Mutagenetix > Incidental Mutation

Incidental Mutation 'R5369:Rbm45'

429518

Institutional Source

Beutler Lab

Gene Symbol

Rbm45

Ensembl Gene

ENSMUSG00000042369

Gene Name

RNA binding motif protein 45

Synonyms

G430095G15Rik, Drb1, Drbp1

MMRRC Submission

042946-MU

Accession Numbers

Essential gene?

Probably essential (E-score: 0.932) question?

Stock #

R5369 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

76200328-76214112 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 76200594 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Leucine to Glutamine at position 41 (L41Q)

Ref Sequence

ENSEMBL: ENSMUSP00000040420 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000046389]

AlphaFold

Q8BHN5

Predicted Effect

probably damaging
Transcript: ENSMUST00000046389
AA Change: L41Q

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000040420
Gene: ENSMUSG00000042369
AA Change: L41Q

Domain	Start	End	E-Value	Type
low complexity region	5	16	N/A	INTRINSIC
RRM	27	102	2.08e-12	SMART
RRM	122	191	1.37e-12	SMART
RRM	249	320	2.27e-1	SMART
RRM	394	460	4.07e-6	SMART

Meta Mutation Damage Score

0.8206

Coding Region Coverage

1x: 99.3%
3x: 98.7%
10x: 97.4%
20x: 95.6%

Validation Efficiency

99% (77/78)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the RNA recognition motif (RRM)-type RNA-binding family of proteins. This protein exhibits preferential binding to poly(C) RNA. Initial cloning of this gene found that the rat ortholog was dynamically expressed in the developing rat brain. This protein has been localized to inclusion bodies in the brain and spinal cord of amyotrophic lateral sclerosis and Alzheimer's patients. A pseudogene has been identified on chromosome 8. [provided by RefSeq, Feb 2015]

Allele List at MGI

Other mutations in this stock

Total: 74 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
A2ml1	T	C	6: 128,545,796 (GRCm39)	T444A	probably damaging	Het
A330070K13Rik	G	A	5: 130,407,932 (GRCm39)		probably benign	Het
Abcb8	C	T	5: 24,605,137 (GRCm39)	R108C	possibly damaging	Het
Acbd5	T	A	2: 23,002,522 (GRCm39)	L508Q	probably damaging	Het
Asb15	T	C	6: 24,562,563 (GRCm39)	V175A	probably benign	Het
B3galnt2	T	C	13: 14,169,010 (GRCm39)		probably null	Het
BC024139	A	C	15: 76,004,422 (GRCm39)	S711R	probably benign	Het
Bod1l	A	G	5: 41,984,526 (GRCm39)	I508T	probably damaging	Het
Btnl6	T	A	17: 34,726,959 (GRCm39)	R524*	probably null	Het
C3	C	A	17: 57,528,159 (GRCm39)	D687Y	probably benign	Het
Ccbe1	G	A	18: 66,194,485 (GRCm39)	A367V	probably benign	Het
Ccr1	A	T	9: 123,764,326 (GRCm39)	M68K	probably damaging	Het
Cd27	T	A	6: 125,211,327 (GRCm39)		probably benign	Het
Celf2	C	A	2: 7,085,892 (GRCm39)		probably benign	Het
Cfap54	T	C	10: 92,897,119 (GRCm39)		probably benign	Het
Cfap97	A	G	8: 46,622,687 (GRCm39)	K26E	probably damaging	Het
Clcn4	T	A	7: 7,299,032 (GRCm39)	I48F	probably benign	Het
Cnot7	A	T	8: 40,947,061 (GRCm39)	N238K	probably benign	Het
Colec12	A	G	18: 9,866,750 (GRCm39)	I654V	unknown	Het
Dip2a	A	G	10: 76,128,194 (GRCm39)	I22T	probably damaging	Het
Eif4g3	C	T	4: 137,910,645 (GRCm39)	T1375M	possibly damaging	Het
Eml5	C	T	12: 98,825,042 (GRCm39)	G725D	probably damaging	Het
F12	T	C	13: 55,566,304 (GRCm39)	E496G	probably benign	Het
Fam227a	A	T	15: 79,499,637 (GRCm39)	S573T	probably benign	Het
Fnip1	T	C	11: 54,393,415 (GRCm39)	V593A	probably benign	Het
Focad	T	A	4: 88,039,610 (GRCm39)		probably benign	Het
Frem1	A	G	4: 82,919,976 (GRCm39)	I460T	possibly damaging	Het
Galnt10	T	G	11: 57,656,573 (GRCm39)		probably null	Het
Gm5592	A	T	7: 40,867,635 (GRCm39)		probably benign	Het
Gm6185	A	T	1: 161,037,330 (GRCm39)		noncoding transcript	Het
Gm7935	A	T	15: 73,952,963 (GRCm39)		noncoding transcript	Het
Grb14	C	T	2: 64,747,653 (GRCm39)	V369I	probably benign	Het
Gstm5	G	A	3: 107,805,782 (GRCm39)	A198T	probably damaging	Het
Herc2	T	A	7: 55,832,448 (GRCm39)	V3048D	probably damaging	Het
Htra4	T	G	8: 25,523,585 (GRCm39)	I327L	possibly damaging	Het
Ifi209	T	C	1: 173,464,873 (GRCm39)	M1T	probably null	Het
Ints6	T	C	14: 62,981,384 (GRCm39)	T135A	probably damaging	Het
Itpr1	T	A	6: 108,496,385 (GRCm39)	I2604N	probably damaging	Het
Krt6a	T	A	15: 101,600,993 (GRCm39)	M268L	probably benign	Het
Lrp1b	G	T	2: 40,894,625 (GRCm39)	S2201*	probably null	Het
Lrp2	T	C	2: 69,289,904 (GRCm39)	N3645S	probably benign	Het
Lrrc15	A	T	16: 30,091,722 (GRCm39)	I539N	possibly damaging	Het
Map3k6	T	C	4: 132,974,992 (GRCm39)	I675T	probably damaging	Het
Map3k9	T	A	12: 81,768,826 (GRCm39)	E1074V	probably damaging	Het
Med13l	T	A	5: 118,862,075 (GRCm39)	S339R	probably benign	Het
Mrps18a	T	C	17: 46,436,552 (GRCm39)		probably benign	Het
Mtcl2	T	C	2: 156,882,654 (GRCm39)	E466G	probably damaging	Het
Nat8f2	G	T	6: 85,844,854 (GRCm39)	Y169*	probably null	Het
Nlrp1b	A	G	11: 71,072,625 (GRCm39)	I406T	probably benign	Het
Npc1l1	A	G	11: 6,167,705 (GRCm39)		probably null	Het
Or10z1	A	G	1: 174,078,007 (GRCm39)	V162A	probably damaging	Het
Or5ac20	A	T	16: 59,104,743 (GRCm39)	M39K	probably damaging	Het
Ostf1	C	T	19: 18,558,689 (GRCm39)	G198E	probably benign	Het
Pcsk5	A	G	19: 17,558,619 (GRCm39)	V596A	probably damaging	Het
Pde4c	T	C	8: 71,202,754 (GRCm39)	*647Q	probably null	Het
Pkm	A	T	9: 59,577,917 (GRCm39)	I245F	probably damaging	Het
Prss3b	T	A	6: 41,009,940 (GRCm39)	R131S	probably benign	Het
Ptprj	T	C	2: 90,299,985 (GRCm39)	H179R	probably benign	Het
Rapgef2	A	T	3: 78,976,739 (GRCm39)	S1356T	probably benign	Het
Rsf1	ATGGCG	ATGGCGACGGTGGCG	7: 97,229,111 (GRCm39)		probably benign	Het
Scara5	CG	C	14: 65,997,111 (GRCm39)		probably null	Het
Scel	A	T	14: 103,823,929 (GRCm39)	I386F	probably benign	Het
Serpinb5	A	T	1: 106,809,487 (GRCm39)	N298Y	possibly damaging	Het
Sirt3	A	T	7: 140,449,406 (GRCm39)	L180Q	probably damaging	Het
Slc24a2	C	T	4: 86,909,625 (GRCm39)	V698I	probably damaging	Het
Slc43a3	A	T	2: 84,788,067 (GRCm39)	H483L	probably damaging	Het
Snrnp35	A	G	5: 124,628,262 (GRCm39)	D25G	probably benign	Het
Snrnp40	T	C	4: 130,256,439 (GRCm39)	S55P	probably damaging	Het
Snx9	T	A	17: 5,970,855 (GRCm39)	C399S	probably damaging	Het
Ttbk2	T	C	2: 120,655,743 (GRCm39)		probably benign	Het
Vmn1r1	A	G	1: 181,985,341 (GRCm39)	V108A	possibly damaging	Het
Vmn1r201	T	A	13: 22,659,672 (GRCm39)	N295K	probably benign	Het
Zfp292	G	A	4: 34,807,491 (GRCm39)	P1851L	possibly damaging	Het
Zfp472	A	T	17: 33,196,717 (GRCm39)	D264V	probably damaging	Het

Other mutations in Rbm45

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00163:Rbm45	APN	2	76,209,051 (GRCm39)	missense	probably damaging	1.00
IGL03335:Rbm45	APN	2	76,206,777 (GRCm39)	missense	probably damaging	1.00
R0008:Rbm45	UTSW	2	76,208,742 (GRCm39)	missense	probably damaging	1.00
R0008:Rbm45	UTSW	2	76,208,742 (GRCm39)	missense	probably damaging	1.00
R0382:Rbm45	UTSW	2	76,200,555 (GRCm39)	missense	possibly damaging	0.92
R1468:Rbm45	UTSW	2	76,202,459 (GRCm39)	missense	probably damaging	1.00
R1468:Rbm45	UTSW	2	76,202,459 (GRCm39)	missense	probably damaging	1.00
R1533:Rbm45	UTSW	2	76,202,503 (GRCm39)	critical splice donor site	probably null
R1942:Rbm45	UTSW	2	76,205,823 (GRCm39)	critical splice donor site	probably null
R2046:Rbm45	UTSW	2	76,205,742 (GRCm39)	missense	probably benign
R2912:Rbm45	UTSW	2	76,205,798 (GRCm39)	missense	probably benign	0.05
R2913:Rbm45	UTSW	2	76,205,798 (GRCm39)	missense	probably benign	0.05
R2929:Rbm45	UTSW	2	76,208,763 (GRCm39)	missense	probably benign	0.00
R3418:Rbm45	UTSW	2	76,209,362 (GRCm39)	missense	probably damaging	1.00
R3886:Rbm45	UTSW	2	76,205,768 (GRCm39)	missense	probably benign
R3887:Rbm45	UTSW	2	76,205,768 (GRCm39)	missense	probably benign
R3888:Rbm45	UTSW	2	76,205,768 (GRCm39)	missense	probably benign
R4488:Rbm45	UTSW	2	76,206,740 (GRCm39)	missense	probably damaging	0.99
R5990:Rbm45	UTSW	2	76,200,756 (GRCm39)	missense	probably benign	0.36
R6569:Rbm45	UTSW	2	76,209,416 (GRCm39)	missense	probably damaging	1.00
R6806:Rbm45	UTSW	2	76,210,804 (GRCm39)	missense	probably benign	0.19
R7022:Rbm45	UTSW	2	76,206,738 (GRCm39)	missense	probably damaging	1.00
R7832:Rbm45	UTSW	2	76,206,797 (GRCm39)	missense	possibly damaging	0.80
R8720:Rbm45	UTSW	2	76,210,711 (GRCm39)	missense	probably damaging	1.00
R8933:Rbm45	UTSW	2	76,209,068 (GRCm39)	missense	probably damaging	1.00
R9064:Rbm45	UTSW	2	76,202,446 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- CTGCAGAATGTTCCCGGAAG -3'
(R):5'- TGGGCATCTCTACCTCACAC -3'

Sequencing Primer
(F):5'- ACGCACCTGCTTTCCGG -3'
(R):5'- CGCACCTTGATGGGCTTG -3'

Posted On

2016-09-06