Incidental Mutation 'R5288:Loxhd1'
ID |
424556 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Loxhd1
|
Ensembl Gene |
ENSMUSG00000032818 |
Gene Name |
lipoxygenase homology domains 1 |
Synonyms |
1700096C21Rik, sba |
MMRRC Submission |
042842-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.163)
|
Stock # |
R5288 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
18 |
Chromosomal Location |
77369654-77530626 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to C
at 77451308 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Aspartic acid to Alanine
at position 410
(D410A)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000114988
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000035501]
[ENSMUST00000096547]
[ENSMUST00000148341]
|
AlphaFold |
C8YR32 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000035501
AA Change: D496A
PolyPhen 2
Score 0.005 (Sensitivity: 0.97; Specificity: 0.74)
|
SMART Domains |
Protein: ENSMUSP00000045450 Gene: ENSMUSG00000032818 AA Change: D496A
Domain | Start | End | E-Value | Type |
Pfam:PLAT
|
1 |
53 |
3.2e-7 |
PFAM |
LH2
|
63 |
176 |
1.1e-4 |
SMART |
LH2
|
192 |
306 |
4.02e-4 |
SMART |
LH2
|
320 |
442 |
3.79e-6 |
SMART |
LH2
|
451 |
567 |
5.92e-6 |
SMART |
LH2
|
581 |
696 |
7.67e-3 |
SMART |
LH2
|
793 |
913 |
1.47e-11 |
SMART |
low complexity region
|
922 |
931 |
N/A |
INTRINSIC |
SCOP:d1lox_2
|
949 |
974 |
1e-4 |
SMART |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000096547
AA Change: D729A
PolyPhen 2
Score 0.966 (Sensitivity: 0.77; Specificity: 0.95)
|
SMART Domains |
Protein: ENSMUSP00000094294 Gene: ENSMUSG00000032818 AA Change: D729A
Domain | Start | End | E-Value | Type |
LH2
|
43 |
158 |
5.64e-5 |
SMART |
LH2
|
172 |
290 |
1.64e-9 |
SMART |
LH2
|
296 |
409 |
1.1e-4 |
SMART |
LH2
|
425 |
539 |
4.02e-4 |
SMART |
LH2
|
553 |
675 |
3.79e-6 |
SMART |
LH2
|
684 |
800 |
5.92e-6 |
SMART |
LH2
|
814 |
936 |
6.91e-8 |
SMART |
low complexity region
|
945 |
954 |
N/A |
INTRINSIC |
LH2
|
970 |
1086 |
4.81e-7 |
SMART |
LH2
|
1101 |
1228 |
5.73e-3 |
SMART |
LH2
|
1255 |
1375 |
8.82e-5 |
SMART |
Pfam:PLAT
|
1424 |
1540 |
5.4e-10 |
PFAM |
LH2
|
1553 |
1666 |
6.41e-3 |
SMART |
LH2
|
1680 |
1799 |
6.76e-6 |
SMART |
Pfam:PLAT
|
1813 |
1929 |
3.8e-9 |
PFAM |
LH2
|
1949 |
2067 |
7.23e-11 |
SMART |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000148341
AA Change: D410A
PolyPhen 2
Score 0.995 (Sensitivity: 0.68; Specificity: 0.97)
|
SMART Domains |
Protein: ENSMUSP00000114988 Gene: ENSMUSG00000032818 AA Change: D410A
Domain | Start | End | E-Value | Type |
Pfam:PLAT
|
1 |
91 |
1.7e-11 |
PFAM |
LH2
|
106 |
220 |
4.02e-4 |
SMART |
LH2
|
234 |
356 |
3.79e-6 |
SMART |
LH2
|
365 |
481 |
5.92e-6 |
SMART |
LH2
|
495 |
610 |
7.67e-3 |
SMART |
LH2
|
707 |
827 |
1.47e-11 |
SMART |
low complexity region
|
836 |
845 |
N/A |
INTRINSIC |
LH2
|
861 |
977 |
4.81e-7 |
SMART |
LH2
|
992 |
1119 |
5.73e-3 |
SMART |
LH2
|
1146 |
1266 |
8.82e-5 |
SMART |
Pfam:PLAT
|
1384 |
1469 |
8.9e-14 |
PFAM |
|
Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.5%
- 10x: 97.1%
- 20x: 94.7%
|
Validation Efficiency |
|
MGI Phenotype |
PHENOTYPE: Mice honozygous for an ENU-induced mutation exhibit hearing loss associated with hair cell and spiral ganglion degeneration. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 113 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Abcc12 |
A |
T |
8: 87,293,168 (GRCm39) |
Y7N |
probably damaging |
Het |
Adcy1 |
A |
C |
11: 7,111,351 (GRCm39) |
I881L |
probably benign |
Het |
Aftph |
T |
C |
11: 20,676,994 (GRCm39) |
D205G |
probably damaging |
Het |
Aldh7a1 |
T |
A |
18: 56,667,325 (GRCm39) |
N316Y |
possibly damaging |
Het |
Ankrd36 |
A |
G |
11: 5,639,340 (GRCm39) |
|
probably benign |
Het |
Ccdc88a |
T |
G |
11: 29,448,416 (GRCm39) |
N1465K |
possibly damaging |
Het |
Ccpg1 |
G |
A |
9: 72,920,326 (GRCm39) |
S647N |
probably benign |
Het |
Cep70 |
T |
A |
9: 99,163,128 (GRCm39) |
L325Q |
probably damaging |
Het |
Cfap46 |
A |
G |
7: 139,193,423 (GRCm39) |
|
probably null |
Het |
Cftr |
C |
T |
6: 18,226,128 (GRCm39) |
Q359* |
probably null |
Het |
Chrne |
A |
T |
11: 70,505,913 (GRCm39) |
N457K |
possibly damaging |
Het |
Cntn2 |
A |
G |
1: 132,451,415 (GRCm39) |
I438T |
probably benign |
Het |
Cntn4 |
T |
C |
6: 106,158,765 (GRCm39) |
L10P |
possibly damaging |
Het |
Copg1 |
G |
T |
6: 87,867,189 (GRCm39) |
M87I |
possibly damaging |
Het |
Cyfip1 |
A |
T |
7: 55,574,883 (GRCm39) |
M1045L |
possibly damaging |
Het |
Cyp2c29 |
C |
T |
19: 39,318,816 (GRCm39) |
P432L |
probably damaging |
Het |
Dcaf11 |
T |
A |
14: 55,800,833 (GRCm39) |
D96E |
probably damaging |
Het |
Dmxl2 |
A |
G |
9: 54,286,041 (GRCm39) |
S2715P |
probably benign |
Het |
Dnhd1 |
G |
A |
7: 105,363,644 (GRCm39) |
E4069K |
possibly damaging |
Het |
Dpy19l4 |
T |
A |
4: 11,289,721 (GRCm39) |
N330I |
probably damaging |
Het |
Dpy19l4 |
G |
T |
4: 11,304,014 (GRCm39) |
A132D |
probably damaging |
Het |
Duox2 |
A |
G |
2: 122,125,617 (GRCm39) |
V330A |
probably benign |
Het |
Dusp11 |
T |
C |
6: 85,924,587 (GRCm39) |
*322W |
probably null |
Het |
Dusp8 |
T |
A |
7: 141,643,730 (GRCm39) |
Q61L |
possibly damaging |
Het |
Eml3 |
G |
A |
19: 8,916,638 (GRCm39) |
G720S |
probably damaging |
Het |
F11 |
A |
G |
8: 45,699,833 (GRCm39) |
S418P |
probably damaging |
Het |
Fam91a1 |
G |
A |
15: 58,320,243 (GRCm39) |
S645N |
probably benign |
Het |
Fat2 |
G |
A |
11: 55,158,482 (GRCm39) |
T3412I |
probably benign |
Het |
Fbxo38 |
A |
G |
18: 62,674,042 (GRCm39) |
M13T |
probably benign |
Het |
Fbxo48 |
G |
T |
11: 16,904,329 (GRCm39) |
L160F |
possibly damaging |
Het |
Gm10134 |
T |
A |
2: 28,396,372 (GRCm39) |
|
probably benign |
Het |
Gm11787 |
T |
C |
4: 3,511,795 (GRCm39) |
|
noncoding transcript |
Het |
Gpatch8 |
A |
T |
11: 102,399,053 (GRCm39) |
|
probably null |
Het |
Gucy2g |
G |
A |
19: 55,203,548 (GRCm39) |
A750V |
probably damaging |
Het |
Hephl1 |
T |
C |
9: 14,988,150 (GRCm39) |
T653A |
possibly damaging |
Het |
Herc3 |
T |
A |
6: 58,851,263 (GRCm39) |
M504K |
probably damaging |
Het |
Hmcn2 |
A |
G |
2: 31,350,333 (GRCm39) |
T5077A |
probably benign |
Het |
Ifitm3 |
T |
C |
7: 140,590,554 (GRCm39) |
N2S |
probably benign |
Het |
Ighe |
T |
C |
12: 113,235,092 (GRCm39) |
H356R |
probably benign |
Het |
Ighv10-3 |
T |
A |
12: 114,487,125 (GRCm39) |
M99L |
probably benign |
Het |
Izumo4 |
C |
A |
10: 80,538,639 (GRCm39) |
C30* |
probably null |
Het |
Jag1 |
A |
T |
2: 136,937,464 (GRCm39) |
H303Q |
possibly damaging |
Het |
Kif24 |
T |
C |
4: 41,395,373 (GRCm39) |
E500G |
probably benign |
Het |
Kng1 |
A |
T |
16: 22,897,842 (GRCm39) |
D414V |
probably damaging |
Het |
Ltn1 |
T |
C |
16: 87,212,899 (GRCm39) |
K554R |
possibly damaging |
Het |
Ly75 |
A |
G |
2: 60,133,985 (GRCm39) |
C1547R |
probably damaging |
Het |
Ms4a6d |
A |
T |
19: 11,564,500 (GRCm39) |
S124T |
possibly damaging |
Het |
Mtcl3 |
A |
G |
10: 29,072,766 (GRCm39) |
D686G |
probably benign |
Het |
Mtfr2 |
A |
G |
10: 20,233,448 (GRCm39) |
D339G |
probably damaging |
Het |
Myh10 |
T |
A |
11: 68,692,434 (GRCm39) |
L1369Q |
probably damaging |
Het |
Myh11 |
A |
T |
16: 14,025,872 (GRCm39) |
V1366D |
possibly damaging |
Het |
Nadsyn1 |
A |
G |
7: 143,357,023 (GRCm39) |
V491A |
possibly damaging |
Het |
Nav3 |
T |
C |
10: 109,688,966 (GRCm39) |
N437S |
probably benign |
Het |
Ncf1 |
A |
G |
5: 134,250,659 (GRCm39) |
L373P |
probably damaging |
Het |
Neb |
A |
T |
2: 52,079,873 (GRCm39) |
I85N |
probably damaging |
Het |
Nktr |
A |
G |
9: 121,577,659 (GRCm39) |
K576E |
probably benign |
Het |
Nmur2 |
T |
A |
11: 55,931,040 (GRCm39) |
I224F |
probably damaging |
Het |
Oas3 |
A |
G |
5: 120,895,055 (GRCm39) |
F978S |
probably damaging |
Het |
Or10ag53 |
C |
T |
2: 87,082,827 (GRCm39) |
P182L |
probably benign |
Het |
Or10ak9 |
T |
C |
4: 118,726,772 (GRCm39) |
S264P |
probably damaging |
Het |
Or2r3 |
T |
A |
6: 42,448,186 (GRCm39) |
I309F |
probably benign |
Het |
Or2t48 |
A |
T |
11: 58,420,308 (GRCm39) |
M168K |
probably damaging |
Het |
Or5p60 |
T |
C |
7: 107,724,375 (GRCm39) |
T32A |
probably benign |
Het |
Pcyox1 |
A |
T |
6: 86,369,336 (GRCm39) |
|
probably null |
Het |
Pdcd7 |
G |
A |
9: 65,265,974 (GRCm39) |
W477* |
probably null |
Het |
Pitpnm1 |
T |
C |
19: 4,153,435 (GRCm39) |
F197S |
probably damaging |
Het |
Plce1 |
C |
A |
19: 38,748,535 (GRCm39) |
N1755K |
probably damaging |
Het |
Pnpla7 |
C |
A |
2: 24,931,031 (GRCm39) |
P882Q |
probably damaging |
Het |
Pold2 |
A |
G |
11: 5,826,760 (GRCm39) |
L58P |
probably damaging |
Het |
Pomt1 |
C |
G |
2: 32,134,311 (GRCm39) |
Y277* |
probably null |
Het |
Pou4f2 |
A |
G |
8: 79,162,958 (GRCm39) |
Y26H |
unknown |
Het |
Pphln1-ps1 |
T |
G |
16: 13,495,622 (GRCm39) |
N240K |
probably benign |
Het |
Ppm1e |
A |
T |
11: 87,249,377 (GRCm39) |
L118Q |
possibly damaging |
Het |
Pramel34 |
C |
T |
5: 93,785,607 (GRCm39) |
M224I |
possibly damaging |
Het |
Prdx2 |
T |
A |
8: 85,698,302 (GRCm39) |
Y164* |
probably null |
Het |
Prkra |
T |
G |
2: 76,469,622 (GRCm39) |
T146P |
probably damaging |
Het |
Prpf8 |
A |
G |
11: 75,386,625 (GRCm39) |
D1038G |
probably damaging |
Het |
Rab4a |
A |
T |
8: 124,554,113 (GRCm39) |
I16L |
probably benign |
Het |
Rai2 |
A |
G |
X: 160,561,636 (GRCm39) |
N363S |
probably benign |
Het |
Ranbp17 |
A |
T |
11: 33,169,241 (GRCm39) |
V991D |
possibly damaging |
Het |
Rimbp2 |
G |
A |
5: 128,865,656 (GRCm39) |
T557M |
probably benign |
Het |
Rmi1 |
G |
A |
13: 58,557,280 (GRCm39) |
G510R |
probably damaging |
Het |
Sdad1 |
A |
G |
5: 92,434,684 (GRCm39) |
*687Q |
probably null |
Het |
Sema6d |
T |
C |
2: 124,506,166 (GRCm39) |
L720P |
probably damaging |
Het |
Setx |
T |
G |
2: 29,024,045 (GRCm39) |
|
probably null |
Het |
Sgsm3 |
T |
C |
15: 80,892,200 (GRCm39) |
V256A |
probably benign |
Het |
Slc28a2b |
C |
A |
2: 122,353,259 (GRCm39) |
L480I |
probably benign |
Het |
Sppl2c |
T |
A |
11: 104,078,127 (GRCm39) |
I309K |
possibly damaging |
Het |
Stard9 |
A |
G |
2: 120,531,111 (GRCm39) |
E2456G |
probably damaging |
Het |
Strn3 |
C |
G |
12: 51,694,803 (GRCm39) |
R320P |
probably damaging |
Het |
Supv3l1 |
A |
T |
10: 62,266,375 (GRCm39) |
N600K |
possibly damaging |
Het |
Syne2 |
T |
A |
12: 76,146,112 (GRCm39) |
S6377T |
possibly damaging |
Het |
Tas2r123 |
A |
T |
6: 132,824,190 (GRCm39) |
H29L |
probably benign |
Het |
Tbl3 |
C |
T |
17: 24,924,944 (GRCm39) |
V52M |
possibly damaging |
Het |
Tbp |
A |
G |
17: 15,727,609 (GRCm39) |
I145V |
probably benign |
Het |
Tcf20 |
A |
T |
15: 82,739,910 (GRCm39) |
S514T |
possibly damaging |
Het |
Tgm4 |
A |
G |
9: 122,885,559 (GRCm39) |
Y367C |
probably damaging |
Het |
Tle1 |
C |
T |
4: 72,060,081 (GRCm39) |
V258M |
probably damaging |
Het |
Tln1 |
C |
T |
4: 43,540,661 (GRCm39) |
V1447I |
probably benign |
Het |
Tnfrsf11b |
C |
T |
15: 54,141,622 (GRCm39) |
A8T |
probably benign |
Het |
Trim80 |
A |
T |
11: 115,338,843 (GRCm39) |
T558S |
probably benign |
Het |
Trmt6 |
C |
A |
2: 132,650,703 (GRCm39) |
A302S |
probably benign |
Het |
Tsen15 |
C |
T |
1: 152,259,131 (GRCm39) |
V76I |
probably damaging |
Het |
Ttc17 |
A |
T |
2: 94,133,985 (GRCm39) |
W1067R |
probably damaging |
Het |
Ucn3 |
A |
T |
13: 3,991,474 (GRCm39) |
F59L |
probably benign |
Het |
Ulk3 |
T |
A |
9: 57,498,023 (GRCm39) |
I108N |
possibly damaging |
Het |
Vmn2r94 |
A |
C |
17: 18,464,728 (GRCm39) |
Y521D |
probably damaging |
Het |
Vps45 |
T |
C |
3: 95,965,086 (GRCm39) |
M1V |
probably null |
Het |
Vta1 |
C |
A |
10: 14,581,143 (GRCm39) |
L21F |
probably damaging |
Het |
Zdhhc21 |
C |
T |
4: 82,765,929 (GRCm39) |
G2D |
probably damaging |
Het |
Zfp169 |
A |
T |
13: 48,643,751 (GRCm39) |
C459S |
possibly damaging |
Het |
Zfp90 |
C |
T |
8: 107,152,000 (GRCm39) |
T571M |
probably damaging |
Het |
Zswim8 |
A |
T |
14: 20,768,939 (GRCm39) |
N1119I |
possibly damaging |
Het |
|
Other mutations in Loxhd1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00330:Loxhd1
|
APN |
18 |
77,483,146 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL00490:Loxhd1
|
APN |
18 |
77,518,770 (GRCm39) |
missense |
possibly damaging |
0.94 |
IGL00507:Loxhd1
|
APN |
18 |
77,420,263 (GRCm39) |
missense |
probably benign |
0.03 |
IGL00546:Loxhd1
|
APN |
18 |
77,493,672 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL01369:Loxhd1
|
APN |
18 |
77,416,897 (GRCm39) |
missense |
possibly damaging |
0.85 |
IGL01767:Loxhd1
|
APN |
18 |
77,374,120 (GRCm39) |
missense |
possibly damaging |
0.71 |
IGL02245:Loxhd1
|
APN |
18 |
77,427,797 (GRCm39) |
missense |
possibly damaging |
0.71 |
IGL02388:Loxhd1
|
APN |
18 |
77,456,833 (GRCm39) |
missense |
probably benign |
0.18 |
IGL02410:Loxhd1
|
APN |
18 |
77,490,648 (GRCm39) |
missense |
probably benign |
0.02 |
IGL02593:Loxhd1
|
APN |
18 |
77,498,235 (GRCm39) |
missense |
possibly damaging |
0.91 |
IGL02632:Loxhd1
|
APN |
18 |
77,493,628 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02692:Loxhd1
|
APN |
18 |
77,444,609 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02796:Loxhd1
|
APN |
18 |
77,456,811 (GRCm39) |
splice site |
probably benign |
|
IGL03032:Loxhd1
|
APN |
18 |
77,374,169 (GRCm39) |
missense |
possibly damaging |
0.93 |
IGL03074:Loxhd1
|
APN |
18 |
77,529,480 (GRCm39) |
missense |
possibly damaging |
0.75 |
IGL03094:Loxhd1
|
APN |
18 |
77,518,809 (GRCm39) |
missense |
possibly damaging |
0.88 |
IGL03118:Loxhd1
|
APN |
18 |
77,468,160 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03232:Loxhd1
|
APN |
18 |
77,496,446 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03377:Loxhd1
|
APN |
18 |
77,529,369 (GRCm39) |
missense |
possibly damaging |
0.91 |
H8562:Loxhd1
|
UTSW |
18 |
77,429,627 (GRCm39) |
missense |
possibly damaging |
0.93 |
PIT4494001:Loxhd1
|
UTSW |
18 |
77,529,464 (GRCm39) |
missense |
probably damaging |
0.99 |
R0003:Loxhd1
|
UTSW |
18 |
77,427,196 (GRCm39) |
missense |
probably damaging |
0.98 |
R0003:Loxhd1
|
UTSW |
18 |
77,427,196 (GRCm39) |
missense |
probably damaging |
0.98 |
R0048:Loxhd1
|
UTSW |
18 |
77,496,474 (GRCm39) |
missense |
probably damaging |
0.99 |
R0049:Loxhd1
|
UTSW |
18 |
77,468,256 (GRCm39) |
splice site |
probably benign |
|
R0049:Loxhd1
|
UTSW |
18 |
77,468,256 (GRCm39) |
splice site |
probably benign |
|
R0206:Loxhd1
|
UTSW |
18 |
77,492,562 (GRCm39) |
missense |
possibly damaging |
0.90 |
R0206:Loxhd1
|
UTSW |
18 |
77,492,562 (GRCm39) |
missense |
possibly damaging |
0.90 |
R0208:Loxhd1
|
UTSW |
18 |
77,492,562 (GRCm39) |
missense |
possibly damaging |
0.90 |
R0323:Loxhd1
|
UTSW |
18 |
77,456,833 (GRCm39) |
missense |
probably benign |
0.18 |
R0332:Loxhd1
|
UTSW |
18 |
77,471,526 (GRCm39) |
splice site |
probably null |
|
R0367:Loxhd1
|
UTSW |
18 |
77,513,453 (GRCm39) |
splice site |
probably benign |
|
R0709:Loxhd1
|
UTSW |
18 |
77,492,665 (GRCm39) |
missense |
probably benign |
0.23 |
R0783:Loxhd1
|
UTSW |
18 |
77,517,680 (GRCm39) |
missense |
possibly damaging |
0.58 |
R1132:Loxhd1
|
UTSW |
18 |
77,517,639 (GRCm39) |
missense |
possibly damaging |
0.71 |
R1232:Loxhd1
|
UTSW |
18 |
77,493,699 (GRCm39) |
critical splice donor site |
probably null |
|
R1331:Loxhd1
|
UTSW |
18 |
77,490,632 (GRCm39) |
missense |
possibly damaging |
0.86 |
R1465:Loxhd1
|
UTSW |
18 |
77,468,269 (GRCm39) |
splice site |
probably null |
|
R1465:Loxhd1
|
UTSW |
18 |
77,468,269 (GRCm39) |
splice site |
probably null |
|
R1501:Loxhd1
|
UTSW |
18 |
77,444,528 (GRCm39) |
missense |
probably damaging |
1.00 |
R1640:Loxhd1
|
UTSW |
18 |
77,490,259 (GRCm39) |
missense |
probably damaging |
1.00 |
R1656:Loxhd1
|
UTSW |
18 |
77,409,364 (GRCm39) |
missense |
possibly damaging |
0.71 |
R1671:Loxhd1
|
UTSW |
18 |
77,492,498 (GRCm39) |
missense |
probably damaging |
1.00 |
R1725:Loxhd1
|
UTSW |
18 |
77,380,937 (GRCm39) |
missense |
probably benign |
0.32 |
R1735:Loxhd1
|
UTSW |
18 |
77,492,585 (GRCm39) |
missense |
probably damaging |
0.98 |
R1796:Loxhd1
|
UTSW |
18 |
77,513,335 (GRCm39) |
missense |
possibly damaging |
0.88 |
R1796:Loxhd1
|
UTSW |
18 |
77,493,603 (GRCm39) |
missense |
probably damaging |
0.96 |
R1800:Loxhd1
|
UTSW |
18 |
77,490,198 (GRCm39) |
missense |
probably damaging |
1.00 |
R1848:Loxhd1
|
UTSW |
18 |
77,369,667 (GRCm39) |
missense |
possibly damaging |
0.53 |
R1912:Loxhd1
|
UTSW |
18 |
77,427,833 (GRCm39) |
missense |
probably benign |
0.32 |
R1945:Loxhd1
|
UTSW |
18 |
77,492,504 (GRCm39) |
missense |
probably damaging |
1.00 |
R1978:Loxhd1
|
UTSW |
18 |
77,409,338 (GRCm39) |
missense |
possibly damaging |
0.86 |
R1997:Loxhd1
|
UTSW |
18 |
77,383,465 (GRCm39) |
missense |
probably damaging |
0.98 |
R2086:Loxhd1
|
UTSW |
18 |
77,472,642 (GRCm39) |
missense |
probably damaging |
1.00 |
R2153:Loxhd1
|
UTSW |
18 |
77,443,862 (GRCm39) |
missense |
possibly damaging |
0.72 |
R3124:Loxhd1
|
UTSW |
18 |
77,518,774 (GRCm39) |
missense |
probably damaging |
0.97 |
R3896:Loxhd1
|
UTSW |
18 |
77,469,719 (GRCm39) |
missense |
possibly damaging |
0.65 |
R3907:Loxhd1
|
UTSW |
18 |
77,496,464 (GRCm39) |
missense |
possibly damaging |
0.60 |
R3980:Loxhd1
|
UTSW |
18 |
77,501,855 (GRCm39) |
missense |
probably damaging |
1.00 |
R4165:Loxhd1
|
UTSW |
18 |
77,460,025 (GRCm39) |
missense |
probably damaging |
0.99 |
R4166:Loxhd1
|
UTSW |
18 |
77,460,025 (GRCm39) |
missense |
probably damaging |
0.99 |
R4176:Loxhd1
|
UTSW |
18 |
77,418,755 (GRCm39) |
missense |
possibly damaging |
0.53 |
R4345:Loxhd1
|
UTSW |
18 |
77,486,697 (GRCm39) |
missense |
possibly damaging |
0.89 |
R4354:Loxhd1
|
UTSW |
18 |
77,483,123 (GRCm39) |
missense |
probably damaging |
1.00 |
R4385:Loxhd1
|
UTSW |
18 |
77,460,607 (GRCm39) |
missense |
probably damaging |
0.99 |
R4402:Loxhd1
|
UTSW |
18 |
77,529,456 (GRCm39) |
missense |
possibly damaging |
0.94 |
R4404:Loxhd1
|
UTSW |
18 |
77,518,828 (GRCm39) |
missense |
probably damaging |
1.00 |
R4456:Loxhd1
|
UTSW |
18 |
77,486,785 (GRCm39) |
missense |
probably damaging |
1.00 |
R4525:Loxhd1
|
UTSW |
18 |
77,444,608 (GRCm39) |
missense |
probably damaging |
0.98 |
R4605:Loxhd1
|
UTSW |
18 |
77,493,642 (GRCm39) |
missense |
probably benign |
0.00 |
R4661:Loxhd1
|
UTSW |
18 |
77,490,581 (GRCm39) |
missense |
possibly damaging |
0.79 |
R4698:Loxhd1
|
UTSW |
18 |
77,459,987 (GRCm39) |
missense |
possibly damaging |
0.82 |
R4725:Loxhd1
|
UTSW |
18 |
77,483,153 (GRCm39) |
missense |
probably damaging |
1.00 |
R4820:Loxhd1
|
UTSW |
18 |
77,472,663 (GRCm39) |
missense |
probably damaging |
1.00 |
R5163:Loxhd1
|
UTSW |
18 |
77,449,432 (GRCm39) |
missense |
possibly damaging |
0.92 |
R5328:Loxhd1
|
UTSW |
18 |
77,498,268 (GRCm39) |
missense |
probably damaging |
1.00 |
R5329:Loxhd1
|
UTSW |
18 |
77,420,378 (GRCm39) |
missense |
probably damaging |
0.98 |
R5347:Loxhd1
|
UTSW |
18 |
77,454,237 (GRCm39) |
missense |
probably damaging |
1.00 |
R5589:Loxhd1
|
UTSW |
18 |
77,429,751 (GRCm39) |
missense |
possibly damaging |
0.86 |
R5616:Loxhd1
|
UTSW |
18 |
77,492,647 (GRCm39) |
missense |
probably damaging |
1.00 |
R5703:Loxhd1
|
UTSW |
18 |
77,444,573 (GRCm39) |
missense |
probably damaging |
1.00 |
R5837:Loxhd1
|
UTSW |
18 |
77,374,105 (GRCm39) |
missense |
possibly damaging |
0.71 |
R5888:Loxhd1
|
UTSW |
18 |
77,490,211 (GRCm39) |
missense |
probably damaging |
0.99 |
R6021:Loxhd1
|
UTSW |
18 |
77,499,946 (GRCm39) |
missense |
probably damaging |
1.00 |
R6032:Loxhd1
|
UTSW |
18 |
77,469,254 (GRCm39) |
missense |
probably damaging |
1.00 |
R6032:Loxhd1
|
UTSW |
18 |
77,469,254 (GRCm39) |
missense |
probably damaging |
1.00 |
R6153:Loxhd1
|
UTSW |
18 |
77,383,454 (GRCm39) |
missense |
possibly damaging |
0.71 |
R6174:Loxhd1
|
UTSW |
18 |
77,499,874 (GRCm39) |
missense |
probably damaging |
1.00 |
R6265:Loxhd1
|
UTSW |
18 |
77,449,426 (GRCm39) |
missense |
probably damaging |
0.99 |
R6377:Loxhd1
|
UTSW |
18 |
77,468,128 (GRCm39) |
missense |
probably damaging |
1.00 |
R6530:Loxhd1
|
UTSW |
18 |
77,499,847 (GRCm39) |
missense |
probably benign |
0.30 |
R6555:Loxhd1
|
UTSW |
18 |
77,380,965 (GRCm39) |
missense |
possibly damaging |
0.51 |
R6782:Loxhd1
|
UTSW |
18 |
77,518,873 (GRCm39) |
missense |
probably damaging |
0.99 |
R6834:Loxhd1
|
UTSW |
18 |
77,529,222 (GRCm39) |
missense |
probably damaging |
1.00 |
R7000:Loxhd1
|
UTSW |
18 |
77,460,129 (GRCm39) |
critical splice donor site |
probably null |
|
R7112:Loxhd1
|
UTSW |
18 |
77,476,210 (GRCm39) |
missense |
probably damaging |
1.00 |
R7203:Loxhd1
|
UTSW |
18 |
77,501,892 (GRCm39) |
missense |
probably damaging |
0.97 |
R7206:Loxhd1
|
UTSW |
18 |
77,529,513 (GRCm39) |
missense |
probably damaging |
0.97 |
R7260:Loxhd1
|
UTSW |
18 |
77,420,338 (GRCm39) |
missense |
possibly damaging |
0.93 |
R7432:Loxhd1
|
UTSW |
18 |
77,383,547 (GRCm39) |
missense |
possibly damaging |
0.51 |
R7475:Loxhd1
|
UTSW |
18 |
77,500,001 (GRCm39) |
missense |
possibly damaging |
0.83 |
R7555:Loxhd1
|
UTSW |
18 |
77,483,061 (GRCm39) |
missense |
probably damaging |
0.99 |
R7590:Loxhd1
|
UTSW |
18 |
77,409,330 (GRCm39) |
missense |
possibly damaging |
0.84 |
R7612:Loxhd1
|
UTSW |
18 |
77,517,671 (GRCm39) |
missense |
possibly damaging |
0.95 |
R7626:Loxhd1
|
UTSW |
18 |
77,518,882 (GRCm39) |
missense |
possibly damaging |
0.75 |
R7768:Loxhd1
|
UTSW |
18 |
77,472,637 (GRCm39) |
missense |
probably damaging |
0.99 |
R7791:Loxhd1
|
UTSW |
18 |
77,471,425 (GRCm39) |
missense |
probably damaging |
1.00 |
R7829:Loxhd1
|
UTSW |
18 |
77,496,483 (GRCm39) |
missense |
probably damaging |
0.99 |
R7884:Loxhd1
|
UTSW |
18 |
77,518,909 (GRCm39) |
missense |
probably damaging |
0.98 |
R7960:Loxhd1
|
UTSW |
18 |
77,472,746 (GRCm39) |
missense |
probably damaging |
0.99 |
R7986:Loxhd1
|
UTSW |
18 |
77,462,890 (GRCm39) |
missense |
possibly damaging |
0.88 |
R8042:Loxhd1
|
UTSW |
18 |
77,518,888 (GRCm39) |
missense |
probably damaging |
0.99 |
R8084:Loxhd1
|
UTSW |
18 |
77,427,845 (GRCm39) |
missense |
possibly damaging |
0.71 |
R8088:Loxhd1
|
UTSW |
18 |
77,429,709 (GRCm39) |
missense |
possibly damaging |
0.52 |
R8100:Loxhd1
|
UTSW |
18 |
77,492,512 (GRCm39) |
missense |
possibly damaging |
0.69 |
R8139:Loxhd1
|
UTSW |
18 |
77,468,192 (GRCm39) |
missense |
possibly damaging |
0.95 |
R8152:Loxhd1
|
UTSW |
18 |
77,476,095 (GRCm39) |
missense |
possibly damaging |
0.62 |
R8199:Loxhd1
|
UTSW |
18 |
77,469,334 (GRCm39) |
missense |
possibly damaging |
0.77 |
R8246:Loxhd1
|
UTSW |
18 |
77,451,242 (GRCm39) |
missense |
possibly damaging |
0.71 |
R8263:Loxhd1
|
UTSW |
18 |
77,462,858 (GRCm39) |
missense |
probably damaging |
1.00 |
R8324:Loxhd1
|
UTSW |
18 |
77,427,275 (GRCm39) |
critical splice donor site |
probably null |
|
R8342:Loxhd1
|
UTSW |
18 |
77,493,681 (GRCm39) |
missense |
possibly damaging |
0.88 |
R8401:Loxhd1
|
UTSW |
18 |
77,468,156 (GRCm39) |
missense |
probably damaging |
1.00 |
R8480:Loxhd1
|
UTSW |
18 |
77,518,827 (GRCm39) |
missense |
probably damaging |
1.00 |
R8490:Loxhd1
|
UTSW |
18 |
77,529,162 (GRCm39) |
missense |
possibly damaging |
0.96 |
R8807:Loxhd1
|
UTSW |
18 |
77,444,468 (GRCm39) |
missense |
possibly damaging |
0.93 |
R8961:Loxhd1
|
UTSW |
18 |
77,472,765 (GRCm39) |
missense |
probably damaging |
1.00 |
R8974:Loxhd1
|
UTSW |
18 |
77,518,899 (GRCm39) |
missense |
possibly damaging |
0.88 |
R9079:Loxhd1
|
UTSW |
18 |
77,490,593 (GRCm39) |
missense |
probably benign |
|
R9284:Loxhd1
|
UTSW |
18 |
77,501,826 (GRCm39) |
missense |
probably damaging |
0.97 |
R9312:Loxhd1
|
UTSW |
18 |
77,498,285 (GRCm39) |
missense |
probably benign |
0.05 |
R9619:Loxhd1
|
UTSW |
18 |
77,443,871 (GRCm39) |
missense |
probably benign |
0.32 |
X0020:Loxhd1
|
UTSW |
18 |
77,427,258 (GRCm39) |
nonsense |
probably null |
|
X0024:Loxhd1
|
UTSW |
18 |
77,483,099 (GRCm39) |
missense |
probably damaging |
1.00 |
X0062:Loxhd1
|
UTSW |
18 |
77,529,212 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Predicted Primers |
PCR Primer
(F):5'- TGTTCCCTGGCTGAAGATTG -3'
(R):5'- CCCTAAGTGTATGGCTCTTGTC -3'
Sequencing Primer
(F):5'- GCTGAAGATTGCCCCCTC -3'
(R):5'- CCTTAAAATGGGCTCATCATGTGCAG -3'
|
Posted On |
2016-08-04 |