Incidental Mutation 'R5308:Garre1'
ID 434478
Institutional Source Beutler Lab
Gene Symbol Garre1
Ensembl Gene ENSMUSG00000066571
Gene Name granule associated Rac and RHOG effector 1
Synonyms 4931406P16Rik
MMRRC Submission 042891-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R5308 (G1)
Quality Score 225
Status Not validated
Chromosome 7
Chromosomal Location 33936132-34012976 bp(-) (GRCm39)
Type of Mutation nonsense
DNA Base Change (assembly) T to A at 33945180 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Lysine to Stop codon at position 355 (K355*)
Ref Sequence ENSEMBL: ENSMUSP00000145762 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000085592] [ENSMUST00000108074] [ENSMUST00000205264] [ENSMUST00000206399]
AlphaFold Q8C5X1
Predicted Effect probably null
Transcript: ENSMUST00000085592
AA Change: K567*
SMART Domains Protein: ENSMUSP00000082730
Gene: ENSMUSG00000066571
AA Change: K567*

DomainStartEndE-ValueType
low complexity region 40 57 N/A INTRINSIC
Pfam:DUF4745 59 187 1.3e-57 PFAM
low complexity region 319 332 N/A INTRINSIC
low complexity region 592 602 N/A INTRINSIC
low complexity region 677 696 N/A INTRINSIC
low complexity region 699 729 N/A INTRINSIC
low complexity region 771 786 N/A INTRINSIC
low complexity region 856 868 N/A INTRINSIC
low complexity region 890 913 N/A INTRINSIC
low complexity region 940 951 N/A INTRINSIC
low complexity region 1026 1049 N/A INTRINSIC
Predicted Effect probably null
Transcript: ENSMUST00000108074
AA Change: K567*
SMART Domains Protein: ENSMUSP00000103709
Gene: ENSMUSG00000066571
AA Change: K567*

DomainStartEndE-ValueType
low complexity region 40 57 N/A INTRINSIC
low complexity region 319 332 N/A INTRINSIC
low complexity region 592 602 N/A INTRINSIC
low complexity region 677 696 N/A INTRINSIC
low complexity region 699 729 N/A INTRINSIC
low complexity region 771 786 N/A INTRINSIC
low complexity region 856 868 N/A INTRINSIC
low complexity region 890 913 N/A INTRINSIC
low complexity region 940 951 N/A INTRINSIC
low complexity region 1026 1049 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000205264
Predicted Effect noncoding transcript
Transcript: ENSMUST00000206245
Predicted Effect probably null
Transcript: ENSMUST00000206399
AA Change: K355*
Predicted Effect noncoding transcript
Transcript: ENSMUST00000207005
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 97.7%
  • 10x: 95.4%
  • 20x: 91.2%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 65 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700006A11Rik C G 3: 124,199,999 (GRCm39) G531A probably damaging Het
4921504E06Rik T C 2: 19,528,892 (GRCm39) D163G probably damaging Het
Abcd4 C T 12: 84,650,067 (GRCm39) probably null Het
Alg9 T C 9: 50,734,011 (GRCm39) S570P possibly damaging Het
Angptl3 C A 4: 98,922,723 (GRCm39) H255N probably benign Het
Ank3 G A 10: 69,838,395 (GRCm39) R1566K possibly damaging Het
Cdc37 A T 9: 21,052,060 (GRCm39) D326E probably benign Het
Cdk13 T C 13: 17,946,898 (GRCm39) K6R probably damaging Het
Ces1b T C 8: 93,793,645 (GRCm39) K315E probably benign Het
Cfap61 G A 2: 145,951,908 (GRCm39) G190S probably damaging Het
Cimap3 T C 3: 105,908,419 (GRCm39) T107A probably benign Het
Ckap4 T C 10: 84,364,238 (GRCm39) E275G probably benign Het
Cplane1 G A 15: 8,290,174 (GRCm39) probably null Het
Csf3r A G 4: 125,929,137 (GRCm39) D349G probably benign Het
Cyp2d37-ps T C 15: 82,574,012 (GRCm39) noncoding transcript Het
Dmbt1 T A 7: 130,642,751 (GRCm39) C190S probably damaging Het
Dnah11 A G 12: 118,049,415 (GRCm39) F1670L possibly damaging Het
Dnah5 A T 15: 28,229,797 (GRCm39) I144F possibly damaging Het
Eno2 C A 6: 124,744,056 (GRCm39) V84L probably damaging Het
Ercc4 G T 16: 12,948,028 (GRCm39) R325L probably damaging Het
Fcgr2b T G 1: 170,793,279 (GRCm39) Q250P probably benign Het
Garin5a T C 7: 44,149,606 (GRCm39) V109A probably damaging Het
Gcfc2 T C 6: 81,920,524 (GRCm39) probably null Het
Glb1l2 C T 9: 26,676,055 (GRCm39) G509D probably damaging Het
Gm11595 G A 11: 99,663,381 (GRCm39) R100C unknown Het
Grn A G 11: 102,327,018 (GRCm39) N160D possibly damaging Het
Hexd T A 11: 121,113,095 (GRCm39) V510D probably damaging Het
Igfbp1 G A 11: 7,149,919 (GRCm39) probably null Het
Itga11 T A 9: 62,663,051 (GRCm39) M589K probably benign Het
Itpr1 A T 6: 108,333,472 (GRCm39) S51C probably damaging Het
Klra3 T C 6: 130,311,270 (GRCm39) probably null Het
Mad2l1 T C 6: 66,514,675 (GRCm39) probably null Het
Matn3 CGGGGCTCGGGGGC CGGGGC 12: 9,002,308 (GRCm39) probably null Het
Myo9a T A 9: 59,771,244 (GRCm39) Y939N probably damaging Het
Nxpe3 C T 16: 55,686,834 (GRCm39) S58N probably benign Het
Or1j16 T A 2: 36,530,706 (GRCm39) Y218* probably null Het
Or3a1c T A 11: 74,046,397 (GRCm39) M139K probably damaging Het
Or4c103 T C 2: 88,513,749 (GRCm39) E109G probably benign Het
Or4k45 C T 2: 111,394,899 (GRCm39) A297T probably damaging Het
Paics T C 5: 77,104,479 (GRCm39) S35P probably damaging Het
Pcnt A C 10: 76,192,159 (GRCm39) Y2717* probably null Het
Plekho2 T A 9: 65,465,957 (GRCm39) N144Y probably damaging Het
Plscr5 T C 9: 92,080,565 (GRCm39) F17S possibly damaging Het
Prrc2a C T 17: 35,380,023 (GRCm39) R192H unknown Het
Rbm27 T A 18: 42,460,275 (GRCm39) M735K probably damaging Het
Rfc1 T A 5: 65,436,804 (GRCm39) K625N probably damaging Het
Ric8b T A 10: 84,783,611 (GRCm39) F156L probably benign Het
Romo1 C A 2: 155,986,473 (GRCm39) A32E possibly damaging Het
Rpl26 T A 11: 68,795,284 (GRCm39) Y135N probably damaging Het
Sacs T C 14: 61,429,849 (GRCm39) V636A probably benign Het
Scyl2 A T 10: 89,477,869 (GRCm39) I710N probably benign Het
Sh3bp5 C A 14: 31,099,452 (GRCm39) R265L probably benign Het
Slc4a1 T A 11: 102,249,903 (GRCm39) I154F probably damaging Het
Snx11 A G 11: 96,661,535 (GRCm39) S157P probably damaging Het
Snx18 G A 13: 113,753,383 (GRCm39) Q517* probably null Het
Stard4 G T 18: 33,336,678 (GRCm39) N212K probably damaging Het
Strn3 A G 12: 51,676,168 (GRCm39) Y454H probably damaging Het
Stx17 A T 4: 48,182,851 (GRCm39) probably benign Het
Tas2r121 G A 6: 132,677,480 (GRCm39) T164I possibly damaging Het
Tbc1d8 T C 1: 39,428,490 (GRCm39) Y485C probably damaging Het
Tmem45b T C 9: 31,340,380 (GRCm39) M8V probably damaging Het
Usp28 T C 9: 48,948,501 (GRCm39) F844L probably damaging Het
Usp32 T A 11: 84,908,544 (GRCm39) N1054I probably benign Het
Xpa T A 4: 46,185,659 (GRCm39) E106D probably benign Het
Zfp85 C T 13: 67,896,974 (GRCm39) C366Y probably damaging Het
Other mutations in Garre1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00089:Garre1 APN 7 33,945,412 (GRCm39) splice site probably benign
IGL00160:Garre1 APN 7 33,938,431 (GRCm39) missense possibly damaging 0.88
IGL00691:Garre1 APN 7 33,944,910 (GRCm39) missense probably damaging 1.00
IGL01312:Garre1 APN 7 33,955,933 (GRCm39) missense probably benign 0.19
IGL01954:Garre1 APN 7 33,944,460 (GRCm39) missense probably damaging 1.00
IGL02016:Garre1 APN 7 33,938,526 (GRCm39) missense possibly damaging 0.74
IGL02390:Garre1 APN 7 33,947,643 (GRCm39) missense probably damaging 1.00
IGL02407:Garre1 APN 7 33,955,909 (GRCm39) missense probably damaging 0.99
IGL02677:Garre1 APN 7 33,941,834 (GRCm39) splice site probably benign
IGL02929:Garre1 APN 7 33,944,507 (GRCm39) missense possibly damaging 0.46
IGL03285:Garre1 APN 7 33,984,416 (GRCm39) missense possibly damaging 0.81
I1329:Garre1 UTSW 7 33,944,619 (GRCm39) missense probably benign 0.00
R0004:Garre1 UTSW 7 33,955,853 (GRCm39) missense probably damaging 0.99
R0100:Garre1 UTSW 7 33,953,436 (GRCm39) missense possibly damaging 0.95
R0100:Garre1 UTSW 7 33,953,436 (GRCm39) missense possibly damaging 0.95
R0135:Garre1 UTSW 7 33,945,382 (GRCm39) missense probably damaging 1.00
R0137:Garre1 UTSW 7 33,938,644 (GRCm39) missense probably damaging 1.00
R0556:Garre1 UTSW 7 33,939,222 (GRCm39) missense probably damaging 0.99
R0687:Garre1 UTSW 7 33,944,843 (GRCm39) missense possibly damaging 0.95
R0928:Garre1 UTSW 7 33,947,671 (GRCm39) splice site probably null
R1719:Garre1 UTSW 7 33,947,631 (GRCm39) missense probably damaging 0.98
R1908:Garre1 UTSW 7 33,957,461 (GRCm39) missense probably benign 0.14
R1909:Garre1 UTSW 7 33,957,461 (GRCm39) missense probably benign 0.14
R1976:Garre1 UTSW 7 33,956,805 (GRCm39) missense probably damaging 0.99
R2496:Garre1 UTSW 7 33,955,916 (GRCm39) missense possibly damaging 0.93
R3005:Garre1 UTSW 7 33,984,209 (GRCm39) missense probably damaging 1.00
R4666:Garre1 UTSW 7 33,984,198 (GRCm39) missense probably damaging 0.98
R4832:Garre1 UTSW 7 33,938,333 (GRCm39) utr 3 prime probably benign
R4870:Garre1 UTSW 7 33,984,312 (GRCm39) missense possibly damaging 0.83
R4989:Garre1 UTSW 7 33,945,225 (GRCm39) missense probably damaging 1.00
R5033:Garre1 UTSW 7 33,945,237 (GRCm39) missense probably benign
R5366:Garre1 UTSW 7 33,941,713 (GRCm39) missense possibly damaging 0.74
R5386:Garre1 UTSW 7 33,941,813 (GRCm39) missense probably damaging 0.99
R5688:Garre1 UTSW 7 33,953,416 (GRCm39) missense possibly damaging 0.74
R5688:Garre1 UTSW 7 33,984,134 (GRCm39) missense probably damaging 0.99
R5714:Garre1 UTSW 7 33,939,941 (GRCm39) nonsense probably null
R5733:Garre1 UTSW 7 33,944,505 (GRCm39) missense probably damaging 0.99
R5772:Garre1 UTSW 7 33,953,413 (GRCm39) missense probably damaging 0.97
R6059:Garre1 UTSW 7 33,944,888 (GRCm39) missense possibly damaging 0.90
R6211:Garre1 UTSW 7 33,938,429 (GRCm39) missense possibly damaging 0.95
R6276:Garre1 UTSW 7 33,941,802 (GRCm39) nonsense probably null
R6477:Garre1 UTSW 7 33,957,055 (GRCm39) critical splice donor site probably null
R6757:Garre1 UTSW 7 33,938,502 (GRCm39) missense possibly damaging 0.89
R6912:Garre1 UTSW 7 33,945,093 (GRCm39) missense probably benign
R7156:Garre1 UTSW 7 33,945,133 (GRCm39) missense possibly damaging 0.80
R7317:Garre1 UTSW 7 33,963,072 (GRCm39) missense probably benign
R7431:Garre1 UTSW 7 33,984,219 (GRCm39) missense possibly damaging 0.73
R7452:Garre1 UTSW 7 33,945,096 (GRCm39) missense probably benign
R7996:Garre1 UTSW 7 33,963,024 (GRCm39) missense possibly damaging 0.77
R8348:Garre1 UTSW 7 33,984,569 (GRCm39) missense probably damaging 1.00
R8448:Garre1 UTSW 7 33,984,569 (GRCm39) missense probably damaging 1.00
R8989:Garre1 UTSW 7 33,956,869 (GRCm39) missense probably damaging 0.99
R9010:Garre1 UTSW 7 33,938,491 (GRCm39) missense probably benign 0.01
R9095:Garre1 UTSW 7 33,956,770 (GRCm39) critical splice donor site probably null
R9505:Garre1 UTSW 7 33,984,371 (GRCm39) missense probably damaging 1.00
R9530:Garre1 UTSW 7 33,963,069 (GRCm39) missense probably benign 0.01
R9612:Garre1 UTSW 7 33,947,656 (GRCm39) missense probably damaging 1.00
RF019:Garre1 UTSW 7 33,939,974 (GRCm39) missense probably damaging 0.98
X0021:Garre1 UTSW 7 33,944,788 (GRCm39) missense possibly damaging 0.94
Z1177:Garre1 UTSW 7 33,984,180 (GRCm39) missense probably damaging 0.96
Z1186:Garre1 UTSW 7 33,945,185 (GRCm39) missense probably benign
Z1186:Garre1 UTSW 7 33,938,583 (GRCm39) missense probably benign 0.03
Z1186:Garre1 UTSW 7 33,938,533 (GRCm39) missense probably benign
Z1191:Garre1 UTSW 7 33,945,185 (GRCm39) missense probably benign
Z1191:Garre1 UTSW 7 33,938,583 (GRCm39) missense probably benign 0.03
Z1191:Garre1 UTSW 7 33,938,533 (GRCm39) missense probably benign
Predicted Primers PCR Primer
(F):5'- GGGTAAGTTCATGCCCTTCTC -3'
(R):5'- CCCTGTATACAGATCCAGCTGC -3'

Sequencing Primer
(F):5'- GTAAGTTCATGCCCTTCTCATCCTTG -3'
(R):5'- TCCAGCTGCAAAGGGATATCTGC -3'
Posted On 2016-10-06