Incidental Mutation 'R5396:Kdm5b'
ID |
429625 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Kdm5b
|
Ensembl Gene |
ENSMUSG00000042207 |
Gene Name |
lysine demethylase 5B |
Synonyms |
2010009J12Rik, PLU-1, Rb-Bp2, Jarid1b, D1Ertd202e, Plu1, 2210016I17Rik |
MMRRC Submission |
044394-MU
|
Accession Numbers |
|
Essential gene? |
Possibly non essential
(E-score: 0.451)
|
Stock # |
R5396 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
1 |
Chromosomal Location |
134487916-134560621 bp(+) (GRCm39) |
Type of Mutation |
splice site (5 bp from exon) |
DNA Base Change (assembly) |
G to A
at 134549836 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
|
Ref Sequence |
ENSEMBL: ENSMUSP00000107817
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000047714]
[ENSMUST00000112198]
|
AlphaFold |
Q80Y84 |
PDB Structure |
Solution structure of the ARID domain of Jarid1b protein [SOLUTION NMR]
|
Predicted Effect |
probably null
Transcript: ENSMUST00000047714
|
SMART Domains |
Protein: ENSMUSP00000038138 Gene: ENSMUSG00000042207
Domain | Start | End | E-Value | Type |
low complexity region
|
7 |
30 |
N/A |
INTRINSIC |
JmjN
|
31 |
72 |
2.87e-20 |
SMART |
ARID
|
94 |
183 |
7.39e-32 |
SMART |
BRIGHT
|
98 |
188 |
1.51e-35 |
SMART |
low complexity region
|
228 |
239 |
N/A |
INTRINSIC |
PHD
|
311 |
357 |
6.15e-14 |
SMART |
JmjC
|
453 |
619 |
2.33e-67 |
SMART |
Pfam:zf-C5HC2
|
692 |
744 |
2.2e-17 |
PFAM |
Pfam:PLU-1
|
757 |
1088 |
5.6e-92 |
PFAM |
low complexity region
|
1097 |
1109 |
N/A |
INTRINSIC |
PHD
|
1178 |
1222 |
6.2e-10 |
SMART |
low complexity region
|
1225 |
1236 |
N/A |
INTRINSIC |
low complexity region
|
1406 |
1417 |
N/A |
INTRINSIC |
low complexity region
|
1470 |
1484 |
N/A |
INTRINSIC |
PHD
|
1486 |
1536 |
1.18e-6 |
SMART |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000112198
|
SMART Domains |
Protein: ENSMUSP00000107817 Gene: ENSMUSG00000042207
Domain | Start | End | E-Value | Type |
low complexity region
|
7 |
30 |
N/A |
INTRINSIC |
JmjN
|
31 |
72 |
2.87e-20 |
SMART |
ARID
|
94 |
183 |
7.39e-32 |
SMART |
BRIGHT
|
98 |
188 |
1.51e-35 |
SMART |
low complexity region
|
228 |
239 |
N/A |
INTRINSIC |
PHD
|
311 |
357 |
6.15e-14 |
SMART |
JmjC
|
453 |
619 |
2.33e-67 |
SMART |
Pfam:zf-C5HC2
|
692 |
745 |
6.7e-21 |
PFAM |
Pfam:PLU-1
|
756 |
1088 |
6e-94 |
PFAM |
low complexity region
|
1097 |
1109 |
N/A |
INTRINSIC |
PHD
|
1178 |
1222 |
6.2e-10 |
SMART |
low complexity region
|
1225 |
1236 |
N/A |
INTRINSIC |
low complexity region
|
1406 |
1417 |
N/A |
INTRINSIC |
low complexity region
|
1470 |
1484 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000133725
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000191572
|
Meta Mutation Damage Score |
0.9755 |
Coding Region Coverage |
- 1x: 99.3%
- 3x: 98.7%
- 10x: 97.3%
- 20x: 95.5%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: This gene encodes a lysine-specific histone demethylase that belongs to the jumonji/ARID domain-containing family of histone demethylases. The encoded protein is capable of demethylating tri-, di- and monomethylated lysine 4 of histone H3. This protein plays a role in the transcriptional repression or certain tumor suppressor genes and is upregulated in certain cancer cells. This protein may also play a role in genome stability and DNA repair. Homozygous mutant mice display decreased body weight, decreased female fertility, lower uterine weight, and a delay in mammary development. Knockout of this gene has also been associated with embryonic lethality. [provided by RefSeq, Dec 2016] PHENOTYPE: Mice homozygous for a gene trapped allele exhibit decreased body weight, background-sensitive premature mortality, decreased female fertility, delayed mammary gland development, decreased serum estradiol levels, and reduced mammary epithelial cell proliferation in early puberty. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 88 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
1810024B03Rik |
T |
C |
2: 127,028,873 (GRCm39) |
T109A |
probably damaging |
Het |
A430005L14Rik |
GCC |
G |
4: 154,045,410 (GRCm39) |
|
probably null |
Het |
Actr1a |
T |
C |
19: 46,384,103 (GRCm39) |
D5G |
possibly damaging |
Het |
Adra2c |
A |
G |
5: 35,438,217 (GRCm39) |
T330A |
probably benign |
Het |
Ahcyl2 |
C |
T |
6: 29,859,697 (GRCm39) |
|
probably benign |
Het |
Ahnak |
T |
C |
19: 8,984,539 (GRCm39) |
V1941A |
probably damaging |
Het |
Akr1b7 |
G |
A |
6: 34,389,411 (GRCm39) |
|
probably null |
Het |
Anapc15 |
C |
T |
7: 101,547,810 (GRCm39) |
P68L |
probably damaging |
Het |
Ank2 |
A |
G |
3: 126,746,875 (GRCm39) |
V570A |
probably damaging |
Het |
Ano4 |
T |
C |
10: 88,948,702 (GRCm39) |
E302G |
probably damaging |
Het |
Bop1 |
A |
T |
15: 76,339,489 (GRCm39) |
H285Q |
probably damaging |
Het |
Btbd19 |
G |
A |
4: 116,980,957 (GRCm39) |
A104V |
probably damaging |
Het |
Catsperb |
A |
T |
12: 101,560,543 (GRCm39) |
I845L |
possibly damaging |
Het |
Ccdc28b |
G |
T |
4: 129,513,238 (GRCm39) |
Q184K |
probably damaging |
Het |
Cd101 |
A |
G |
3: 100,926,126 (GRCm39) |
S198P |
probably damaging |
Het |
Cdc7 |
A |
T |
5: 107,117,163 (GRCm39) |
|
probably null |
Het |
Cdhr2 |
A |
G |
13: 54,884,269 (GRCm39) |
D1268G |
probably benign |
Het |
Celsr3 |
C |
T |
9: 108,705,781 (GRCm39) |
R755W |
probably damaging |
Het |
Chrnb1 |
T |
A |
11: 69,684,979 (GRCm39) |
N117I |
probably damaging |
Het |
Chst11 |
C |
A |
10: 83,027,083 (GRCm39) |
P170Q |
probably damaging |
Het |
Clca3b |
A |
G |
3: 144,552,932 (GRCm39) |
Y98H |
probably damaging |
Het |
Crnkl1 |
A |
G |
2: 145,770,132 (GRCm39) |
V237A |
possibly damaging |
Het |
Ctnnbl1 |
G |
A |
2: 157,659,752 (GRCm39) |
|
probably null |
Het |
Dbndd1 |
C |
A |
8: 124,236,582 (GRCm39) |
R95S |
probably damaging |
Het |
Ddx3y |
A |
G |
Y: 1,265,965 (GRCm39) |
V344A |
probably damaging |
Het |
Defb30 |
A |
T |
14: 63,273,559 (GRCm39) |
|
probably null |
Het |
Dennd10 |
T |
C |
19: 60,823,274 (GRCm39) |
L303P |
probably benign |
Het |
Dnah17 |
C |
T |
11: 118,018,108 (GRCm39) |
R129Q |
probably benign |
Het |
Dnhd1 |
A |
T |
7: 105,362,891 (GRCm39) |
M3818L |
probably benign |
Het |
Dusp4 |
G |
T |
8: 35,284,458 (GRCm39) |
D258Y |
probably damaging |
Het |
E2f1 |
A |
T |
2: 154,406,368 (GRCm39) |
F103I |
probably benign |
Het |
Elavl2 |
T |
C |
4: 91,149,055 (GRCm39) |
Y248C |
probably damaging |
Het |
Ephb3 |
T |
C |
16: 21,037,855 (GRCm39) |
V310A |
possibly damaging |
Het |
Erbin |
A |
G |
13: 103,993,917 (GRCm39) |
|
probably null |
Het |
Etv4 |
A |
T |
11: 101,666,167 (GRCm39) |
H120Q |
probably damaging |
Het |
Fcgbpl1 |
T |
C |
7: 27,839,608 (GRCm39) |
F474L |
probably benign |
Het |
Flot2 |
T |
A |
11: 77,940,314 (GRCm39) |
C20* |
probably null |
Het |
Fsip2 |
G |
A |
2: 82,821,262 (GRCm39) |
G5665D |
probably benign |
Het |
Gad1-ps |
G |
A |
10: 99,281,009 (GRCm39) |
|
noncoding transcript |
Het |
Glrp1 |
TTGGTGCTGCTGGTGCTGCTGGTGCTGCTGGTGCTGCTGGTGCTGCTGGTGCTGTTGGTGCTGCTGGTGCTGCTGGTGCTGCTGGTGCTGCTGGTGCTGCTGGTGCTGTTGGTGCTGCTGGTGCTGCTG |
TTGGTGCTGCTGGTGCTGCTGGTGCTGCTGGTGCTGCTGGTGCTGTTGGTGCTGCTGGTGCTGCTGGTGCTGCTGGTGCTGCTGGTGCTGCTGGTGCTGTTGGTGCTGCTGGTGCTGCTG |
1: 88,431,066 (GRCm39) |
|
probably benign |
Het |
Gm43302 |
A |
T |
5: 105,427,955 (GRCm39) |
L202* |
probably null |
Het |
Gm4787 |
G |
C |
12: 81,424,604 (GRCm39) |
T518S |
probably benign |
Het |
Hnf1b |
A |
T |
11: 83,746,863 (GRCm39) |
M160L |
probably damaging |
Het |
Inhbe |
T |
C |
10: 127,186,470 (GRCm39) |
T237A |
possibly damaging |
Het |
Kmt2c |
A |
T |
5: 25,499,732 (GRCm39) |
|
probably null |
Het |
Kyat3 |
A |
G |
3: 142,440,367 (GRCm39) |
K364E |
probably benign |
Het |
Lars1 |
T |
A |
18: 42,350,024 (GRCm39) |
T927S |
probably benign |
Het |
Mfap1b |
A |
T |
2: 121,304,371 (GRCm39) |
M8K |
probably benign |
Het |
Mroh8 |
G |
A |
2: 157,070,576 (GRCm39) |
P592S |
possibly damaging |
Het |
Myo3b |
A |
T |
2: 69,957,329 (GRCm39) |
I185L |
probably damaging |
Het |
Or1e16 |
AGCGGTCGTAGGC |
AGC |
11: 73,286,480 (GRCm39) |
|
probably null |
Het |
Or1x6 |
C |
T |
11: 50,939,297 (GRCm39) |
A121V |
probably damaging |
Het |
Or4c110 |
A |
T |
2: 88,832,540 (GRCm39) |
L31M |
probably benign |
Het |
Or51a24 |
T |
C |
7: 103,734,098 (GRCm39) |
Y63C |
probably benign |
Het |
Pcdha8 |
T |
A |
18: 37,126,787 (GRCm39) |
V423E |
probably damaging |
Het |
Pcdhb21 |
G |
T |
18: 37,648,772 (GRCm39) |
V634L |
probably benign |
Het |
Pde8a |
T |
C |
7: 80,983,170 (GRCm39) |
V791A |
probably damaging |
Het |
Pds5a |
A |
G |
5: 65,795,920 (GRCm39) |
S657P |
probably benign |
Het |
Pes1 |
CGGAGGAGGAGGAGGAGGAGGAGG |
CGGAGGAGGAGGAGGAGGAGG |
11: 3,927,719 (GRCm39) |
|
probably benign |
Het |
Rad51d |
A |
G |
11: 82,781,196 (GRCm39) |
V17A |
possibly damaging |
Het |
Sdc1 |
A |
T |
12: 8,841,743 (GRCm39) |
|
probably null |
Het |
Sdcbp2 |
T |
A |
2: 151,429,057 (GRCm39) |
I152N |
probably damaging |
Het |
Slc4a4 |
G |
T |
5: 89,194,076 (GRCm39) |
M141I |
probably benign |
Het |
Sntb1 |
C |
G |
15: 55,506,191 (GRCm39) |
G461R |
probably damaging |
Het |
Spata6 |
T |
C |
4: 111,656,315 (GRCm39) |
C320R |
probably damaging |
Het |
Spata6l |
T |
C |
19: 28,905,089 (GRCm39) |
H325R |
possibly damaging |
Het |
Ssu2 |
T |
A |
6: 112,357,957 (GRCm39) |
T129S |
probably damaging |
Het |
Stat5a |
T |
A |
11: 100,771,409 (GRCm39) |
W631R |
probably damaging |
Het |
Sult1c2 |
T |
A |
17: 54,143,939 (GRCm39) |
N122I |
possibly damaging |
Het |
Synpo2 |
G |
A |
3: 122,911,331 (GRCm39) |
Q105* |
probably null |
Het |
Tert |
G |
A |
13: 73,787,362 (GRCm39) |
V783I |
probably damaging |
Het |
Ticam1 |
G |
T |
17: 56,578,117 (GRCm39) |
T326K |
probably benign |
Het |
Tmem63b |
T |
C |
17: 45,980,888 (GRCm39) |
M269V |
possibly damaging |
Het |
Tmem86a |
T |
A |
7: 46,702,794 (GRCm39) |
V73E |
possibly damaging |
Het |
Trpv4 |
G |
A |
5: 114,761,675 (GRCm39) |
R818C |
possibly damaging |
Het |
Tstd2 |
A |
G |
4: 46,135,542 (GRCm39) |
S4P |
probably benign |
Het |
Ttn |
A |
T |
2: 76,644,715 (GRCm39) |
V4686E |
probably damaging |
Het |
Ubash3b |
A |
G |
9: 40,954,769 (GRCm39) |
|
probably null |
Het |
Usp31 |
A |
G |
7: 121,267,005 (GRCm39) |
|
probably null |
Het |
Usp33 |
A |
G |
3: 152,089,824 (GRCm39) |
E780G |
possibly damaging |
Het |
Vapb |
T |
A |
2: 173,613,336 (GRCm39) |
Y78* |
probably null |
Het |
Vps13b |
G |
A |
15: 35,887,094 (GRCm39) |
R3227Q |
probably damaging |
Het |
Vps33a |
A |
T |
5: 123,696,693 (GRCm39) |
I320N |
probably damaging |
Het |
Wnt5a |
T |
C |
14: 28,244,727 (GRCm39) |
C305R |
probably damaging |
Het |
Zbtb38 |
A |
G |
9: 96,569,696 (GRCm39) |
C463R |
probably damaging |
Het |
Zc3h12d |
G |
A |
10: 7,742,090 (GRCm39) |
C263Y |
probably damaging |
Het |
Zfp971 |
G |
A |
2: 177,675,526 (GRCm39) |
R375Q |
probably damaging |
Het |
Znrf1 |
T |
A |
8: 112,345,826 (GRCm39) |
|
probably null |
Het |
|
Other mutations in Kdm5b |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00230:Kdm5b
|
APN |
1 |
134,548,693 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01458:Kdm5b
|
APN |
1 |
134,549,724 (GRCm39) |
missense |
possibly damaging |
0.53 |
IGL01567:Kdm5b
|
APN |
1 |
134,530,278 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01625:Kdm5b
|
APN |
1 |
134,545,706 (GRCm39) |
missense |
possibly damaging |
0.74 |
IGL01970:Kdm5b
|
APN |
1 |
134,528,465 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02183:Kdm5b
|
APN |
1 |
134,552,669 (GRCm39) |
missense |
probably benign |
0.09 |
IGL02592:Kdm5b
|
APN |
1 |
134,552,591 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02695:Kdm5b
|
APN |
1 |
134,532,223 (GRCm39) |
missense |
possibly damaging |
0.94 |
IGL02697:Kdm5b
|
APN |
1 |
134,516,511 (GRCm39) |
splice site |
probably benign |
|
IGL03036:Kdm5b
|
APN |
1 |
134,536,675 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03056:Kdm5b
|
APN |
1 |
134,515,717 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL03206:Kdm5b
|
APN |
1 |
134,555,055 (GRCm39) |
missense |
probably benign |
|
IGL03342:Kdm5b
|
APN |
1 |
134,530,314 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03388:Kdm5b
|
APN |
1 |
134,555,060 (GRCm39) |
missense |
probably benign |
|
amaryllis
|
UTSW |
1 |
134,536,799 (GRCm39) |
critical splice donor site |
probably null |
|
PIT4486001:Kdm5b
|
UTSW |
1 |
134,556,423 (GRCm39) |
missense |
probably damaging |
1.00 |
R0233:Kdm5b
|
UTSW |
1 |
134,532,372 (GRCm39) |
splice site |
probably benign |
|
R0334:Kdm5b
|
UTSW |
1 |
134,532,260 (GRCm39) |
missense |
probably damaging |
0.99 |
R0504:Kdm5b
|
UTSW |
1 |
134,548,761 (GRCm39) |
critical splice donor site |
probably null |
|
R0505:Kdm5b
|
UTSW |
1 |
134,530,309 (GRCm39) |
missense |
probably damaging |
0.96 |
R0521:Kdm5b
|
UTSW |
1 |
134,545,771 (GRCm39) |
missense |
possibly damaging |
0.65 |
R1004:Kdm5b
|
UTSW |
1 |
134,516,642 (GRCm39) |
missense |
possibly damaging |
0.71 |
R1087:Kdm5b
|
UTSW |
1 |
134,528,375 (GRCm39) |
missense |
probably damaging |
1.00 |
R1126:Kdm5b
|
UTSW |
1 |
134,541,729 (GRCm39) |
missense |
possibly damaging |
0.90 |
R1221:Kdm5b
|
UTSW |
1 |
134,526,829 (GRCm39) |
missense |
probably damaging |
0.98 |
R1230:Kdm5b
|
UTSW |
1 |
134,540,992 (GRCm39) |
missense |
probably damaging |
1.00 |
R1345:Kdm5b
|
UTSW |
1 |
134,558,288 (GRCm39) |
missense |
possibly damaging |
0.94 |
R1482:Kdm5b
|
UTSW |
1 |
134,552,635 (GRCm39) |
missense |
probably damaging |
1.00 |
R1582:Kdm5b
|
UTSW |
1 |
134,552,591 (GRCm39) |
missense |
probably damaging |
0.99 |
R1653:Kdm5b
|
UTSW |
1 |
134,530,219 (GRCm39) |
missense |
probably damaging |
1.00 |
R1693:Kdm5b
|
UTSW |
1 |
134,525,314 (GRCm39) |
splice site |
probably benign |
|
R1721:Kdm5b
|
UTSW |
1 |
134,540,919 (GRCm39) |
splice site |
probably benign |
|
R1741:Kdm5b
|
UTSW |
1 |
134,545,755 (GRCm39) |
missense |
possibly damaging |
0.82 |
R1762:Kdm5b
|
UTSW |
1 |
134,532,205 (GRCm39) |
nonsense |
probably null |
|
R1820:Kdm5b
|
UTSW |
1 |
134,525,408 (GRCm39) |
missense |
possibly damaging |
0.87 |
R1872:Kdm5b
|
UTSW |
1 |
134,552,732 (GRCm39) |
missense |
probably damaging |
1.00 |
R1966:Kdm5b
|
UTSW |
1 |
134,541,611 (GRCm39) |
splice site |
probably null |
|
R2056:Kdm5b
|
UTSW |
1 |
134,540,952 (GRCm39) |
missense |
probably benign |
0.05 |
R2059:Kdm5b
|
UTSW |
1 |
134,540,952 (GRCm39) |
missense |
probably benign |
0.05 |
R2405:Kdm5b
|
UTSW |
1 |
134,536,754 (GRCm39) |
missense |
probably damaging |
0.97 |
R3417:Kdm5b
|
UTSW |
1 |
134,515,715 (GRCm39) |
missense |
probably damaging |
1.00 |
R3771:Kdm5b
|
UTSW |
1 |
134,541,083 (GRCm39) |
missense |
probably damaging |
1.00 |
R3783:Kdm5b
|
UTSW |
1 |
134,558,280 (GRCm39) |
missense |
probably benign |
|
R3803:Kdm5b
|
UTSW |
1 |
134,543,679 (GRCm39) |
missense |
probably benign |
0.07 |
R3980:Kdm5b
|
UTSW |
1 |
134,547,408 (GRCm39) |
missense |
probably benign |
0.11 |
R3983:Kdm5b
|
UTSW |
1 |
134,559,042 (GRCm39) |
missense |
possibly damaging |
0.91 |
R4013:Kdm5b
|
UTSW |
1 |
134,555,067 (GRCm39) |
missense |
possibly damaging |
0.86 |
R4162:Kdm5b
|
UTSW |
1 |
134,552,899 (GRCm39) |
missense |
probably benign |
0.01 |
R4701:Kdm5b
|
UTSW |
1 |
134,533,750 (GRCm39) |
intron |
probably benign |
|
R4791:Kdm5b
|
UTSW |
1 |
134,558,538 (GRCm39) |
missense |
possibly damaging |
0.82 |
R4836:Kdm5b
|
UTSW |
1 |
134,521,053 (GRCm39) |
splice site |
probably null |
|
R4924:Kdm5b
|
UTSW |
1 |
134,559,089 (GRCm39) |
missense |
probably benign |
0.00 |
R5135:Kdm5b
|
UTSW |
1 |
134,516,484 (GRCm39) |
intron |
probably benign |
|
R5248:Kdm5b
|
UTSW |
1 |
134,548,735 (GRCm39) |
missense |
probably benign |
0.11 |
R5290:Kdm5b
|
UTSW |
1 |
134,549,837 (GRCm39) |
splice site |
probably null |
|
R5358:Kdm5b
|
UTSW |
1 |
134,535,432 (GRCm39) |
nonsense |
probably null |
|
R5388:Kdm5b
|
UTSW |
1 |
134,536,635 (GRCm39) |
nonsense |
probably null |
|
R5397:Kdm5b
|
UTSW |
1 |
134,549,836 (GRCm39) |
splice site |
probably null |
|
R5398:Kdm5b
|
UTSW |
1 |
134,549,836 (GRCm39) |
splice site |
probably null |
|
R5399:Kdm5b
|
UTSW |
1 |
134,549,836 (GRCm39) |
splice site |
probably null |
|
R5529:Kdm5b
|
UTSW |
1 |
134,515,741 (GRCm39) |
missense |
probably damaging |
1.00 |
R5540:Kdm5b
|
UTSW |
1 |
134,558,979 (GRCm39) |
missense |
probably damaging |
0.98 |
R5661:Kdm5b
|
UTSW |
1 |
134,526,811 (GRCm39) |
missense |
probably benign |
0.01 |
R5663:Kdm5b
|
UTSW |
1 |
134,558,373 (GRCm39) |
missense |
probably benign |
|
R5822:Kdm5b
|
UTSW |
1 |
134,516,511 (GRCm39) |
splice site |
probably benign |
|
R6226:Kdm5b
|
UTSW |
1 |
134,536,616 (GRCm39) |
missense |
probably damaging |
0.99 |
R6368:Kdm5b
|
UTSW |
1 |
134,526,945 (GRCm39) |
missense |
probably damaging |
1.00 |
R6681:Kdm5b
|
UTSW |
1 |
134,541,007 (GRCm39) |
missense |
possibly damaging |
0.90 |
R6715:Kdm5b
|
UTSW |
1 |
134,536,799 (GRCm39) |
critical splice donor site |
probably null |
|
R7132:Kdm5b
|
UTSW |
1 |
134,526,844 (GRCm39) |
missense |
probably damaging |
1.00 |
R7202:Kdm5b
|
UTSW |
1 |
134,552,497 (GRCm39) |
missense |
probably benign |
|
R7258:Kdm5b
|
UTSW |
1 |
134,548,759 (GRCm39) |
missense |
probably damaging |
1.00 |
R7335:Kdm5b
|
UTSW |
1 |
134,488,177 (GRCm39) |
missense |
probably damaging |
1.00 |
R7420:Kdm5b
|
UTSW |
1 |
134,532,235 (GRCm39) |
missense |
probably benign |
0.14 |
R7426:Kdm5b
|
UTSW |
1 |
134,523,571 (GRCm39) |
missense |
probably benign |
0.02 |
R7452:Kdm5b
|
UTSW |
1 |
134,552,686 (GRCm39) |
missense |
probably damaging |
1.00 |
R7595:Kdm5b
|
UTSW |
1 |
134,536,704 (GRCm39) |
missense |
probably benign |
0.00 |
R7612:Kdm5b
|
UTSW |
1 |
134,552,656 (GRCm39) |
nonsense |
probably null |
|
R7704:Kdm5b
|
UTSW |
1 |
134,515,669 (GRCm39) |
missense |
probably damaging |
1.00 |
R7846:Kdm5b
|
UTSW |
1 |
134,545,578 (GRCm39) |
missense |
probably damaging |
1.00 |
R8115:Kdm5b
|
UTSW |
1 |
134,547,411 (GRCm39) |
missense |
possibly damaging |
0.83 |
R8146:Kdm5b
|
UTSW |
1 |
134,552,864 (GRCm39) |
missense |
probably benign |
0.05 |
R8160:Kdm5b
|
UTSW |
1 |
134,541,657 (GRCm39) |
missense |
probably damaging |
1.00 |
R8527:Kdm5b
|
UTSW |
1 |
134,533,512 (GRCm39) |
missense |
possibly damaging |
0.78 |
R8542:Kdm5b
|
UTSW |
1 |
134,533,512 (GRCm39) |
missense |
possibly damaging |
0.78 |
R8930:Kdm5b
|
UTSW |
1 |
134,544,010 (GRCm39) |
missense |
probably damaging |
1.00 |
R8932:Kdm5b
|
UTSW |
1 |
134,544,010 (GRCm39) |
missense |
probably damaging |
1.00 |
R8950:Kdm5b
|
UTSW |
1 |
134,541,664 (GRCm39) |
missense |
possibly damaging |
0.84 |
R9089:Kdm5b
|
UTSW |
1 |
134,535,506 (GRCm39) |
missense |
probably damaging |
0.98 |
R9109:Kdm5b
|
UTSW |
1 |
134,528,493 (GRCm39) |
critical splice donor site |
probably null |
|
R9133:Kdm5b
|
UTSW |
1 |
134,530,323 (GRCm39) |
missense |
probably benign |
|
R9298:Kdm5b
|
UTSW |
1 |
134,528,493 (GRCm39) |
critical splice donor site |
probably null |
|
R9423:Kdm5b
|
UTSW |
1 |
134,515,705 (GRCm39) |
missense |
possibly damaging |
0.85 |
R9630:Kdm5b
|
UTSW |
1 |
134,512,971 (GRCm39) |
critical splice donor site |
probably null |
|
R9670:Kdm5b
|
UTSW |
1 |
134,558,240 (GRCm39) |
nonsense |
probably null |
|
X0063:Kdm5b
|
UTSW |
1 |
134,516,614 (GRCm39) |
missense |
probably benign |
0.07 |
Z1176:Kdm5b
|
UTSW |
1 |
134,552,773 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1177:Kdm5b
|
UTSW |
1 |
134,523,536 (GRCm39) |
frame shift |
probably null |
|
|
Predicted Primers |
PCR Primer
(F):5'- GAAGTCTGTTTCACCATTGGC -3'
(R):5'- CTCATTAATGCCAGGCAAGGG -3'
Sequencing Primer
(F):5'- GGCTCTGTTTTCTCTTACATTAGG -3'
(R):5'- AGGCAAGGGCTTTACCACTG -3'
|
Posted On |
2016-09-06 |