900,246 (GRCm39) missense probably damaging 1.00
R7821:Wdcp UTSW 12 4,907,975 (GRCm39) missense probably benign 0.07
R8182:Wdcp UTSW 12 4,901,850 (GRCm39) missense probably damaging 1.00
R8553:Wdcp UTSW 12 4,902,024 (GRCm39) intron probably benign
R8845:Wdcp UTSW 12 4,901,439 (GRCm39) missense probably benign 0.26
R9134:Wdcp UTSW 12 4,901,533 (GRCm39) nonsense probably null
R9609:Wdcp UTSW 12 4,900,258 (GRCm39) missense probably damaging 0.98
U24488:Wdcp UTSW 12 4,900,405 (GRCm39) missense probably damaging 1.00
X0026:Wdcp UTSW 12 4,901,077 (GRCm39) nonsense probably null
Z1088:Wdcp UTSW 12 4,900,825 (GRCm39) missense probably damaging 1.00
Z1176:Wdcp UTSW 12 4,901,785 (GRCm39) missense possibly damaging 0.95
Posted On 2016-08-02