Incidental Mutation 'R5489:Clec2f'
ID 431977
Institutional Source Beutler Lab
Gene Symbol Clec2f
Ensembl Gene ENSMUSG00000089728
Gene Name C-type lectin domain family 2, member f
Synonyms Clrc, Clrz, Clec2f-ps
MMRRC Submission 043050-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.129) question?
Stock # R5489 (G1)
Quality Score 225
Status Validated
Chromosome 6
Chromosomal Location 128991075-128997490 bp(+) (GRCm39)
Type of Mutation exon
DNA Base Change (assembly) T to C at 128997449 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Gene Model predicted gene model for transcript(s):
AlphaFold no structure available at present
Predicted Effect noncoding transcript
Transcript: ENSMUST00000121051
Predicted Effect noncoding transcript
Transcript: ENSMUST00000204981
Coding Region Coverage
  • 1x: 98.4%
  • 3x: 97.4%
  • 10x: 95.4%
  • 20x: 91.6%
Validation Efficiency 95% (57/60)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] CLEC2A belongs to the CLEC2 family of activation-induced, natural killer gene complex-encoded C-type lectin-like receptors (Spreu et al., 2007 [PubMed 18046548]).[supplied by OMIM, May 2008]
Allele List at MGI
Other mutations in this stock
Total: 50 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
5730455P16Rik A T 11: 80,268,778 (GRCm39) M1K probably null Het
Abca14 T A 7: 119,851,473 (GRCm39) V817D probably damaging Het
Aqr T C 2: 113,963,554 (GRCm39) N632S probably damaging Het
Bms1 T C 6: 118,390,706 (GRCm39) T208A possibly damaging Het
Brd8 A T 18: 34,741,698 (GRCm39) probably null Het
Caln1 G T 5: 130,443,673 (GRCm39) R2L possibly damaging Het
Cdk17 A G 10: 93,068,274 (GRCm39) T344A probably damaging Het
Chd8 A T 14: 52,450,505 (GRCm39) probably benign Het
Clec14a A G 12: 58,315,035 (GRCm39) F196L probably damaging Het
Col4a1 A T 8: 11,362,550 (GRCm39) probably benign Het
Col9a3 G A 2: 180,258,318 (GRCm39) R579H probably damaging Het
Cyb561 A G 11: 105,826,349 (GRCm39) V202A probably benign Het
Cyp2c69 T G 19: 39,839,603 (GRCm39) Q340P probably null Het
D630003M21Rik T A 2: 158,058,941 (GRCm39) T320S probably benign Het
D630045J12Rik A T 6: 38,173,782 (GRCm39) S129T possibly damaging Het
Ddx54 A G 5: 120,762,786 (GRCm39) T636A probably benign Het
Dnah8 T G 17: 31,009,930 (GRCm39) F3774V probably damaging Het
Ern1 A G 11: 106,298,355 (GRCm39) S674P probably damaging Het
Fam13a A T 6: 59,001,303 (GRCm39) L8Q probably null Het
Fam83b T C 9: 76,452,881 (GRCm39) N62S probably benign Het
Foxred1 A T 9: 35,121,266 (GRCm39) V94E probably damaging Het
Frmd8 T A 19: 5,902,680 (GRCm39) Q457L probably damaging Het
Gvin3 T A 7: 106,200,797 (GRCm39) noncoding transcript Het
Heatr6 A G 11: 83,665,258 (GRCm39) E741G probably damaging Het
Hnrnpab A G 11: 51,495,640 (GRCm39) L133S probably damaging Het
Itga2 A T 13: 114,979,971 (GRCm39) W1077R probably damaging Het
Kat6b A G 14: 21,719,332 (GRCm39) D1228G probably damaging Het
Klk14 G A 7: 43,341,501 (GRCm39) C51Y probably damaging Het
Kmt2a A T 9: 44,752,335 (GRCm39) probably benign Het
Leap2 T G 11: 53,313,240 (GRCm39) *77C probably null Het
Mmp20 A G 9: 7,643,958 (GRCm39) probably null Het
Mrps9 T G 1: 42,937,593 (GRCm39) probably benign Het
Muc2 T C 7: 141,305,169 (GRCm39) S158P probably benign Het
Mus81 T C 19: 5,537,917 (GRCm39) probably benign Het
Nrip3 T C 7: 109,361,045 (GRCm39) T210A probably damaging Het
Or52s1b T C 7: 102,822,658 (GRCm39) Y62C probably damaging Het
Padi2 T C 4: 140,671,799 (GRCm39) F509S probably damaging Het
Pcdha12 A G 18: 37,155,260 (GRCm39) T660A probably benign Het
Pdzd2 G A 15: 12,382,762 (GRCm39) P1197L probably benign Het
Rec8 A T 14: 55,860,283 (GRCm39) Q291L probably benign Het
Robo4 CGG CG 9: 37,322,786 (GRCm39) probably null Het
Sart3 A G 5: 113,909,441 (GRCm39) W86R probably damaging Het
Slc17a4 A G 13: 24,082,825 (GRCm39) probably null Het
Tdpoz1 T A 3: 93,577,974 (GRCm39) Y270F possibly damaging Het
Thap3 T A 4: 152,070,109 (GRCm39) probably benign Het
Tmem45a T A 16: 56,646,074 (GRCm39) probably null Het
Trim43a A T 9: 88,464,229 (GRCm39) I47F probably damaging Het
Vps13b A T 15: 35,770,688 (GRCm39) I2044L probably benign Het
Zfp735 G A 11: 73,601,419 (GRCm39) W121* probably null Het
Zmym2 A G 14: 57,193,712 (GRCm39) K1176E possibly damaging Het
Other mutations in Clec2f
AlleleSourceChrCoordTypePredicted EffectPPH Score
R4508:Clec2f UTSW 6 128,997,474 (GRCm39) exon noncoding transcript
Predicted Primers PCR Primer
(F):5'- ATTCCAGTGGACTCTGTTTCTG -3'
(R):5'- TCCTCAGAGAGTTGTCATCTTTG -3'

Sequencing Primer
(F):5'- AGTGGACTCTGTTTCTGATTCATATC -3'
(R):5'- CTCAGAGAGTTGTCATCTTTGATATC -3'
Posted On 2016-10-05